RNA–Protein interactions for RNA: ENST00000452368.7

RPL13-204, Transcript of ribosomal protein L13, humanhuman

TSL 2 BASIC

Gene RPL13, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-204ENST00000452368 SUB1P53999 127 aaKnown RBP eCLIP11.56□□□□□ -0.564e-21■■■■■ 150.6
RPL13-204ENST00000452368 SF3B4Q15427 424 aaKnown RBP eCLIP13.11□□□□□ -0.311e-25■■■■■ 55.9
RPL13-204ENST00000452368 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.31■□□□□ 0.21e-13■■■■■ 30.7
RPL13-204ENST00000452368 SF3B1O75533 1304 aaKnown RBP eCLIP15.65■□□□□ 0.13e-6■■■■■ 28.9
RPL13-204ENST00000452368 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.461e-12■■■■■ 27.8
RPL13-204ENST00000452368 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.652e-20■■■■■ 27.4
RPL13-204ENST00000452368 RBM22Q9NW64 420 aaKnown RBP eCLIP14.93□□□□□ -0.026e-11■■■■□ 25.8
RPL13-204ENST00000452368 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.35e-13■■■■□ 23.7
RPL13-204ENST00000452368 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.74■□□□□ 0.111e-6■■■■□ 23.6
RPL13-204ENST00000452368 DDX3XO00571 662 aaKnown RBP eCLIP15.54■□□□□ 0.081e-70■■■■□ 23
RPL13-204ENST00000452368 NOLC1Q14978 699 aaKnown RBP eCLIP16■□□□□ 0.158e-57■■■■□ 20.7
RPL13-204ENST00000452368 TIAL1Q01085 375 aaKnown RBP eCLIP14.42□□□□□ -0.19e-11■■■■□ 20.5
RPL13-204ENST00000452368 EFTUD2Q15029 972 aaKnown RBP eCLIP14.57□□□□□ -0.084e-12■■■■□ 20.4
RPL13-204ENST00000452368 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.338e-8■■■■□ 19.7
RPL13-204ENST00000452368 NCBP2P52298 156 aaKnown RBP eCLIP13.76□□□□□ -0.217e-22■■■■□ 19.6
RPL13-204ENST00000452368 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.321e-13■■■□□ 18.5
RPL13-204ENST00000452368 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.76■□□□□ 0.112e-11■■■□□ 17.8
RPL13-204ENST00000452368 RBM15Q96T37 977 aaKnown RBP eCLIP14.84□□□□□ -0.031e-7■■■□□ 16.9
RPL13-204ENST00000452368 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.512e-12■■■□□ 15.8
RPL13-204ENST00000452368 DDX6P26196 483 aaKnown RBP eCLIP15.27■□□□□ 0.038e-7■■■□□ 15.4
RPL13-204ENST00000452368 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.79■□□□□ 0.123e-32■■■□□ 15.3
RPL13-204ENST00000452368 SMNDC1O75940 238 aaKnown RBP eCLIP12.93□□□□□ -0.341e-26■■■□□ 15.2
RPL13-204ENST00000452368 LARP4Q71RC2 724 aaKnown RBP eCLIP13.99□□□□□ -0.176e-19■■■□□ 14.8
RPL13-204ENST00000452368 YBX3P16989 372 aaKnown RBP eCLIP17.69■□□□□ 0.423e-64■■□□□ 14.2
RPL13-204ENST00000452368 LSM11P83369 360 aaKnown RBP eCLIP13.22□□□□□ -0.298e-11■■□□□ 13.9
RPL13-204ENST00000452368 ZRANB2O95218 330 aaKnown RBP eCLIP15.2■□□□□ 0.029e-7■■□□□ 13.9
RPL13-204ENST00000452368 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.67□□□□□ -0.062e-9■■□□□ 13.3
RPL13-204ENST00000452368 SF3A3Q12874 501 aaKnown RBP eCLIP14.01□□□□□ -0.175e-9■■□□□ 13.1
RPL13-204ENST00000452368 AATFQ9NY61 560 aaKnown RBP eCLIP17.56■□□□□ 0.41e-6■■□□□ 13.1
RPL13-204ENST00000452368 GPKOWQ92917 476 aaPredicted RBP eCLIP16.88■□□□□ 0.292e-6■■□□□ 11.6
RPL13-204ENST00000452368 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.54■□□□□ 0.081e-8■□□□□ 11.3
RPL13-204ENST00000452368 RPS3P23396 243 aaKnown RBP eCLIP14.5□□□□□ -0.091e-18■□□□□ 11.1
RPL13-204ENST00000452368 TIA1P31483 386 aaKnown RBP eCLIP13.94□□□□□ -0.184e-9■□□□□ 10.6
RPL13-204ENST00000452368 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.932e-10■□□□□ 10.4
RPL13-204ENST00000452368 CSTF2P33240 577 aaKnown RBP eCLIP13.97□□□□□ -0.175e-11■□□□□ 10.4
RPL13-204ENST00000452368 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.283e-13■□□□□ 10.1
RPL13-204ENST00000452368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.5■■□□□ 1.196e-26■□□□□ 10
RPL13-204ENST00000452368 PUM1Q14671 1186 aaKnown RBP eCLIP13.9□□□□□ -0.188e-21■□□□□ 9.8
RPL13-204ENST00000452368 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.76□□□□□ -0.211e-11■□□□□ 9.8
RPL13-204ENST00000452368 PRPF4O43172 522 aaKnown RBP eCLIP14.39□□□□□ -0.111e-10■□□□□ 9.7
RPL13-204ENST00000452368 RBFOX2O43251 390 aaKnown RBP eCLIP11.83□□□□□ -0.523e-10■□□□□ 9.4
RPL13-204ENST00000452368 PCBP1Q15365 356 aaKnown RBP eCLIP16.09■□□□□ 0.178e-9■□□□□ 9
RPL13-204ENST00000452368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.33■■□□□ 1.174e-24■□□□□ 8.8
RPL13-204ENST00000452368 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■□□□□ 8.2
Retrieved 44 of 44 RNA–protein pairs in 9.5 ms