RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
CASC3-201ENST00000264645 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
CASC3-201ENST00000264645 ARID3CA6NKF2 412 aa20.21■□□□□ 0.83
CASC3-201ENST00000264645 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
CASC3-201ENST00000264645 CANXP27824 592 aaKnown RBP20.21■□□□□ 0.83
CASC3-201ENST00000264645 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
CASC3-201ENST00000264645 DDRGK1Q96HY6 314 aa20.11■□□□□ 0.81
CASC3-201ENST00000264645 CEP164Q9UPV0 1460 aa20.1■□□□□ 0.81
CASC3-201ENST00000264645 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.81
CASC3-201ENST00000264645 FANCIQ9NVI1 1328 aa20.08■□□□□ 0.8
CASC3-201ENST00000264645 CCNB3Q8WWL7 1395 aa20.07■□□□□ 0.8
CASC3-201ENST00000264645 ERICH6BQ5W0A0 696 aa20.07■□□□□ 0.8
CASC3-201ENST00000264645 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
CASC3-201ENST00000264645 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CASC3-201ENST00000264645 UPF2Q9HAU5 1272 aaKnown RBP20.05■□□□□ 0.8
CASC3-201ENST00000264645 CCDC88BA6NC98 1476 aa20.05■□□□□ 0.8
CASC3-201ENST00000264645 VPS8Q8N3P4 1428 aa20.04■□□□□ 0.8
CASC3-201ENST00000264645 RRP7BPQ9NSQ0 103 aa20.04■□□□□ 0.8
CASC3-201ENST00000264645 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
CASC3-201ENST00000264645 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
CASC3-201ENST00000264645 ANP32BQ92688 251 aaKnown RBP19.99■□□□□ 0.79
CASC3-201ENST00000264645 PRKCSHP14314 528 aaPredicted RBP19.98■□□□□ 0.79
CASC3-201ENST00000264645 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
CASC3-201ENST00000264645 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
CASC3-201ENST00000264645 HSP90AA1P07900 732 aaKnown RBP19.96■□□□□ 0.79
CASC3-201ENST00000264645 NAP1L5Q96NT1 182 aaPredicted RBP19.96■□□□□ 0.79
CASC3-201ENST00000264645 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.79
CASC3-201ENST00000264645 ZNF777Q9ULD5 760 aaPredicted RBP19.95■□□□□ 0.78
CASC3-201ENST00000264645 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
CASC3-201ENST00000264645 MTUS2Q5JR59 1369 aa19.93■□□□□ 0.78
CASC3-201ENST00000264645 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.92■□□□□ 0.78
CASC3-201ENST00000264645 PPP1R15AO75807 674 aaPredicted RBP19.91■□□□□ 0.78
CASC3-201ENST00000264645 KDM2AQ9Y2K7 1162 aa19.91■□□□□ 0.78
CASC3-201ENST00000264645 RGS3P49796 1198 aa19.9■□□□□ 0.78
CASC3-201ENST00000264645 HSPA5P11021 654 aaKnown RBP19.88■□□□□ 0.77
CASC3-201ENST00000264645 SETD5Q9C0A6 1442 aa19.87■□□□□ 0.77
CASC3-201ENST00000264645 BECN1Q14457 450 aa19.86■□□□□ 0.77
CASC3-201ENST00000264645 TRIM44Q96DX7 344 aaPredicted RBP19.85■□□□□ 0.77
CASC3-201ENST00000264645 MSH5O43196 834 aa19.83■□□□□ 0.77
CASC3-201ENST00000264645 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
CASC3-201ENST00000264645 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
CASC3-201ENST00000264645 RUSC2Q8N2Y8 1516 aa19.77■□□□□ 0.76
CASC3-201ENST00000264645 TCERG1O14776 1098 aaKnown RBP19.76■□□□□ 0.75
CASC3-201ENST00000264645 IL27Q8NEV9 243 aa19.76■□□□□ 0.75
CASC3-201ENST00000264645 ARID4BQ4LE39 1312 aaPredicted RBP19.76■□□□□ 0.75
CASC3-201ENST00000264645 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
CASC3-201ENST00000264645 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
CASC3-201ENST00000264645 NUDCQ9Y266 331 aa19.72■□□□□ 0.75
CASC3-201ENST00000264645 USP35Q9P2H5 1018 aa19.71■□□□□ 0.75
CASC3-201ENST00000264645 SLC4A3P48751 1232 aa19.69■□□□□ 0.74
CASC3-201ENST00000264645 RCAN3Q9UKA8 241 aa19.67■□□□□ 0.74
CASC3-201ENST00000264645 GSE1Q14687 1217 aa19.67■□□□□ 0.74
CASC3-201ENST00000264645 CARD11Q9BXL7 1154 aa19.66■□□□□ 0.74
CASC3-201ENST00000264645 PDE4AP27815 886 aa19.66■□□□□ 0.74
CASC3-201ENST00000264645 SLKQ9H2G2 1235 aaPredicted RBP19.65■□□□□ 0.74
CASC3-201ENST00000264645 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
CASC3-201ENST00000264645 FOXD1Q16676 465 aa19.64■□□□□ 0.74
CASC3-201ENST00000264645 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
CASC3-201ENST00000264645 L1TD1Q5T7N2 865 aaKnown RBP19.62■□□□□ 0.73
CASC3-201ENST00000264645 SPRYD3Q8NCJ5 442 aa19.62■□□□□ 0.73
CASC3-201ENST00000264645 GZF1Q9H116 711 aaPredicted RBP19.61■□□□□ 0.73
CASC3-201ENST00000264645 PRKRIP1Q9H875 184 aaPredicted RBP19.61■□□□□ 0.73
CASC3-201ENST00000264645 BAZ1AQ9NRL2 1556 aaPredicted RBP19.6■□□□□ 0.73
CASC3-201ENST00000264645 ZBED9Q6R2W3 1325 aa19.59■□□□□ 0.73
CASC3-201ENST00000264645 RAPGEF2Q9Y4G8 1499 aa19.59■□□□□ 0.73
CASC3-201ENST00000264645 VSIG10Q8N0Z9 540 aa19.58■□□□□ 0.73
CASC3-201ENST00000264645 RGL3Q3MIN7 710 aa19.58■□□□□ 0.72
CASC3-201ENST00000264645 CC2D1BQ5T0F9 858 aaKnown RBP19.58■□□□□ 0.72
CASC3-201ENST00000264645 WIZO95785 1651 aa19.57■□□□□ 0.72
CASC3-201ENST00000264645 RSPH6AQ9H0K4 717 aa19.57■□□□□ 0.72
CASC3-201ENST00000264645 NCLP19338 710 aaKnown RBP19.56■□□□□ 0.72
CASC3-201ENST00000264645 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.56■□□□□ 0.721e-7■■□□□ 13.4
CASC3-201ENST00000264645 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
CASC3-201ENST00000264645 BRPF3Q9ULD4 1205 aa19.56■□□□□ 0.72
CASC3-201ENST00000264645 FBLN2P98095 1184 aa19.55■□□□□ 0.72
CASC3-201ENST00000264645 L3MBTL2Q969R5 705 aa19.53■□□□□ 0.72
CASC3-201ENST00000264645 FRAT1Q92837 279 aaPredicted RBP19.53■□□□□ 0.72
CASC3-201ENST00000264645 GOLGA6L22H0YM25 854 aa19.52■□□□□ 0.71
CASC3-201ENST00000264645 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
CASC3-201ENST00000264645 HSP90AA2PQ14568 343 aaPredicted RBP19.49■□□□□ 0.71
CASC3-201ENST00000264645 PLIN1O60240 522 aa19.47■□□□□ 0.71
CASC3-201ENST00000264645 TSPY4P0CV99 314 aa19.47■□□□□ 0.71
CASC3-201ENST00000264645 TSPY10P0CW01 314 aa19.47■□□□□ 0.71
CASC3-201ENST00000264645 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
CASC3-201ENST00000264645 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
CASC3-201ENST00000264645 DNTTIP2Q5QJE6 756 aaKnown RBP19.45■□□□□ 0.7
CASC3-201ENST00000264645 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
CASC3-201ENST00000264645 ARID3AQ99856 593 aa19.45■□□□□ 0.7
CASC3-201ENST00000264645 TNNT2P45379 298 aaPredicted RBP19.44■□□□□ 0.7
CASC3-201ENST00000264645 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
CASC3-201ENST00000264645 ARHGAP35Q9NRY4 1499 aa19.43■□□□□ 0.7
CASC3-201ENST00000264645 GOLGA6L3A6NEY3 463 aa19.43■□□□□ 0.7
CASC3-201ENST00000264645 PTMAP06454 111 aaKnown RBP19.43■□□□□ 0.7
CASC3-201ENST00000264645 RRP1P56182 461 aaKnown RBP19.43■□□□□ 0.7
CASC3-201ENST00000264645 DCAF11Q8TEB1 546 aa19.38■□□□□ 0.69
CASC3-201ENST00000264645 MSNP26038 577 aaKnown RBP19.38■□□□□ 0.69
CASC3-201ENST00000264645 CARMIL1Q5VZK9 1371 aa19.37■□□□□ 0.69
CASC3-201ENST00000264645 HSP90AB1P08238 724 aaKnown RBP19.37■□□□□ 0.69
CASC3-201ENST00000264645 MS4A1P11836 297 aa19.37■□□□□ 0.69
CASC3-201ENST00000264645 CCDC184Q52MB2 194 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms