RNA–Protein interactions for RNA: ENST00000485002.6

MEGF6-205, Transcript of multiple EGF like domains 6, humanhuman

TSL 5

Gene MEGF6, Length 4,705 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEGF6-205ENST00000485002 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.77■□□□□ 0.445e-7■■■■■ 357.5
MEGF6-205ENST00000485002 SF3B1O75533 1304 aaKnown RBP eCLIP15.65■□□□□ 0.14e-6■■■■■ 260.3
MEGF6-205ENST00000485002 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.94■□□□□ 0.31e-8■■■■■ 76
MEGF6-205ENST00000485002 EWSR1Q01844 656 aaKnown RBP eCLIP13.88□□□□□ -0.192e-6■■■■■ 71.7
MEGF6-205ENST00000485002 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.37■□□□□ 0.218e-8■■■■■ 57.3
MEGF6-205ENST00000485002 DDX6P26196 483 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■■■■■ 51.1
MEGF6-205ENST00000485002 GTF2F1P35269 517 aaKnown RBP eCLIP18.34■□□□□ 0.531e-11■■■■■ 47.1
MEGF6-205ENST00000485002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.56■□□□□ 0.726e-7■■■■■ 46.2
MEGF6-205ENST00000485002 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.47■□□□□ 0.394e-6■■■■■ 45.2
MEGF6-205ENST00000485002 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.19■□□□□ 0.188e-8■■■■■ 44.9
MEGF6-205ENST00000485002 TRA2AQ13595 282 aaKnown RBP eCLIP13.59□□□□□ -0.233e-8■■■■■ 37.6
MEGF6-205ENST00000485002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.24■□□□□ 0.198e-6■■■■■ 36.8
MEGF6-205ENST00000485002 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.87■□□□□ 0.299e-7■■■■■ 36
MEGF6-205ENST00000485002 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.69■□□□□ 0.12e-6■■■■■ 35.5
MEGF6-205ENST00000485002 CDC40O60508 579 aaKnown RBP eCLIP14.85□□□□□ -0.032e-6■■■■■ 32
MEGF6-205ENST00000485002 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.8■□□□□ 0.125e-9■■■■■ 31.1
MEGF6-205ENST00000485002 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.538e-7■■■■■ 31.1
MEGF6-205ENST00000485002 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.21■□□□□ 0.192e-7■■■■■ 29.5
MEGF6-205ENST00000485002 SMNDC1O75940 238 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■■■■ 28.9
MEGF6-205ENST00000485002 HNRNPLP14866 589 aaKnown RBP eCLIP15.92■□□□□ 0.142e-8■■■■■ 27.4
MEGF6-205ENST00000485002 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.37■□□□□ 0.053e-6■■■■■ 27.4
MEGF6-205ENST00000485002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.72■□□□□ 0.911e-6■■■■□ 26
MEGF6-205ENST00000485002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.95□□□□□ -0.023e-12■■■■□ 25.8
MEGF6-205ENST00000485002 LSM11P83369 360 aaKnown RBP eCLIP14.23□□□□□ -0.131e-6■■■■□ 25.2
MEGF6-205ENST00000485002 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.45■□□□□ 0.063e-6■■■■□ 25
MEGF6-205ENST00000485002 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■■■■□ 24.6
MEGF6-205ENST00000485002 NKRFO15226 690 aaKnown RBP eCLIP15.91■□□□□ 0.143e-6■■■■□ 23.6
MEGF6-205ENST00000485002 HNRNPKP61978 463 aaKnown RBP eCLIP14.37□□□□□ -0.111e-6■■■■□ 22.3
MEGF6-205ENST00000485002 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.219e-7■■■■□ 22.2
MEGF6-205ENST00000485002 AGGF1Q8N302 714 aaeCLIP16.76■□□□□ 0.272e-6■■■■□ 22
MEGF6-205ENST00000485002 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.383e-6■■■■□ 21.9
MEGF6-205ENST00000485002 EFTUD2Q15029 972 aaKnown RBP eCLIP16.51■□□□□ 0.232e-6■■■■□ 21.8
MEGF6-205ENST00000485002 PCBP2Q15366 365 aaKnown RBP eCLIP15.12■□□□□ 0.013e-6■■■■□ 21.6
MEGF6-205ENST00000485002 PPIGQ13427 754 aaKnown RBP eCLIP15.19■□□□□ 0.021e-6■■■■□ 21.3
MEGF6-205ENST00000485002 RBFOX2O43251 390 aaKnown RBP eCLIP13.2□□□□□ -0.32e-6■■■■□ 21.2
MEGF6-205ENST00000485002 SF3B4Q15427 424 aaKnown RBP eCLIP15.05■□□□□ 03e-7■■■■□ 20.9
MEGF6-205ENST00000485002 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■■□ 20.7
MEGF6-205ENST00000485002 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.67■□□□□ 0.421e-6■■■■□ 20.5
MEGF6-205ENST00000485002 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.99■□□□□ 0.472e-7■■■■□ 19.8
MEGF6-205ENST00000485002 SRSF1Q07955 248 aaKnown RBP eCLIP12.83□□□□□ -0.364e-6■■■■□ 19.8
MEGF6-205ENST00000485002 NCBP2P52298 156 aaKnown RBP eCLIP15.18■□□□□ 0.029e-7■■■■□ 19.6
MEGF6-205ENST00000485002 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.37■□□□□ 0.536e-9■■■■□ 19.3
MEGF6-205ENST00000485002 DKC1O60832 514 aaKnown RBP eCLIP17.04■□□□□ 0.325e-6■■■■□ 19.3
MEGF6-205ENST00000485002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.364e-6■■■□□ 17.6
MEGF6-205ENST00000485002 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.794e-8■■■□□ 17.4
MEGF6-205ENST00000485002 EIF4G2P78344 907 aaKnown RBP eCLIP21.13■□□□□ 0.973e-6■■■□□ 17.3
MEGF6-205ENST00000485002 SFPQP23246 707 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 15.4
MEGF6-205ENST00000485002 HLTFQ14527 1009 aaKnown RBP eCLIP17.99■□□□□ 0.471e-6■■■□□ 14.9
MEGF6-205ENST00000485002 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.38■□□□□ 0.378e-6■■■□□ 14.7
MEGF6-205ENST00000485002 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.71□□□□□ -0.067e-6■■□□□ 14.4
MEGF6-205ENST00000485002 RBM5P52756 815 aaKnown RBP eCLIP17.7■□□□□ 0.425e-6■■□□□ 14.3
MEGF6-205ENST00000485002 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.252e-6■■□□□ 12.9
MEGF6-205ENST00000485002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.92■□□□□ 0.468e-6■■□□□ 12.9
MEGF6-205ENST00000485002 PRPF4O43172 522 aaKnown RBP eCLIP16.11■□□□□ 0.171e-6■■□□□ 12.7
Retrieved 54 of 54 RNA–protein pairs in 11.8 ms