RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 FTSJ3Q8IY81 847 aaKnown RBP19.36■□□□□ 0.69
CASC3-201ENST00000264645 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
CASC3-201ENST00000264645 HSCBQ8IWL3 235 aa19.36■□□□□ 0.69
CASC3-201ENST00000264645 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
CASC3-201ENST00000264645 MYH16Q9H6N6 1097 aa19.35■□□□□ 0.69
CASC3-201ENST00000264645 SLC24A1O60721 1099 aa19.34■□□□□ 0.69
CASC3-201ENST00000264645 FAM161AQ3B820 660 aa19.34■□□□□ 0.69
CASC3-201ENST00000264645 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
CASC3-201ENST00000264645 NACADO15069 1562 aa19.33■□□□□ 0.69
CASC3-201ENST00000264645 RALBP1Q15311 655 aa19.33■□□□□ 0.69
CASC3-201ENST00000264645 TPRNQ4KMQ1 711 aa19.33■□□□□ 0.69
CASC3-201ENST00000264645 CFDP1Q9UEE9 299 aaPredicted RBP19.32■□□□□ 0.68
CASC3-201ENST00000264645 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
CASC3-201ENST00000264645 PDE3BQ13370 1112 aa19.32■□□□□ 0.68
CASC3-201ENST00000264645 KTN1Q86UP2 1357 aaKnown RBP19.31■□□□□ 0.68
CASC3-201ENST00000264645 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
CASC3-201ENST00000264645 ZBTB7CA1YPR0 619 aa19.3■□□□□ 0.68
CASC3-201ENST00000264645 NLRP13Q86W25 1043 aa19.29■□□□□ 0.68
CASC3-201ENST00000264645 CUX2O14529 1486 aa19.29■□□□□ 0.68
CASC3-201ENST00000264645 PKNOX2Q96KN3 472 aa19.29■□□□□ 0.68
CASC3-201ENST00000264645 FRAT2O75474 233 aaPredicted RBP19.28■□□□□ 0.68
CASC3-201ENST00000264645 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
CASC3-201ENST00000264645 PKD2Q13563 968 aa19.27■□□□□ 0.68
CASC3-201ENST00000264645 KIF21BO75037 1637 aa19.26■□□□□ 0.67
CASC3-201ENST00000264645 CENPQQ7L2Z9 268 aaPredicted RBP19.25■□□□□ 0.67
CASC3-201ENST00000264645 PLCB2Q00722 1185 aa19.25■□□□□ 0.67
CASC3-201ENST00000264645 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
CASC3-201ENST00000264645 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
CASC3-201ENST00000264645 WDR97A6NE52 1622 aa19.23■□□□□ 0.67
CASC3-201ENST00000264645 MFAP1P55081 439 aaKnown RBP19.22■□□□□ 0.67
CASC3-201ENST00000264645 KIF7Q2M1P5 1343 aa19.22■□□□□ 0.67
CASC3-201ENST00000264645 TMF1P82094 1093 aa19.21■□□□□ 0.67
CASC3-201ENST00000264645 GOLGA2Q08379 1002 aa19.21■□□□□ 0.67
CASC3-201ENST00000264645 CNTLNQ9NXG0 1405 aa19.21■□□□□ 0.67
CASC3-201ENST00000264645 GBP4Q96PP9 640 aa19.2■□□□□ 0.66
CASC3-201ENST00000264645 MYBBP1AQ9BQG0 1328 aaKnown RBP19.2■□□□□ 0.66
CASC3-201ENST00000264645 CDCA8Q53HL2 280 aa19.2■□□□□ 0.66
CASC3-201ENST00000264645 AMER1Q5JTC6 1135 aaPredicted RBP19.19■□□□□ 0.66
CASC3-201ENST00000264645 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
CASC3-201ENST00000264645 PHLDB1Q86UU1 1377 aa19.19■□□□□ 0.66
CASC3-201ENST00000264645 ST20-MTHFSA0A0A6YYL1 179 aa19.19■□□□□ 0.66
CASC3-201ENST00000264645 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
CASC3-201ENST00000264645 CLUAP1Q96AJ1 413 aa19.17■□□□□ 0.66
CASC3-201ENST00000264645 FHOD3Q2V2M9 1422 aa19.16■□□□□ 0.66
CASC3-201ENST00000264645 FAM43AQ8N2R8 423 aa19.15■□□□□ 0.66
CASC3-201ENST00000264645 FOXD4L1Q9NU39 408 aa19.15■□□□□ 0.66
CASC3-201ENST00000264645 CCDC146Q8IYE0 955 aa19.15■□□□□ 0.66
CASC3-201ENST00000264645 KIF15Q9NS87 1388 aa19.15■□□□□ 0.66
CASC3-201ENST00000264645 CDCA7LQ96GN5 454 aa19.14■□□□□ 0.65
CASC3-201ENST00000264645 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
CASC3-201ENST00000264645 CDK11BP21127 795 aaKnown RBP19.13■□□□□ 0.65
CASC3-201ENST00000264645 RWDD1Q9H446 243 aaPredicted RBP19.12■□□□□ 0.65
CASC3-201ENST00000264645 UBE2Q2Q8WVN8 375 aa19.11■□□□□ 0.65
CASC3-201ENST00000264645 SENP3Q9H4L4 574 aaPredicted RBP19.11■□□□□ 0.65
CASC3-201ENST00000264645 ROCK2O75116 1388 aaKnown RBP19.1■□□□□ 0.65
CASC3-201ENST00000264645 SKAP1Q86WV1 359 aa19.1■□□□□ 0.65
CASC3-201ENST00000264645 USP47Q96K76 1375 aa19.09■□□□□ 0.65
CASC3-201ENST00000264645 ARAP1Q96P48 1450 aa19.08■□□□□ 0.65
CASC3-201ENST00000264645 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.64
CASC3-201ENST00000264645 PMFBP1Q8TBY8 1022 aa19.07■□□□□ 0.64
CASC3-201ENST00000264645 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
CASC3-201ENST00000264645 COG6Q9Y2V7 657 aa19.06■□□□□ 0.64
CASC3-201ENST00000264645 UACAQ9BZF9 1416 aa19.05■□□□□ 0.64
CASC3-201ENST00000264645 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
CASC3-201ENST00000264645 DDX11L8A8MPP1 907 aa19.05■□□□□ 0.64
CASC3-201ENST00000264645 U2SURPO15042 1029 aaKnown RBP19.03■□□□□ 0.64
CASC3-201ENST00000264645 CENPJQ9HC77 1338 aaPredicted RBP19.03■□□□□ 0.64
CASC3-201ENST00000264645 CALD1Q05682 793 aaKnown RBP19.03■□□□□ 0.64
CASC3-201ENST00000264645 CASC1Q6TDU7 716 aa19.03■□□□□ 0.64
CASC3-201ENST00000264645 BCL2L13Q9BXK5 485 aa19.03■□□□□ 0.64
CASC3-201ENST00000264645 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
CASC3-201ENST00000264645 PANK3Q9H999 370 aa19.02■□□□□ 0.64
CASC3-201ENST00000264645 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
CASC3-201ENST00000264645 CHAF1AQ13111 956 aaPredicted RBP19.01■□□□□ 0.63
CASC3-201ENST00000264645 NUP155O75694 1391 aa19.01■□□□□ 0.63
CASC3-201ENST00000264645 SMARCA2P51531 1590 aa19.01■□□□□ 0.63
CASC3-201ENST00000264645 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
CASC3-201ENST00000264645 DDX49Q9Y6V7 483 aaKnown RBP19.01■□□□□ 0.63
CASC3-201ENST00000264645 PTMSP20962 102 aa19■□□□□ 0.63
CASC3-201ENST00000264645 CHMP5Q9NZZ3 219 aa18.99■□□□□ 0.63
CASC3-201ENST00000264645 POGKQ9P215 609 aa18.99■□□□□ 0.63
CASC3-201ENST00000264645 KIAA2012Q0VF49 1180 aa18.98■□□□□ 0.63
CASC3-201ENST00000264645 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
CASC3-201ENST00000264645 C11orf95C9JLR9 678 aaPredicted RBP18.97■□□□□ 0.63
CASC3-201ENST00000264645 MRE11P49959 708 aa18.97■□□□□ 0.63
CASC3-201ENST00000264645 NBPF8Q3BBV2 869 aa18.97■□□□□ 0.63
CASC3-201ENST00000264645 A0A0U1RQG5 324 aaPredicted RBP18.96■□□□□ 0.63
CASC3-201ENST00000264645 APAF1O14727 1248 aa18.96■□□□□ 0.63
CASC3-201ENST00000264645 MORC1Q86VD1 984 aa18.96■□□□□ 0.63
CASC3-201ENST00000264645 CGNL1Q0VF96 1302 aa18.96■□□□□ 0.62
CASC3-201ENST00000264645 TRAK2O60296 914 aa18.95■□□□□ 0.62
CASC3-201ENST00000264645 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
CASC3-201ENST00000264645 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
CASC3-201ENST00000264645 APBB1O00213 710 aa18.93■□□□□ 0.62
CASC3-201ENST00000264645 SMC4Q9NTJ3 1288 aa18.91■□□□□ 0.62
CASC3-201ENST00000264645 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
CASC3-201ENST00000264645 U2AF1L5P0DN76 240 aaPredicted RBP18.9■□□□□ 0.62
CASC3-201ENST00000264645 U2AF1Q01081 240 aaKnown RBP eCLIP18.9■□□□□ 0.622e-7■■■□□ 15
CASC3-201ENST00000264645 FOXD4L5Q5VV16 416 aaPredicted RBP18.9■□□□□ 0.62
CASC3-201ENST00000264645 FOXD4L4Q8WXT5 416 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms