RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
RBM39-233ENST00000482563 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
RBM39-233ENST00000482563 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
RBM39-233ENST00000482563 EHMT2Q96KQ7 1210 aa17.66■□□□□ 0.42
RBM39-233ENST00000482563 PLPPR3Q6T4P5 718 aa17.55■□□□□ 0.4
RBM39-233ENST00000482563 KCNA4P22459 653 aa17.09■□□□□ 0.33
RBM39-233ENST00000482563 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
RBM39-233ENST00000482563 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
RBM39-233ENST00000482563 SENP3Q9H4L4 574 aaPredicted RBP16.7■□□□□ 0.26
RBM39-233ENST00000482563 ADRA2BP18089 450 aa16.65■□□□□ 0.26
RBM39-233ENST00000482563 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
RBM39-233ENST00000482563 RTN4Q9NQC3 1192 aaKnown RBP16.34■□□□□ 0.21
RBM39-233ENST00000482563 POTEDQ86YR6 584 aa16.14■□□□□ 0.17
RBM39-233ENST00000482563 AMER1Q5JTC6 1135 aaPredicted RBP16.1■□□□□ 0.17
RBM39-233ENST00000482563 PPP6R1Q9UPN7 881 aa16.1■□□□□ 0.17
RBM39-233ENST00000482563 ZBTB22O15209 634 aa15.85■□□□□ 0.13
RBM39-233ENST00000482563 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
RBM39-233ENST00000482563 FOXD1Q16676 465 aa15.63■□□□□ 0.09
RBM39-233ENST00000482563 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
RBM39-233ENST00000482563 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
RBM39-233ENST00000482563 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
RBM39-233ENST00000482563 PRKCSHP14314 528 aaPredicted RBP15.06■□□□□ 0
RBM39-233ENST00000482563 FKBP8Q14318 412 aa15.04■□□□□ -0
RBM39-233ENST00000482563 MSH5O43196 834 aa15.03■□□□□ -0
RBM39-233ENST00000482563 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
RBM39-233ENST00000482563 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
RBM39-233ENST00000482563 PIAS4Q8N2W9 510 aaPredicted RBP14.84□□□□□ -0.03
RBM39-233ENST00000482563 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
RBM39-233ENST00000482563 TAOK2Q9UL54 1235 aa14.79□□□□□ -0.04
RBM39-233ENST00000482563 BCANQ96GW7 911 aa14.74□□□□□ -0.05
RBM39-233ENST00000482563 HAP1P54257 671 aaPredicted RBP14.62□□□□□ -0.07
RBM39-233ENST00000482563 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
RBM39-233ENST00000482563 TPRNQ4KMQ1 711 aa14.52□□□□□ -0.08
RBM39-233ENST00000482563 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
RBM39-233ENST00000482563 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
RBM39-233ENST00000482563 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
RBM39-233ENST00000482563 TIMELESSQ9UNS1 1208 aa14.41□□□□□ -0.1
RBM39-233ENST00000482563 VSIG10Q8N0Z9 540 aa14.41□□□□□ -0.1
RBM39-233ENST00000482563 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.12
RBM39-233ENST00000482563 KDM2AQ9Y2K7 1162 aa14.27□□□□□ -0.12
RBM39-233ENST00000482563 ARXQ96QS3 562 aa14.25□□□□□ -0.13
RBM39-233ENST00000482563 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
RBM39-233ENST00000482563 MAPK8IP2Q13387 824 aaPredicted RBP14.24□□□□□ -0.13
RBM39-233ENST00000482563 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
RBM39-233ENST00000482563 FBLN2P98095 1184 aa14.15□□□□□ -0.14
RBM39-233ENST00000482563 DCAF8L2P0C7V8 631 aa14.12□□□□□ -0.15
RBM39-233ENST00000482563 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.16
RBM39-233ENST00000482563 PKD2Q13563 968 aa13.98□□□□□ -0.17
RBM39-233ENST00000482563 ATF5Q9Y2D1 282 aaPredicted RBP13.98□□□□□ -0.17
RBM39-233ENST00000482563 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
RBM39-233ENST00000482563 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
RBM39-233ENST00000482563 IFNLR1Q8IU57 520 aaPredicted RBP13.88□□□□□ -0.19
RBM39-233ENST00000482563 VASPP50552 380 aaPredicted RBP13.87□□□□□ -0.19
RBM39-233ENST00000482563 PAXIP1Q6ZW49 1069 aaPredicted RBP13.85□□□□□ -0.19
RBM39-233ENST00000482563 HOMEZQ8IX15 550 aa13.85□□□□□ -0.19
RBM39-233ENST00000482563 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
RBM39-233ENST00000482563 NPM1P06748 294 aaKnown RBP eCLIP13.84□□□□□ -0.19
RBM39-233ENST00000482563 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
RBM39-233ENST00000482563 CFAP44Q96MT7 982 aa13.79□□□□□ -0.2
RBM39-233ENST00000482563 TSHZ2Q9NRE2 1034 aa13.77□□□□□ -0.21
RBM39-233ENST00000482563 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
RBM39-233ENST00000482563 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
RBM39-233ENST00000482563 PROM2Q8N271 834 aa13.7□□□□□ -0.22
RBM39-233ENST00000482563 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
RBM39-233ENST00000482563 DNAJC5Q9H3Z4 198 aa13.61□□□□□ -0.23
RBM39-233ENST00000482563 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
RBM39-233ENST00000482563 NBR1Q14596 966 aa13.6□□□□□ -0.23
RBM39-233ENST00000482563 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
RBM39-233ENST00000482563 C14orf37Q86TY3 774 aa13.57□□□□□ -0.24
RBM39-233ENST00000482563 ECM2O94769 699 aaPredicted RBP13.5□□□□□ -0.25
RBM39-233ENST00000482563 RGL2O15211 777 aa13.44□□□□□ -0.26
RBM39-233ENST00000482563 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
RBM39-233ENST00000482563 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
RBM39-233ENST00000482563 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
RBM39-233ENST00000482563 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
RBM39-233ENST00000482563 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
RBM39-233ENST00000482563 SPOCK2Q92563 424 aa13.32□□□□□ -0.28
RBM39-233ENST00000482563 RANGAP1P46060 587 aaPredicted RBP13.3□□□□□ -0.28
RBM39-233ENST00000482563 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
RBM39-233ENST00000482563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
RBM39-233ENST00000482563 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
RBM39-233ENST00000482563 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
RBM39-233ENST00000482563 U3KPZ7 1027 aaPredicted RBP13.25□□□□□ -0.29
RBM39-233ENST00000482563 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
RBM39-233ENST00000482563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.36e-19■□□□□ 10.6
RBM39-233ENST00000482563 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
RBM39-233ENST00000482563 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
RBM39-233ENST00000482563 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
RBM39-233ENST00000482563 HS6ST3Q8IZP7 471 aa13.05□□□□□ -0.32
RBM39-233ENST00000482563 NKX1-1Q15270 411 aaPredicted RBP12.99□□□□□ -0.33
RBM39-233ENST00000482563 NPM2Q86SE8 214 aaKnown RBP12.99□□□□□ -0.33
RBM39-233ENST00000482563 HRCP23327 699 aa12.98□□□□□ -0.33
RBM39-233ENST00000482563 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
RBM39-233ENST00000482563 GTPBP6O43824 516 aaPredicted RBP12.93□□□□□ -0.34
RBM39-233ENST00000482563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
RBM39-233ENST00000482563 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
RBM39-233ENST00000482563 CIZ1Q9ULV3 898 aaPredicted RBP12.88□□□□□ -0.35
RBM39-233ENST00000482563 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
RBM39-233ENST00000482563 RNF25Q96BH1 459 aaPredicted RBP12.86□□□□□ -0.35
RBM39-233ENST00000482563 PLCD3Q8N3E9 789 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms