RNA–Protein interactions for RNA: ENST00000479257.5

CALU-203, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 2,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-203ENST00000479257 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
CALU-203ENST00000479257 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
CALU-203ENST00000479257 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
CALU-203ENST00000479257 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
CALU-203ENST00000479257 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
CALU-203ENST00000479257 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
CALU-203ENST00000479257 KCNA4P22459 653 aa14.42□□□□□ -0.1
CALU-203ENST00000479257 CSRNP3Q8WYN3 585 aa14.27□□□□□ -0.13
CALU-203ENST00000479257 RTN4Q9NQC3 1192 aaKnown RBP14.21□□□□□ -0.13
CALU-203ENST00000479257 ADRA2BP18089 450 aa13.98□□□□□ -0.17
CALU-203ENST00000479257 SLC4A1APQ9BWU0 796 aaKnown RBP13.66□□□□□ -0.22
CALU-203ENST00000479257 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
CALU-203ENST00000479257 ZBTB22O15209 634 aa13.47□□□□□ -0.25
CALU-203ENST00000479257 PRKCSHP14314 528 aaPredicted RBP13.43□□□□□ -0.26
CALU-203ENST00000479257 PPP6R1Q9UPN7 881 aa13.37□□□□□ -0.27
CALU-203ENST00000479257 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
CALU-203ENST00000479257 SENP3Q9H4L4 574 aaPredicted RBP13.18□□□□□ -0.3
CALU-203ENST00000479257 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
CALU-203ENST00000479257 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
CALU-203ENST00000479257 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
CALU-203ENST00000479257 TAOK2Q9UL54 1235 aa12.79□□□□□ -0.36
CALU-203ENST00000479257 FKBP8Q14318 412 aa12.76□□□□□ -0.37
CALU-203ENST00000479257 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
CALU-203ENST00000479257 TPRNQ4KMQ1 711 aa12.67□□□□□ -0.38
CALU-203ENST00000479257 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
CALU-203ENST00000479257 TULP1O00294 542 aaPredicted RBP12.6□□□□□ -0.39
CALU-203ENST00000479257 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
CALU-203ENST00000479257 FOXD1Q16676 465 aa12.52□□□□□ -0.41
CALU-203ENST00000479257 BCANQ96GW7 911 aa12.52□□□□□ -0.41
CALU-203ENST00000479257 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.42
CALU-203ENST00000479257 KDM2AQ9Y2K7 1162 aa12.34□□□□□ -0.43
CALU-203ENST00000479257 FBLN2P98095 1184 aa12.34□□□□□ -0.43
CALU-203ENST00000479257 ARXQ96QS3 562 aa12.25□□□□□ -0.45
CALU-203ENST00000479257 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.46
CALU-203ENST00000479257 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.47
CALU-203ENST00000479257 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
CALU-203ENST00000479257 PIAS4Q8N2W9 510 aaPredicted RBP12.05□□□□□ -0.48
CALU-203ENST00000479257 CNKSR2Q8WXI2 1034 aa12□□□□□ -0.49
CALU-203ENST00000479257 HOMEZQ8IX15 550 aa11.98□□□□□ -0.49
CALU-203ENST00000479257 SLC4A2P04920 1241 aa11.94□□□□□ -0.5
CALU-203ENST00000479257 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
CALU-203ENST00000479257 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
CALU-203ENST00000479257 TMEM132AQ24JP5 1023 aa11.89□□□□□ -0.51
CALU-203ENST00000479257 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
CALU-203ENST00000479257 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
CALU-203ENST00000479257 PKD2Q13563 968 aa11.84□□□□□ -0.51
CALU-203ENST00000479257 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
CALU-203ENST00000479257 PAXIP1Q6ZW49 1069 aaPredicted RBP11.83□□□□□ -0.52
CALU-203ENST00000479257 TSHZ2Q9NRE2 1034 aa11.83□□□□□ -0.52
CALU-203ENST00000479257 SUPT5HO00267 1087 aaKnown RBP11.83□□□□□ -0.52
CALU-203ENST00000479257 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
CALU-203ENST00000479257 C14orf37Q86TY3 774 aa11.77□□□□□ -0.52
CALU-203ENST00000479257 IFNLR1Q8IU57 520 aaPredicted RBP11.74□□□□□ -0.53
CALU-203ENST00000479257 UBTFP17480 764 aaKnown RBP11.65□□□□□ -0.54
CALU-203ENST00000479257 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
CALU-203ENST00000479257 TRIM26Q12899 539 aaPredicted RBP11.63□□□□□ -0.55
CALU-203ENST00000479257 DNAJC5BQ9UF47 199 aa11.6□□□□□ -0.55
CALU-203ENST00000479257 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
CALU-203ENST00000479257 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
CALU-203ENST00000479257 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
CALU-203ENST00000479257 HRCP23327 699 aa11.52□□□□□ -0.56
CALU-203ENST00000479257 NBR1Q14596 966 aa11.52□□□□□ -0.56
CALU-203ENST00000479257 MYCNP04198 464 aaPredicted RBP11.52□□□□□ -0.57
CALU-203ENST00000479257 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
CALU-203ENST00000479257 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
CALU-203ENST00000479257 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
CALU-203ENST00000479257 RGL2O15211 777 aa11.44□□□□□ -0.58
CALU-203ENST00000479257 RNF216Q9NWF9 866 aaPredicted RBP11.43□□□□□ -0.58
CALU-203ENST00000479257 SPRYD3Q8NCJ5 442 aa11.39□□□□□ -0.59
CALU-203ENST00000479257 SCAF1Q9H7N4 1312 aaKnown RBP11.37□□□□□ -0.59
CALU-203ENST00000479257 FBXO3Q9UK99 471 aa11.35□□□□□ -0.59
CALU-203ENST00000479257 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
CALU-203ENST00000479257 APLP2Q06481 763 aa11.3□□□□□ -0.6
CALU-203ENST00000479257 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
CALU-203ENST00000479257 SPDYE4A6NLX3 237 aa11.28□□□□□ -0.6
CALU-203ENST00000479257 ERICH6Q7L0X2 663 aa11.27□□□□□ -0.6
CALU-203ENST00000479257 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
CALU-203ENST00000479257 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
CALU-203ENST00000479257 ARID3AQ99856 593 aa11.23□□□□□ -0.61
CALU-203ENST00000479257 LOC105371045A0A1W2PR82 267 aa11.21□□□□□ -0.62
CALU-203ENST00000479257 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
CALU-203ENST00000479257 PROM2Q8N271 834 aa11.16□□□□□ -0.62
CALU-203ENST00000479257 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
CALU-203ENST00000479257 HOXD11P31277 338 aaPredicted RBP11.08□□□□□ -0.64
CALU-203ENST00000479257 NISCHQ9Y2I1 1504 aa11.06□□□□□ -0.64
CALU-203ENST00000479257 NKX1-1Q15270 411 aaPredicted RBP11.05□□□□□ -0.64
CALU-203ENST00000479257 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
CALU-203ENST00000479257 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
CALU-203ENST00000479257 NEUROD2Q15784 382 aa10.99□□□□□ -0.65
CALU-203ENST00000479257 SPOCK2Q92563 424 aa10.96□□□□□ -0.65
CALU-203ENST00000479257 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.66
CALU-203ENST00000479257 ZNF219Q9P2Y4 722 aaPredicted RBP10.93□□□□□ -0.66
CALU-203ENST00000479257 TRIM41Q8WV44 630 aa10.92□□□□□ -0.66
CALU-203ENST00000479257 RNF25Q96BH1 459 aaPredicted RBP10.92□□□□□ -0.66
CALU-203ENST00000479257 IGSF3O75054 1194 aa10.91□□□□□ -0.66
CALU-203ENST00000479257 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
CALU-203ENST00000479257 SLC24A3Q9HC58 644 aa10.9□□□□□ -0.66
CALU-203ENST00000479257 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
CALU-203ENST00000479257 ZNF428Q96B54 188 aa10.85□□□□□ -0.67
CALU-203ENST00000479257 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms