RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 EFTUD2Q15029 972 aaKnown RBP eCLIP30.04■■■□□ 2.45e-18■■■□□ 18.3
CSNK1E-206ENST00000413574 PRPF4O43172 522 aaKnown RBP eCLIP29.28■■■□□ 2.283e-16■■■□□ 15.7
CSNK1E-206ENST00000413574 DDX3XO00571 662 aaKnown RBP eCLIP32.14■■■□□ 2.745e-13■■■■□ 24.3
CSNK1E-206ENST00000413574 FMR1Q06787 632 aaKnown RBP eCLIP36.88■■■■□ 3.53e-11■■■■■ 66.2
CSNK1E-206ENST00000413574 SLTMQ9NWH9 1034 aaKnown RBP eCLIP31.78■■■□□ 2.684e-10■■■■□ 20.9
CSNK1E-206ENST00000413574 GTF2F1P35269 517 aaKnown RBP eCLIP32.77■■■□□ 2.842e-9■■■■■ 41.8
CSNK1E-206ENST00000413574 FTOQ9C0B1 505 aaKnown RBP eCLIP34.59■■■■□ 3.134e-9■■□□□ 11.5
CSNK1E-206ENST00000413574 NKRFO15226 690 aaKnown RBP eCLIP34.7■■■■□ 3.147e-9■■■□□ 16.7
CSNK1E-206ENST00000413574 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP31.93■■■□□ 2.71e-8■■□□□ 12.8
CSNK1E-206ENST00000413574 EIF3HO15372 352 aaKnown RBP eCLIP30.23■■■□□ 2.432e-8■□□□□ 9.9
CSNK1E-206ENST00000413574 NCBP2P52298 156 aaKnown RBP eCLIP28.51■■■□□ 2.154e-8■■□□□ 13.3
CSNK1E-206ENST00000413574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP48.04■■■■■ 5.288e-8■■□□□ 12.3
CSNK1E-206ENST00000413574 RBM15Q96T37 977 aaKnown RBP eCLIP30.91■■■□□ 2.542e-7■■■■■ 39.2
CSNK1E-206ENST00000413574 SF3A3Q12874 501 aaKnown RBP eCLIP28.67■■■□□ 2.182e-7■■■■■ 27.2
CSNK1E-206ENST00000413574 CDC40O60508 579 aaKnown RBP eCLIP27.81■■■□□ 2.042e-7■■□□□ 14
CSNK1E-206ENST00000413574 TBRG4Q969Z0 631 aaKnown RBP eCLIP30.21■■■□□ 2.432e-7■■■■■ 62.8
CSNK1E-206ENST00000413574 PPIGQ13427 754 aaKnown RBP eCLIP33.81■■■■□ 32e-7■■□□□ 13.3
CSNK1E-206ENST00000413574 DDX24Q9GZR7 859 aaKnown RBP eCLIP37.03■■■■□ 3.523e-7■■■□□ 15.9
CSNK1E-206ENST00000413574 YBX3P16989 372 aaKnown RBP eCLIP38.33■■■■□ 3.733e-7■□□□□ 10.1
CSNK1E-206ENST00000413574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP28.21■■■□□ 2.115e-7■■■■□ 26.1
CSNK1E-206ENST00000413574 ZNF622Q969S3 477 aaKnown RBP eCLIP38.52■■■■□ 3.765e-7■■□□□ 14.1
CSNK1E-206ENST00000413574 HLTFQ14527 1009 aaKnown RBP eCLIP30.29■■■□□ 2.447e-7■■■□□ 14.7
CSNK1E-206ENST00000413574 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.75■■■□□ 2.998e-7■■■■□ 21.8
CSNK1E-206ENST00000413574 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.95■■■□□ 2.869e-7■■■■■ 94.3
CSNK1E-206ENST00000413574 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP25.44■■□□□ 1.661e-6■■■□□ 15.9
CSNK1E-206ENST00000413574 AQRO60306 1485 aaKnown RBP eCLIP51.97■■■■■ 5.911e-6■■■■□ 21.7
CSNK1E-206ENST00000413574 SF3B4Q15427 424 aaKnown RBP eCLIP27.39■■□□□ 1.981e-6■□□□□ 9.8
CSNK1E-206ENST00000413574 PCBP2Q15366 365 aaKnown RBP eCLIP29.35■■■□□ 2.291e-6■■■■■ 27.4
CSNK1E-206ENST00000413574 CSTF2P33240 577 aaKnown RBP eCLIP29.45■■■□□ 2.31e-6■□□□□ 11.1
CSNK1E-206ENST00000413574 GRWD1Q9BQ67 446 aaKnown RBP eCLIP45.95■■■■■ 4.951e-6■■■□□ 14.6
CSNK1E-206ENST00000413574 SUB1P53999 127 aaKnown RBP eCLIP23.62■■□□□ 1.371e-6■■■■■ 30.8
CSNK1E-206ENST00000413574 RBM22Q9NW64 420 aaKnown RBP eCLIP31.05■■■□□ 2.562e-6■□□□□ 9.4
CSNK1E-206ENST00000413574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP32.36■■■□□ 2.772e-6■■□□□ 11.5
CSNK1E-206ENST00000413574 SF3B1O75533 1304 aaKnown RBP eCLIP32.96■■■□□ 2.872e-6■■■■■ 43.1
CSNK1E-206ENST00000413574 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.88■■■■□ 3.172e-6■■■■□ 25.6
CSNK1E-206ENST00000413574 METAP2P50579 478 aaKnown RBP eCLIP35.6■■■■□ 3.292e-6■■■■□ 21.2
CSNK1E-206ENST00000413574 SDAD1Q9NVU7 687 aaKnown RBP eCLIP28.36■■■□□ 2.132e-6■■□□□ 13.2
Retrieved 37 of 37 RNA–protein pairs in 8.9 ms