RNA–Protein interactions for RNA: ENST00000331826.11

PCSK6-201, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

TSL 5 BASIC

Gene PCSK6, Length 2,309 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-201ENST00000331826 SF3B1O75533 1304 aaKnown RBP eCLIP27.52■■■□□ 25e-6■■■■■ 168
PCSK6-201ENST00000331826 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.68■■■□□ 2.181e-6■■■■■ 137.8
PCSK6-201ENST00000331826 PCBP2Q15366 365 aaKnown RBP eCLIP26.1■■□□□ 1.772e-6■■■■■ 34.5
PCSK6-201ENST00000331826 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.15■■■□□ 2.17e-7■■■■■ 33.5
PCSK6-201ENST00000331826 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.6■■□□□ 1.851e-6■■■■■ 32.7
PCSK6-201ENST00000331826 GTF2F1P35269 517 aaKnown RBP eCLIP31.98■■■□□ 2.712e-10■■■■■ 30.6
PCSK6-201ENST00000331826 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.69■■□□□ 1.77e-7■■■■■ 30.4
PCSK6-201ENST00000331826 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.93■■■□□ 2.226e-7■■■■■ 29.7
PCSK6-201ENST00000331826 CDC40O60508 579 aaKnown RBP eCLIP24.11■■□□□ 1.456e-6■■■■■ 29.1
PCSK6-201ENST00000331826 SF3B4Q15427 424 aaKnown RBP eCLIP26.1■■□□□ 1.772e-8■■■■■ 27.3
PCSK6-201ENST00000331826 NCBP2P52298 156 aaKnown RBP eCLIP24.98■■□□□ 1.593e-7■■■■□ 25.2
PCSK6-201ENST00000331826 QKIQ96PU8 341 aaKnown RBP eCLIP27.36■■□□□ 1.972e-6■■■■□ 25.1
PCSK6-201ENST00000331826 AGGF1Q8N302 714 aaeCLIP28.3■■■□□ 2.129e-9■■■■□ 24.8
PCSK6-201ENST00000331826 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP25.07■■□□□ 1.64e-7■■■■□ 24.6
PCSK6-201ENST00000331826 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.96■■■□□ 2.555e-6■■■■□ 23.6
PCSK6-201ENST00000331826 U2AF2P26368 475 aaKnown RBP eCLIP31.69■■■□□ 2.661e-9■■■■□ 23
PCSK6-201ENST00000331826 MATR3P43243 847 aaKnown RBP eCLIP29.76■■■□□ 2.352e-6■■■■□ 21.4
PCSK6-201ENST00000331826 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.47■■■□□ 2.471e-6■■■■□ 21.2
PCSK6-201ENST00000331826 NONOQ15233 471 aaKnown RBP eCLIP29.46■■■□□ 2.313e-6■■■■□ 21
PCSK6-201ENST00000331826 DDX3XO00571 662 aaKnown RBP eCLIP29.06■■■□□ 2.243e-16■■■■□ 21
PCSK6-201ENST00000331826 HNRNPLP14866 589 aaKnown RBP eCLIP27.01■■□□□ 1.912e-6■■■■□ 20.8
PCSK6-201ENST00000331826 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.66■■■■□ 3.145e-6■■■■□ 20.8
PCSK6-201ENST00000331826 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.6■□□□□ 0.731e-7■■■■□ 20.7
PCSK6-201ENST00000331826 ILF3Q12906 894 aaKnown RBP eCLIP24.38■■□□□ 1.494e-6■■■■□ 20.5
PCSK6-201ENST00000331826 EFTUD2Q15029 972 aaKnown RBP eCLIP28.19■■■□□ 2.12e-6■■■□□ 18.8
PCSK6-201ENST00000331826 HNRNPMP52272 730 aaKnown RBP eCLIP35.36■■■■□ 3.251e-6■■■□□ 18.4
PCSK6-201ENST00000331826 CSTF2P33240 577 aaKnown RBP eCLIP25.49■■□□□ 1.672e-6■■■□□ 17.8
PCSK6-201ENST00000331826 PCBP1Q15365 356 aaKnown RBP eCLIP26.45■■□□□ 1.832e-6■■■□□ 17.3
PCSK6-201ENST00000331826 SF3A3Q12874 501 aaKnown RBP eCLIP29.07■■■□□ 2.241e-6■■■□□ 16.6
PCSK6-201ENST00000331826 RBM5P52756 815 aaKnown RBP eCLIP28.36■■■□□ 2.132e-8■■■□□ 16.5
PCSK6-201ENST00000331826 SFPQP23246 707 aaKnown RBP eCLIP31■■■□□ 2.551e-6■■■□□ 16
PCSK6-201ENST00000331826 PRPF4O43172 522 aaKnown RBP eCLIP28.26■■■□□ 2.112e-6■■■□□ 15.5
PCSK6-201ENST00000331826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.62■■■□□ 2.493e-7■■■□□ 15.5
PCSK6-201ENST00000331826 HNRNPKP61978 463 aaKnown RBP eCLIP23.11■■□□□ 1.292e-6■■■□□ 15.4
PCSK6-201ENST00000331826 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.11■■■□□ 2.899e-7■■■□□ 15.2
PCSK6-201ENST00000331826 HLTFQ14527 1009 aaKnown RBP eCLIP29.31■■■□□ 2.282e-6■■■□□ 14.8
PCSK6-201ENST00000331826 RBM22Q9NW64 420 aaKnown RBP eCLIP26.66■■□□□ 1.863e-6■■□□□ 14.3
PCSK6-201ENST00000331826 SLTMQ9NWH9 1034 aaKnown RBP eCLIP28.74■■■□□ 2.193e-6■■□□□ 14.1
PCSK6-201ENST00000331826 RPS3P23396 243 aaKnown RBP eCLIP25.82■■□□□ 1.723e-7■■□□□ 13
PCSK6-201ENST00000331826 ZNF622Q969S3 477 aaKnown RBP eCLIP28.25■■■□□ 2.114e-9■■□□□ 12.7
PCSK6-201ENST00000331826 PTBP1P26599 531 aaKnown RBP eCLIP25.05■■□□□ 1.61e-7■■□□□ 12
PCSK6-201ENST00000331826 AQRO60306 1485 aaKnown RBP eCLIP37.36■■■■□ 3.576e-7■■□□□ 11.9
PCSK6-201ENST00000331826 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.42■■□□□ 1.662e-6■■□□□ 11.5
PCSK6-201ENST00000331826 PPIGQ13427 754 aaKnown RBP eCLIP25.74■■□□□ 1.714e-9■□□□□ 11.1
PCSK6-201ENST00000331826 HNRNPCP07910 306 aaKnown RBP eCLIP26.96■■□□□ 1.914e-6■□□□□ 11.1
PCSK6-201ENST00000331826 SAFBQ15424 915 aaKnown RBP eCLIP30.37■■■□□ 2.453e-6■□□□□ 11
PCSK6-201ENST00000331826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.08■■■■□ 3.213e-8■□□□□ 11
PCSK6-201ENST00000331826 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.15■■■□□ 2.263e-7■□□□□ 10.9
PCSK6-201ENST00000331826 RBFOX2O43251 390 aaKnown RBP eCLIP22.34■■□□□ 1.175e-7■□□□□ 10.7
PCSK6-201ENST00000331826 NKRFO15226 690 aaKnown RBP eCLIP29.86■■■□□ 2.372e-8■□□□□ 10.3
PCSK6-201ENST00000331826 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.91■■□□□ 1.747e-6■□□□□ 9.5
PCSK6-201ENST00000331826 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP29.37■■■□□ 2.296e-7■□□□□ 9
PCSK6-201ENST00000331826 FTOQ9C0B1 505 aaKnown RBP eCLIP31.44■■■□□ 2.624e-8■□□□□ 8.9
PCSK6-201ENST00000331826 SRSF1Q07955 248 aaKnown RBP eCLIP20.46■□□□□ 0.873e-6■□□□□ 8.3
PCSK6-201ENST00000331826 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.51■■□□□ 1.992e-6■□□□□ 8
Retrieved 55 of 55 RNA–protein pairs in 13.5 ms