RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
CKS1BP5-201ENST00000434172 AEBP2Q6ZN18 517 aaPredicted RBP10.93□□□□□ -0.66
CKS1BP5-201ENST00000434172 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
CKS1BP5-201ENST00000434172 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
CKS1BP5-201ENST00000434172 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
CKS1BP5-201ENST00000434172 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
CKS1BP5-201ENST00000434172 KCNA4P22459 653 aa9.2□□□□□ -0.94
CKS1BP5-201ENST00000434172 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
CKS1BP5-201ENST00000434172 CSRNP3Q8WYN3 585 aa9.05□□□□□ -0.96
CKS1BP5-201ENST00000434172 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
CKS1BP5-201ENST00000434172 ADRA2BP18089 450 aa8.91□□□□□ -0.98
CKS1BP5-201ENST00000434172 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
CKS1BP5-201ENST00000434172 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
CKS1BP5-201ENST00000434172 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
CKS1BP5-201ENST00000434172 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
CKS1BP5-201ENST00000434172 PPP4R3CPQ6ZMV5 832 aa8.58□□□□□ -1.04
CKS1BP5-201ENST00000434172 ZBTB22O15209 634 aa8.47□□□□□ -1.05
CKS1BP5-201ENST00000434172 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
CKS1BP5-201ENST00000434172 FOXD1Q16676 465 aa8.42□□□□□ -1.06
CKS1BP5-201ENST00000434172 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
CKS1BP5-201ENST00000434172 DNAJC5BQ9UF47 199 aa8.23□□□□□ -1.09
CKS1BP5-201ENST00000434172 CNKSR2Q8WXI2 1034 aa8.22□□□□□ -1.09
CKS1BP5-201ENST00000434172 PIAS4Q8N2W9 510 aaPredicted RBP8.15□□□□□ -1.1
CKS1BP5-201ENST00000434172 FKBP8Q14318 412 aa8.14□□□□□ -1.11
CKS1BP5-201ENST00000434172 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
CKS1BP5-201ENST00000434172 BCANQ96GW7 911 aa8.06□□□□□ -1.12
CKS1BP5-201ENST00000434172 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
CKS1BP5-201ENST00000434172 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
CKS1BP5-201ENST00000434172 TAOK2Q9UL54 1235 aa7.95□□□□□ -1.14
CKS1BP5-201ENST00000434172 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
CKS1BP5-201ENST00000434172 HAP1P54257 671 aaPredicted RBP7.89□□□□□ -1.15
CKS1BP5-201ENST00000434172 RNF216Q9NWF9 866 aaPredicted RBP7.88□□□□□ -1.15
CKS1BP5-201ENST00000434172 VSIG10Q8N0Z9 540 aa7.87□□□□□ -1.15
CKS1BP5-201ENST00000434172 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
CKS1BP5-201ENST00000434172 DAXXQ9UER7 740 aaPredicted RBP7.85□□□□□ -1.15
CKS1BP5-201ENST00000434172 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
CKS1BP5-201ENST00000434172 SLC4A2P04920 1241 aa7.77□□□□□ -1.17
CKS1BP5-201ENST00000434172 ARXQ96QS3 562 aa7.76□□□□□ -1.17
CKS1BP5-201ENST00000434172 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
CKS1BP5-201ENST00000434172 ERICH6Q7L0X2 663 aa7.73□□□□□ -1.17
CKS1BP5-201ENST00000434172 DCAF8L2P0C7V8 631 aa7.67□□□□□ -1.18
CKS1BP5-201ENST00000434172 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
CKS1BP5-201ENST00000434172 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
CKS1BP5-201ENST00000434172 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP5-201ENST00000434172 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP5-201ENST00000434172 TULP1O00294 542 aaPredicted RBP7.6□□□□□ -1.19
CKS1BP5-201ENST00000434172 KDM2AQ9Y2K7 1162 aa7.6□□□□□ -1.19
CKS1BP5-201ENST00000434172 VASPP50552 380 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP5-201ENST00000434172 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP5-201ENST00000434172 MSH5O43196 834 aa7.56□□□□□ -1.2
CKS1BP5-201ENST00000434172 GTF3C3Q9Y5Q9 886 aa7.54□□□□□ -1.2
CKS1BP5-201ENST00000434172 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
CKS1BP5-201ENST00000434172 PKD2Q13563 968 aa7.52□□□□□ -1.21
CKS1BP5-201ENST00000434172 FBLN2P98095 1184 aa7.51□□□□□ -1.21
CKS1BP5-201ENST00000434172 DMRT2Q9Y5R5 561 aa7.5□□□□□ -1.21
CKS1BP5-201ENST00000434172 PROM2Q8N271 834 aa7.49□□□□□ -1.21
CKS1BP5-201ENST00000434172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 HNRNPUL2Q1KMD3 747 aaKnown RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 PAXIP1Q6ZW49 1069 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 NBR1Q14596 966 aa7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 SAMD1Q6SPF0 538 aaPredicted RBP7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 IFNLR1Q8IU57 520 aaPredicted RBP7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
CKS1BP5-201ENST00000434172 SPDYE4A6NLX3 237 aa7.45□□□□□ -1.22
CKS1BP5-201ENST00000434172 CFAP44Q96MT7 982 aa7.44□□□□□ -1.22
CKS1BP5-201ENST00000434172 TMEM132AQ24JP5 1023 aa7.41□□□□□ -1.22
CKS1BP5-201ENST00000434172 SPRYD3Q8NCJ5 442 aa7.41□□□□□ -1.22
CKS1BP5-201ENST00000434172 DNAJC5Q9H3Z4 198 aa7.4□□□□□ -1.22
CKS1BP5-201ENST00000434172 NPM1P06748 294 aaKnown RBP eCLIP7.37□□□□□ -1.23
CKS1BP5-201ENST00000434172 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
CKS1BP5-201ENST00000434172 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP5-201ENST00000434172 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
CKS1BP5-201ENST00000434172 ZNF219Q9P2Y4 722 aaPredicted RBP7.33□□□□□ -1.24
CKS1BP5-201ENST00000434172 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
CKS1BP5-201ENST00000434172 SPOCK2Q92563 424 aa7.31□□□□□ -1.24
CKS1BP5-201ENST00000434172 APLP2Q06481 763 aa7.25□□□□□ -1.25
CKS1BP5-201ENST00000434172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.25□□□□□ -1.25
CKS1BP5-201ENST00000434172 RGL2O15211 777 aa7.23□□□□□ -1.25
CKS1BP5-201ENST00000434172 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
CKS1BP5-201ENST00000434172 MKRN4PQ13434 485 aaPredicted RBP7.21□□□□□ -1.26
CKS1BP5-201ENST00000434172 U3KPZ7 1027 aaPredicted RBP7.21□□□□□ -1.26
CKS1BP5-201ENST00000434172 CHGAP10645 457 aaKnown RBP7.19□□□□□ -1.26
CKS1BP5-201ENST00000434172 PODXL2Q9NZ53 605 aa7.17□□□□□ -1.26
CKS1BP5-201ENST00000434172 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
CKS1BP5-201ENST00000434172 TRIM41Q8WV44 630 aa7.13□□□□□ -1.27
CKS1BP5-201ENST00000434172 STAG3Q9UJ98 1225 aa7.12□□□□□ -1.27
CKS1BP5-201ENST00000434172 P3H3Q8IVL6 736 aa7.07□□□□□ -1.28
CKS1BP5-201ENST00000434172 PLCD3Q8N3E9 789 aa7.06□□□□□ -1.28
CKS1BP5-201ENST00000434172 DCAF8L1A6NGE4 600 aa7.05□□□□□ -1.28
CKS1BP5-201ENST00000434172 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
CKS1BP5-201ENST00000434172 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 ZBTB47Q9UFB7 747 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 GTPBP6O43824 516 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 RYDENQ9NUL5 291 aaKnown RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 ZBTB12Q9Y330 459 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
CKS1BP5-201ENST00000434172 PLEKHG5O94827 1062 aa6.96□□□□□ -1.3
CKS1BP5-201ENST00000434172 NKX1-1Q15270 411 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms