RNA–Protein interactions for RNA: ENST00000452368.7

RPL13-204, Transcript of ribosomal protein L13, humanhuman

TSL 2 BASIC

Gene RPL13, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-204ENST00000452368 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
RPL13-204ENST00000452368 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
RPL13-204ENST00000452368 ABCC9O60706 1549 aa29.01■■■□□ 2.23
RPL13-204ENST00000452368 ZCCHC6Q5VYS8 1495 aaKnown RBP28.71■■■□□ 2.19
RPL13-204ENST00000452368 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
RPL13-204ENST00000452368 DCAF8L2P0C7V8 631 aa28.38■■■□□ 2.13
RPL13-204ENST00000452368 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
RPL13-204ENST00000452368 NACADO15069 1562 aa28.26■■■□□ 2.11
RPL13-204ENST00000452368 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
RPL13-204ENST00000452368 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
RPL13-204ENST00000452368 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
RPL13-204ENST00000452368 UNC13AQ9UPW8 1703 aa27.44■■□□□ 1.98
RPL13-204ENST00000452368 BICRAQ9NZM4 1560 aa27.2■■□□□ 1.94
RPL13-204ENST00000452368 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.932e-10■□□□□ 10.4
RPL13-204ENST00000452368 DNAJC5BQ9UF47 199 aa27.08■■□□□ 1.93
RPL13-204ENST00000452368 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
RPL13-204ENST00000452368 BAZ1AQ9NRL2 1556 aaPredicted RBP26.56■■□□□ 1.84
RPL13-204ENST00000452368 SMARCA4P51532 1647 aa26.47■■□□□ 1.83
RPL13-204ENST00000452368 EIF4G1Q04637 1599 aaKnown RBP26.46■■□□□ 1.83
RPL13-204ENST00000452368 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
RPL13-204ENST00000452368 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
RPL13-204ENST00000452368 PEG3Q9GZU2 1588 aa26.21■■□□□ 1.79
RPL13-204ENST00000452368 SUPT5HO00267 1087 aaKnown RBP26.2■■□□□ 1.78
RPL13-204ENST00000452368 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
RPL13-204ENST00000452368 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
RPL13-204ENST00000452368 WIZO95785 1651 aa26.17■■□□□ 1.78
RPL13-204ENST00000452368 ATAD2BQ9ULI0 1458 aa26.15■■□□□ 1.78
RPL13-204ENST00000452368 NCAPD3P42695 1498 aa26.05■■□□□ 1.76
RPL13-204ENST00000452368 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
RPL13-204ENST00000452368 HMGXB3Q12766 1538 aa26■■□□□ 1.75
RPL13-204ENST00000452368 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
RPL13-204ENST00000452368 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
RPL13-204ENST00000452368 CADPSQ9ULU8 1353 aa25.33■■□□□ 1.65
RPL13-204ENST00000452368 CFTRP13569 1480 aa25.32■■□□□ 1.64
RPL13-204ENST00000452368 LAMC3Q9Y6N6 1575 aa25.28■■□□□ 1.64
RPL13-204ENST00000452368 NESP48681 1621 aa25.19■■□□□ 1.62
RPL13-204ENST00000452368 PRDM2Q13029 1718 aa25.19■■□□□ 1.62
RPL13-204ENST00000452368 PDS5BQ9NTI5 1447 aa25.09■■□□□ 1.61
RPL13-204ENST00000452368 ERCC6Q03468 1493 aa25.04■■□□□ 1.6
RPL13-204ENST00000452368 FANCD2Q9BXW9 1451 aa25.04■■□□□ 1.6
RPL13-204ENST00000452368 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
RPL13-204ENST00000452368 KIF21AQ7Z4S6 1674 aa24.92■■□□□ 1.58
RPL13-204ENST00000452368 ABCC8Q09428 1581 aa24.89■■□□□ 1.58
RPL13-204ENST00000452368 CUX2O14529 1486 aa24.89■■□□□ 1.57
RPL13-204ENST00000452368 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
RPL13-204ENST00000452368 CHIC1Q5VXU3 224 aa24.82■■□□□ 1.56
RPL13-204ENST00000452368 MRC2Q9UBG0 1479 aa24.78■■□□□ 1.56
RPL13-204ENST00000452368 DNAJC5Q9H3Z4 198 aa24.77■■□□□ 1.56
RPL13-204ENST00000452368 CUX1P39880 1505 aa24.75■■□□□ 1.55
RPL13-204ENST00000452368 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
RPL13-204ENST00000452368 SYNJ1O43426 1573 aa24.74■■□□□ 1.55
RPL13-204ENST00000452368 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
RPL13-204ENST00000452368 TOP2BQ02880 1626 aa24.73■■□□□ 1.55
RPL13-204ENST00000452368 BIVM-ERCC5R4GMW8 1640 aa24.73■■□□□ 1.55
RPL13-204ENST00000452368 URB2Q14146 1524 aaKnown RBP24.72■■□□□ 1.55
RPL13-204ENST00000452368 TOPBP1Q92547 1522 aa24.7■■□□□ 1.54
RPL13-204ENST00000452368 THOC2Q8NI27 1593 aaKnown RBP24.69■■□□□ 1.54
RPL13-204ENST00000452368 WDR62O43379 1518 aa24.67■■□□□ 1.54
RPL13-204ENST00000452368 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
RPL13-204ENST00000452368 POLA1P09884 1462 aaPredicted RBP24.55■■□□□ 1.52
RPL13-204ENST00000452368 SOGA1O94964 1423 aa24.46■■□□□ 1.51
RPL13-204ENST00000452368 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
RPL13-204ENST00000452368 RAD54L2Q9Y4B4 1467 aa24.4■■□□□ 1.5
RPL13-204ENST00000452368 ABCA10Q8WWZ4 1543 aa24.38■■□□□ 1.49
RPL13-204ENST00000452368 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
RPL13-204ENST00000452368 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
RPL13-204ENST00000452368 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
RPL13-204ENST00000452368 EEA1Q15075 1411 aa24.31■■□□□ 1.48
RPL13-204ENST00000452368 RUSC2Q8N2Y8 1516 aa24.22■■□□□ 1.47
RPL13-204ENST00000452368 ABCA5Q8WWZ7 1642 aa24.22■■□□□ 1.47
RPL13-204ENST00000452368 TDRD9Q8NDG6 1382 aaKnown RBP24.21■■□□□ 1.47
RPL13-204ENST00000452368 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
RPL13-204ENST00000452368 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
RPL13-204ENST00000452368 FAM9AQ8IZU1 332 aaPredicted RBP24.18■■□□□ 1.46
RPL13-204ENST00000452368 EIF4G3O43432 1585 aaKnown RBP24.17■■□□□ 1.46
RPL13-204ENST00000452368 AQRO60306 1485 aaKnown RBP eCLIP24.15■■□□□ 1.461e-12■■■■■ 27.8
RPL13-204ENST00000452368 CSRNP3Q8WYN3 585 aa24.13■■□□□ 1.45
RPL13-204ENST00000452368 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
RPL13-204ENST00000452368 GRIN2BQ13224 1484 aa24.1■■□□□ 1.45
RPL13-204ENST00000452368 PBRM1Q86U86 1689 aa24.1■■□□□ 1.45
RPL13-204ENST00000452368 IGF1RP08069 1367 aa24.09■■□□□ 1.45
RPL13-204ENST00000452368 CUL7Q14999 1698 aa24.04■■□□□ 1.44
RPL13-204ENST00000452368 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
RPL13-204ENST00000452368 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
RPL13-204ENST00000452368 MAGI1Q96QZ7 1491 aaPredicted RBP23.98■■□□□ 1.43
RPL13-204ENST00000452368 KIF21BO75037 1637 aa23.98■■□□□ 1.43
RPL13-204ENST00000452368 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
RPL13-204ENST00000452368 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
RPL13-204ENST00000452368 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.42
RPL13-204ENST00000452368 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
RPL13-204ENST00000452368 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
RPL13-204ENST00000452368 SYNJ2O15056 1496 aa23.87■■□□□ 1.41
RPL13-204ENST00000452368 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
RPL13-204ENST00000452368 EHMT2Q96KQ7 1210 aa23.81■■□□□ 1.4
RPL13-204ENST00000452368 GRIN2AQ12879 1464 aa23.8■■□□□ 1.4
RPL13-204ENST00000452368 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
RPL13-204ENST00000452368 UBTFP17480 764 aaKnown RBP23.76■■□□□ 1.39
RPL13-204ENST00000452368 FBLN2P98095 1184 aa23.75■■□□□ 1.39
RPL13-204ENST00000452368 OSCARQ8IYS5 282 aa23.75■■□□□ 1.39
RPL13-204ENST00000452368 CHD1O14646 1710 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms