RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 KIAA0586Q9BVV6 1533 aa50.35■■■■■ 5.65
CSNK1E-206ENST00000413574 CTTNBP2Q8WZ74 1663 aa50.29■■■■■ 5.64
CSNK1E-206ENST00000413574 SHROOM2Q13796 1616 aa50.23■■■■■ 5.63
CSNK1E-206ENST00000413574 IQGAP2Q13576 1575 aa50.22■■■■■ 5.63
CSNK1E-206ENST00000413574 GOLGA3Q08378 1498 aa50.22■■■■■ 5.63
CSNK1E-206ENST00000413574 JPH4Q96JJ6 628 aa50.19■■■■■ 5.63
CSNK1E-206ENST00000413574 ARHGEF11O15085 1522 aa50.15■■■■■ 5.62
CSNK1E-206ENST00000413574 RIMBP3CA6NJZ7 1639 aa50.12■■■■■ 5.61
CSNK1E-206ENST00000413574 RIMBP3BA6NNM3 1639 aa50.12■■■■■ 5.61
CSNK1E-206ENST00000413574 RIMBP3Q9UFD9 1639 aa50.12■■■■■ 5.61
CSNK1E-206ENST00000413574 ERCC6L2Q5T890 1561 aa50.1■■■■■ 5.61
CSNK1E-206ENST00000413574 UBTFP17480 764 aaKnown RBP50.08■■■■■ 5.61
CSNK1E-206ENST00000413574 PRG4Q92954 1404 aaPredicted RBP50.05■■■■■ 5.6
CSNK1E-206ENST00000413574 UGGT2Q9NYU1 1516 aa49.93■■■■■ 5.58
CSNK1E-206ENST00000413574 RANGAP1P46060 587 aaPredicted RBP49.86■■■■■ 5.57
CSNK1E-206ENST00000413574 LOC105371045A0A1W2PR82 267 aa49.85■■■■■ 5.57
CSNK1E-206ENST00000413574 DISP1Q96F81 1524 aa49.84■■■■■ 5.57
CSNK1E-206ENST00000413574 ARAP1Q96P48 1450 aa49.82■■■■■ 5.57
CSNK1E-206ENST00000413574 CARMIL2Q6F5E8 1435 aa49.77■■■■■ 5.56
CSNK1E-206ENST00000413574 KIAA0556O60303 1618 aa49.75■■■■■ 5.55
CSNK1E-206ENST00000413574 CYB5RLQ6IPT4 315 aa49.7■■■■■ 5.55
CSNK1E-206ENST00000413574 TNIKQ9UKE5 1360 aa49.68■■■■■ 5.54
CSNK1E-206ENST00000413574 SAMD9Q5K651 1589 aa49.64■■■■■ 5.54
CSNK1E-206ENST00000413574 P3H3Q8IVL6 736 aa49.63■■■■■ 5.54
CSNK1E-206ENST00000413574 TTBK1Q5TCY1 1321 aaPredicted RBP49.63■■■■■ 5.54
CSNK1E-206ENST00000413574 PTPRGP23470 1445 aa49.51■■■■■ 5.52
CSNK1E-206ENST00000413574 EFCAB5A4FU69 1503 aa49.49■■■■■ 5.51
CSNK1E-206ENST00000413574 ARHGAP35Q9NRY4 1499 aa49.44■■■■■ 5.51
CSNK1E-206ENST00000413574 FHOD3Q2V2M9 1422 aa49.44■■■■■ 5.5
CSNK1E-206ENST00000413574 CLIP1P30622 1438 aa49.35■■■■■ 5.49
CSNK1E-206ENST00000413574 CEP162Q5TB80 1403 aa49.32■■■■■ 5.49
CSNK1E-206ENST00000413574 ADCY10Q96PN6 1610 aa49.24■■■■■ 5.47
CSNK1E-206ENST00000413574 PLB1Q6P1J6 1458 aa49.23■■■■■ 5.47
CSNK1E-206ENST00000413574 UACAQ9BZF9 1416 aa49.2■■■■■ 5.47
CSNK1E-206ENST00000413574 ABCA8O94911 1581 aa49.14■■■■■ 5.46
CSNK1E-206ENST00000413574 ABCC2Q92887 1545 aa49.11■■■■■ 5.45
CSNK1E-206ENST00000413574 UHRF1BP1LA0JNW5 1464 aa49.08■■■■■ 5.45
CSNK1E-206ENST00000413574 RAPGEF6Q8TEU7 1601 aa49.04■■■■■ 5.44
CSNK1E-206ENST00000413574 FMN1Q68DA7 1419 aa49.02■■■■■ 5.44
CSNK1E-206ENST00000413574 ARID3CA6NKF2 412 aa48.91■■■■■ 5.42
CSNK1E-206ENST00000413574 NPM1P06748 294 aaKnown RBP eCLIP48.91■■■■■ 5.42
CSNK1E-206ENST00000413574 KDM5BQ9UGL1 1544 aa48.88■■■■■ 5.42
CSNK1E-206ENST00000413574 NUP153P49790 1475 aaKnown RBP48.87■■■■■ 5.41
CSNK1E-206ENST00000413574 ZCCHC11Q5TAX3 1644 aaKnown RBP48.86■■■■■ 5.41
CSNK1E-206ENST00000413574 PCF11O94913 1555 aaKnown RBP48.84■■■■■ 5.41
CSNK1E-206ENST00000413574 ATP1B4Q9UN42 357 aaPredicted RBP48.83■■■■■ 5.41
CSNK1E-206ENST00000413574 ATP10BO94823 1461 aa48.76■■■■■ 5.4
CSNK1E-206ENST00000413574 HECW1Q76N89 1606 aa48.76■■■■■ 5.4
CSNK1E-206ENST00000413574 CASKIN1Q8WXD9 1431 aa48.75■■■■■ 5.39
CSNK1E-206ENST00000413574 LRRIQ1Q96JM4 1722 aa48.71■■■■■ 5.39
CSNK1E-206ENST00000413574 MAPKBP1O60336 1514 aa48.69■■■■■ 5.38
CSNK1E-206ENST00000413574 FYCO1Q9BQS8 1478 aa48.67■■■■■ 5.38
CSNK1E-206ENST00000413574 CDK13Q14004 1512 aaKnown RBP48.65■■■■■ 5.38
CSNK1E-206ENST00000413574 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP48.65■■■■■ 5.38
CSNK1E-206ENST00000413574 HNRNPUL2Q1KMD3 747 aaKnown RBP48.65■■■■■ 5.38
CSNK1E-206ENST00000413574 VPS8Q8N3P4 1428 aa48.64■■■■■ 5.38
CSNK1E-206ENST00000413574 ASXL2Q76L83 1435 aa48.63■■■■■ 5.38
CSNK1E-206ENST00000413574 EPRSP07814 1512 aaKnown RBP48.63■■■■■ 5.38
CSNK1E-206ENST00000413574 WDR7Q9Y4E6 1490 aa48.47■■■■■ 5.35
CSNK1E-206ENST00000413574 CCDC18Q5T9S5 1454 aa48.45■■■■■ 5.35
CSNK1E-206ENST00000413574 TRHP20396 242 aaPredicted RBP48.45■■■■■ 5.35
CSNK1E-206ENST00000413574 ABCC10Q5T3U5 1492 aa48.4■■■■■ 5.34
CSNK1E-206ENST00000413574 KIF13AQ9H1H9 1805 aa48.4■■■■■ 5.34
CSNK1E-206ENST00000413574 DIP2BQ9P265 1576 aa48.39■■■■■ 5.34
CSNK1E-206ENST00000413574 KCNH8Q96L42 1107 aa48.37■■■■■ 5.33
CSNK1E-206ENST00000413574 PLEKHD1A6NEE1 506 aa48.36■■■■■ 5.33
CSNK1E-206ENST00000413574 FAM69CQ0P6D2 419 aa48.32■■■■■ 5.33
CSNK1E-206ENST00000413574 CDK11AQ9UQ88 783 aaPredicted RBP48.28■■■■■ 5.32
CSNK1E-206ENST00000413574 MAGI3Q5TCQ9 1506 aa48.27■■■■■ 5.32
CSNK1E-206ENST00000413574 CFAP43Q8NDM7 1665 aa48.24■■■■■ 5.31
CSNK1E-206ENST00000413574 TIAM1Q13009 1591 aa48.21■■■■■ 5.31
CSNK1E-206ENST00000413574 GLI2P10070 1586 aa48.2■■■■■ 5.31
CSNK1E-206ENST00000413574 TROQ12816 1431 aaPredicted RBP48.18■■■■■ 5.3
CSNK1E-206ENST00000413574 KIF14Q15058 1648 aa48.11■■■■■ 5.29
CSNK1E-206ENST00000413574 TSPOAP1O95153 1857 aa48.09■■■■■ 5.29
CSNK1E-206ENST00000413574 MAP3K1Q13233 1512 aa48.07■■■■■ 5.29
CSNK1E-206ENST00000413574 MTUS2Q5JR59 1369 aa48.07■■■■■ 5.29
CSNK1E-206ENST00000413574 MAP3K4Q9Y6R4 1608 aa48.07■■■■■ 5.29
CSNK1E-206ENST00000413574 APLP2Q06481 763 aa48.06■■■■■ 5.28
CSNK1E-206ENST00000413574 ABCA9Q8IUA7 1624 aa48.06■■■■■ 5.28
CSNK1E-206ENST00000413574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP48.04■■■■■ 5.288e-8■■□□□ 12.3
CSNK1E-206ENST00000413574 TTC37Q6PGP7 1564 aa48.01■■■■■ 5.28
CSNK1E-206ENST00000413574 KANK4Q5T7N3 995 aaPredicted RBP48■■■■■ 5.27
CSNK1E-206ENST00000413574 EHBP1L1Q8N3D4 1523 aa47.99■■■■■ 5.27
CSNK1E-206ENST00000413574 LRRC9Q6ZRR7 1453 aa47.98■■■■■ 5.27
CSNK1E-206ENST00000413574 CD109Q6YHK3 1445 aa47.96■■■■■ 5.27
CSNK1E-206ENST00000413574 PPRC1Q5VV67 1664 aaKnown RBP47.93■■■■■ 5.26
CSNK1E-206ENST00000413574 SUPT6HQ7KZ85 1726 aaKnown RBP47.82■■■■■ 5.25
CSNK1E-206ENST00000413574 MYO5CQ9NQX4 1742 aa47.8■■■■■ 5.24
CSNK1E-206ENST00000413574 NCOA2Q15596 1464 aa47.75■■■■■ 5.23
CSNK1E-206ENST00000413574 CDC42BPAQ5VT25 1732 aa47.74■■■■■ 5.23
CSNK1E-206ENST00000413574 PPARGC1BQ86YN6 1023 aaKnown RBP47.71■■■■■ 5.23
CSNK1E-206ENST00000413574 PLCH2O75038 1416 aa47.71■■■■■ 5.23
CSNK1E-206ENST00000413574 TEX14Q8IWB6 1497 aa47.69■■■■■ 5.23
CSNK1E-206ENST00000413574 CDC42BPBQ9Y5S2 1711 aa47.69■■■■■ 5.22
CSNK1E-206ENST00000413574 PREX2Q70Z35 1606 aa47.67■■■■■ 5.22
CSNK1E-206ENST00000413574 CCNB3Q8WWL7 1395 aa47.65■■■■■ 5.22
CSNK1E-206ENST00000413574 GPATCH8Q9UKJ3 1502 aaKnown RBP47.65■■■■■ 5.22
CSNK1E-206ENST00000413574 ARHGAP5Q13017 1502 aa47.61■■■■■ 5.21
CSNK1E-206ENST00000413574 FANCAO15360 1455 aa47.6■■■■■ 5.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms