RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ARHGEF11O15085 1522 aa28.95■■■□□ 2.23
ERCC3-207ENST00000490062 FAM9AQ8IZU1 332 aaPredicted RBP28.91■■■□□ 2.22
ERCC3-207ENST00000490062 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
ERCC3-207ENST00000490062 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
ERCC3-207ENST00000490062 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
ERCC3-207ENST00000490062 JPH4Q96JJ6 628 aa28.88■■■□□ 2.21
ERCC3-207ENST00000490062 IQGAP2Q13576 1575 aa28.88■■■□□ 2.21
ERCC3-207ENST00000490062 CTTNBP2Q8WZ74 1663 aa28.85■■■□□ 2.21
ERCC3-207ENST00000490062 UGGT2Q9NYU1 1516 aa28.79■■■□□ 2.2
ERCC3-207ENST00000490062 PRG4Q92954 1404 aaPredicted RBP28.78■■■□□ 2.2
ERCC3-207ENST00000490062 GOLGA3Q08378 1498 aa28.78■■■□□ 2.2
ERCC3-207ENST00000490062 ERCC6L2Q5T890 1561 aa28.75■■■□□ 2.19
ERCC3-207ENST00000490062 ARAP1Q96P48 1450 aa28.75■■■□□ 2.19
ERCC3-207ENST00000490062 DISP1Q96F81 1524 aa28.67■■■□□ 2.18
ERCC3-207ENST00000490062 CARMIL2Q6F5E8 1435 aa28.67■■■□□ 2.18
ERCC3-207ENST00000490062 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
ERCC3-207ENST00000490062 TNIKQ9UKE5 1360 aa28.57■■■□□ 2.16
ERCC3-207ENST00000490062 CYB5RLQ6IPT4 315 aa28.56■■■□□ 2.16
ERCC3-207ENST00000490062 SAMD9Q5K651 1589 aa28.55■■■□□ 2.16
ERCC3-207ENST00000490062 UBTFP17480 764 aaKnown RBP28.54■■■□□ 2.16
ERCC3-207ENST00000490062 PTPRGP23470 1445 aa28.49■■■□□ 2.15
ERCC3-207ENST00000490062 EFCAB5A4FU69 1503 aa28.48■■■□□ 2.15
ERCC3-207ENST00000490062 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
ERCC3-207ENST00000490062 UHRF1BP1LA0JNW5 1464 aa28.37■■■□□ 2.13
ERCC3-207ENST00000490062 UACAQ9BZF9 1416 aa28.35■■■□□ 2.13
ERCC3-207ENST00000490062 ARHGAP35Q9NRY4 1499 aa28.34■■■□□ 2.13
ERCC3-207ENST00000490062 ADCY10Q96PN6 1610 aa28.33■■■□□ 2.13
ERCC3-207ENST00000490062 ABCA8O94911 1581 aa28.3■■■□□ 2.12
ERCC3-207ENST00000490062 ABCC2Q92887 1545 aa28.3■■■□□ 2.12
ERCC3-207ENST00000490062 FHOD3Q2V2M9 1422 aa28.28■■■□□ 2.12
ERCC3-207ENST00000490062 P3H3Q8IVL6 736 aa28.26■■■□□ 2.11
ERCC3-207ENST00000490062 PLB1Q6P1J6 1458 aa28.25■■■□□ 2.11
ERCC3-207ENST00000490062 LOC105371045A0A1W2PR82 267 aa28.24■■■□□ 2.11
ERCC3-207ENST00000490062 CLIP1P30622 1438 aa28.23■■■□□ 2.11
ERCC3-207ENST00000490062 RANGAP1P46060 587 aaPredicted RBP28.22■■■□□ 2.11
ERCC3-207ENST00000490062 KDM5BQ9UGL1 1544 aa28.22■■■□□ 2.11
ERCC3-207ENST00000490062 FMN1Q68DA7 1419 aa28.19■■■□□ 2.1
ERCC3-207ENST00000490062 TTBK1Q5TCY1 1321 aaPredicted RBP28.18■■■□□ 2.1
ERCC3-207ENST00000490062 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
ERCC3-207ENST00000490062 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
ERCC3-207ENST00000490062 RAPGEF6Q8TEU7 1601 aa28.17■■■□□ 2.1
ERCC3-207ENST00000490062 NPM1P06748 294 aaKnown RBP eCLIP28.13■■■□□ 2.09
ERCC3-207ENST00000490062 ZCCHC11Q5TAX3 1644 aaKnown RBP28.08■■■□□ 2.09
ERCC3-207ENST00000490062 NUP153P49790 1475 aaKnown RBP28.08■■■□□ 2.09
ERCC3-207ENST00000490062 ATP10BO94823 1461 aa28.03■■■□□ 2.08
ERCC3-207ENST00000490062 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
ERCC3-207ENST00000490062 HECW1Q76N89 1606 aa28■■■□□ 2.07
ERCC3-207ENST00000490062 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
ERCC3-207ENST00000490062 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
ERCC3-207ENST00000490062 FYCO1Q9BQS8 1478 aa27.96■■■□□ 2.07
ERCC3-207ENST00000490062 PCF11O94913 1555 aaKnown RBP27.94■■■□□ 2.06
ERCC3-207ENST00000490062 WDR7Q9Y4E6 1490 aa27.93■■■□□ 2.06
ERCC3-207ENST00000490062 EPRSP07814 1512 aaKnown RBP27.92■■■□□ 2.06
ERCC3-207ENST00000490062 DIP2BQ9P265 1576 aa27.91■■■□□ 2.06
ERCC3-207ENST00000490062 GLI2P10070 1586 aa27.89■■■□□ 2.05
ERCC3-207ENST00000490062 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
ERCC3-207ENST00000490062 CCDC18Q5T9S5 1454 aa27.87■■■□□ 2.05
ERCC3-207ENST00000490062 VPS8Q8N3P4 1428 aa27.86■■■□□ 2.05
ERCC3-207ENST00000490062 LRRIQ1Q96JM4 1722 aa27.84■■■□□ 2.05
ERCC3-207ENST00000490062 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
ERCC3-207ENST00000490062 TRHP20396 242 aaPredicted RBP27.81■■■□□ 2.04
ERCC3-207ENST00000490062 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
ERCC3-207ENST00000490062 FAM69CQ0P6D2 419 aa27.78■■■□□ 2.04
ERCC3-207ENST00000490062 PLEKHD1A6NEE1 506 aa27.77■■■□□ 2.04
ERCC3-207ENST00000490062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.75■■■□□ 2.03
ERCC3-207ENST00000490062 HNRNPUL2Q1KMD3 747 aaKnown RBP27.75■■■□□ 2.03
ERCC3-207ENST00000490062 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
ERCC3-207ENST00000490062 CDK11AQ9UQ88 783 aaPredicted RBP27.75■■■□□ 2.03
ERCC3-207ENST00000490062 MAP3K4Q9Y6R4 1608 aa27.72■■■□□ 2.03
ERCC3-207ENST00000490062 TROQ12816 1431 aaPredicted RBP27.71■■■□□ 2.03
ERCC3-207ENST00000490062 ABCA9Q8IUA7 1624 aa27.7■■■□□ 2.03
ERCC3-207ENST00000490062 CFAP43Q8NDM7 1665 aa27.69■■■□□ 2.02
ERCC3-207ENST00000490062 MAP3K1Q13233 1512 aa27.68■■■□□ 2.02
ERCC3-207ENST00000490062 MAGI3Q5TCQ9 1506 aa27.64■■■□□ 2.02
ERCC3-207ENST00000490062 KCNH8Q96L42 1107 aa27.64■■■□□ 2.02
ERCC3-207ENST00000490062 PPRC1Q5VV67 1664 aaKnown RBP27.62■■■□□ 2.01
ERCC3-207ENST00000490062 TIAM1Q13009 1591 aa27.61■■■□□ 2.01
ERCC3-207ENST00000490062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
ERCC3-207ENST00000490062 CD109Q6YHK3 1445 aa27.6■■■□□ 2.01
ERCC3-207ENST00000490062 KIF14Q15058 1648 aa27.59■■■□□ 2.01
ERCC3-207ENST00000490062 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
ERCC3-207ENST00000490062 EHBP1L1Q8N3D4 1523 aa27.56■■■□□ 2
ERCC3-207ENST00000490062 TTC37Q6PGP7 1564 aa27.54■■■□□ 2
ERCC3-207ENST00000490062 TSPOAP1O95153 1857 aa27.53■■■□□ 2
ERCC3-207ENST00000490062 ARAP3Q8WWN8 1544 aa27.52■■■□□ 2
ERCC3-207ENST00000490062 MTUS2Q5JR59 1369 aa27.52■■■□□ 2
ERCC3-207ENST00000490062 LRRC9Q6ZRR7 1453 aa27.49■■□□□ 1.99
ERCC3-207ENST00000490062 PLCH2O75038 1416 aa27.48■■□□□ 1.99
ERCC3-207ENST00000490062 PHLDB1Q86UU1 1377 aa27.48■■□□□ 1.99
ERCC3-207ENST00000490062 NEO1Q92859 1461 aa27.45■■□□□ 1.99
ERCC3-207ENST00000490062 MYO5CQ9NQX4 1742 aa27.44■■□□□ 1.98
ERCC3-207ENST00000490062 APLP2Q06481 763 aa27.41■■□□□ 1.98
ERCC3-207ENST00000490062 CFAP74Q9C0B2 1584 aa27.4■■□□□ 1.98
ERCC3-207ENST00000490062 SUPT6HQ7KZ85 1726 aaKnown RBP27.4■■□□□ 1.98
ERCC3-207ENST00000490062 PREX2Q70Z35 1606 aa27.39■■□□□ 1.98
ERCC3-207ENST00000490062 FANCAO15360 1455 aa27.38■■□□□ 1.97
ERCC3-207ENST00000490062 KANK4Q5T7N3 995 aaPredicted RBP27.37■■□□□ 1.97
ERCC3-207ENST00000490062 CDC42BPAQ5VT25 1732 aa27.37■■□□□ 1.97
ERCC3-207ENST00000490062 GPATCH8Q9UKJ3 1502 aaKnown RBP27.36■■□□□ 1.97
ERCC3-207ENST00000490062 NCOA2Q15596 1464 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms