RNA–Protein interactions for RNA: ENSMUST00000201321.1

Ptn-202, Transcript of Pleiotrophin, mousemouse

TSL 1 (best) BASIC

Gene Ptn, Length 2,558 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptn-202ENSMUST00000201321 Rpgrip1Q9EPQ2 1331 aa23.05■■□□□ 1.28
Ptn-202ENSMUST00000201321 Acin1Q9JIX8 1338 aaKnown RBP22.23■■□□□ 1.15
Ptn-202ENSMUST00000201321 Pcgf6Q99NA9 353 aa22.22■■□□□ 1.15
Ptn-202ENSMUST00000201321 Rtl1Q7M732 1744 aa21.67■■□□□ 1.06
Ptn-202ENSMUST00000201321 Ccdc180J3QNE4 1664 aa21.65■■□□□ 1.06
Ptn-202ENSMUST00000201321 Neurod1Q60867 357 aa21.58■■□□□ 1.04
Ptn-202ENSMUST00000201321 Ehmt2Q9Z148 1263 aaKnown RBP21.56■■□□□ 1.04
Ptn-202ENSMUST00000201321 Supt5hO55201 1082 aaKnown RBP21.44■■□□□ 1.02
Ptn-202ENSMUST00000201321 Trim41Q5NCC3 630 aa21.37■■□□□ 1.01
Ptn-202ENSMUST00000201321 Las1lA2BE28 776 aaKnown RBP21.34■■□□□ 1.01
Ptn-202ENSMUST00000201321 NischQ80TM9 1593 aa21.26■□□□□ 0.99
Ptn-202ENSMUST00000201321 1700123L14RikQ3V2K7 440 aa21.22■□□□□ 0.99
Ptn-202ENSMUST00000201321 Rhox8Q6VSS7 320 aa21.19■□□□□ 0.98
Ptn-202ENSMUST00000201321 CenpbP27790 599 aa21.14■□□□□ 0.98
Ptn-202ENSMUST00000201321 Myt1Q8CFC2 1127 aa21.11■□□□□ 0.97
Ptn-202ENSMUST00000201321 Dcaf1Q80TR8 1506 aa21.08■□□□□ 0.97
Ptn-202ENSMUST00000201321 DiexfQ8BTT6 772 aaKnown RBP21.07■□□□□ 0.96
Ptn-202ENSMUST00000201321 Csrnp3P59055 597 aa20.9■□□□□ 0.94
Ptn-202ENSMUST00000201321 Zcchc6Q5BLK4 1491 aaKnown RBP20.78■□□□□ 0.92
Ptn-202ENSMUST00000201321 Bcl11aQ9QYE3 773 aa20.76■□□□□ 0.91
Ptn-202ENSMUST00000201321 Anks4bQ8K3X6 423 aa20.73■□□□□ 0.91
Ptn-202ENSMUST00000201321 Abcc9P70170 1546 aa20.69■□□□□ 0.9
Ptn-202ENSMUST00000201321 Aplp2Q06335 707 aa20.56■□□□□ 0.88
Ptn-202ENSMUST00000201321 Zeb1Q64318 1117 aa20.49■□□□□ 0.87
Ptn-202ENSMUST00000201321 HrcG5E8J6 738 aa20.48■□□□□ 0.87
Ptn-202ENSMUST00000201321 Cngb1E1AZ71 1325 aa20.46■□□□□ 0.87
Ptn-202ENSMUST00000201321 Sall2Q9QX96 1004 aa20.45■□□□□ 0.86
Ptn-202ENSMUST00000201321 PrkcshO08795 521 aa20.33■□□□□ 0.85
Ptn-202ENSMUST00000201321 Gm38655A0A286YDK6 273 aa20.31■□□□□ 0.84
Ptn-202ENSMUST00000201321 Gm35339A0A140LHH9 1649 aa20.13■□□□□ 0.81
Ptn-202ENSMUST00000201321 Ifnlr1Q8CGK5 535 aa20.05■□□□□ 0.8
Ptn-202ENSMUST00000201321 NefmP08553 848 aa20.02■□□□□ 0.8
Ptn-202ENSMUST00000201321 Cdk11bP24788 784 aaKnown RBP20.02■□□□□ 0.8
Ptn-202ENSMUST00000201321 Fam71e1A1L3C1 212 aa19.99■□□□□ 0.79
Ptn-202ENSMUST00000201321 Nop58Q6DFW4 536 aaKnown RBP19.92■□□□□ 0.78
Ptn-202ENSMUST00000201321 Amer1Q7TS75 1132 aa19.87■□□□□ 0.77
Ptn-202ENSMUST00000201321 Abcc8B2RUS7 1588 aa19.84■□□□□ 0.77
Ptn-202ENSMUST00000201321 Mier1Q5UAK0 511 aa19.81■□□□□ 0.76
Ptn-202ENSMUST00000201321 Aebp2Q9Z248 504 aaKnown RBP19.78■□□□□ 0.76
Ptn-202ENSMUST00000201321 Wdr66E9Q743 1299 aa19.74■□□□□ 0.75
Ptn-202ENSMUST00000201321 Mapk8ip2Q9ERE9 830 aa19.73■□□□□ 0.75
Ptn-202ENSMUST00000201321 SafbD3YXK2 937 aaKnown RBP19.64■□□□□ 0.73
Ptn-202ENSMUST00000201321 ClspnQ80YR7 1315 aa19.61■□□□□ 0.73
Ptn-202ENSMUST00000201321 Ppargc1bQ8VHJ7 1014 aa19.61■□□□□ 0.73
Ptn-202ENSMUST00000201321 Ccdc136Q3TVA9 1136 aa19.55■□□□□ 0.72
Ptn-202ENSMUST00000201321 Cep164Q5DU05 1446 aa19.51■□□□□ 0.71
Ptn-202ENSMUST00000201321 Hnrnpul2Q00PI9 745 aaKnown RBP19.5■□□□□ 0.71
Ptn-202ENSMUST00000201321 Hdac5Q9Z2V6 1113 aa19.4■□□□□ 0.7
Ptn-202ENSMUST00000201321 Tnnt3Q9QZ47 272 aa19.27■□□□□ 0.67
Ptn-202ENSMUST00000201321 Anp32aO35381 247 aa19.25■□□□□ 0.67
Ptn-202ENSMUST00000201321 Rtl5Q5DTT4 599 aa19.24■□□□□ 0.67
Ptn-202ENSMUST00000201321 Fgd1P52734 960 aa19.21■□□□□ 0.67
Ptn-202ENSMUST00000201321 Pknox2Q8BG99 474 aa19.11■□□□□ 0.65
Ptn-202ENSMUST00000201321 Nolc1E9Q5C9 702 aaKnown RBP19.1■□□□□ 0.65
Ptn-202ENSMUST00000201321 Ap3b1Q9Z1T1 1105 aa19.1■□□□□ 0.65
Ptn-202ENSMUST00000201321 Gab3Q8BSM5 595 aa19.08■□□□□ 0.64
Ptn-202ENSMUST00000201321 NrdcQ8BHG1 1161 aa19.03■□□□□ 0.64
Ptn-202ENSMUST00000201321 Ttbk1Q6PCN3 1308 aa19.01■□□□□ 0.63
Ptn-202ENSMUST00000201321 Il27Q8K3I6 234 aa19■□□□□ 0.63
Ptn-202ENSMUST00000201321 Pelp1Q9DBD5 1123 aaKnown RBP18.99■□□□□ 0.63
Ptn-202ENSMUST00000201321 TonslQ6NZL6 1363 aa18.99■□□□□ 0.63
Ptn-202ENSMUST00000201321 Gtf3c3Q3TMP1 882 aa18.98■□□□□ 0.63
Ptn-202ENSMUST00000201321 Plcd4Q8K3R3 807 aa18.97■□□□□ 0.63
Ptn-202ENSMUST00000201321 Supt16hQ920B9 1047 aa18.95■□□□□ 0.62
Ptn-202ENSMUST00000201321 UbtfP25976 765 aaKnown RBP18.93■□□□□ 0.62
Ptn-202ENSMUST00000201321 Chic1Q8CBW7 227 aa18.91■□□□□ 0.62
Ptn-202ENSMUST00000201321 Upf2A2AT37 1269 aaKnown RBP18.89■□□□□ 0.62
Ptn-202ENSMUST00000201321 Znf710Q3U288 666 aa18.88■□□□□ 0.61
Ptn-202ENSMUST00000201321 Rsf1E9PWW9 1441 aaKnown RBP18.88■□□□□ 0.61
Ptn-202ENSMUST00000201321 Calr4Q3TQS0 420 aa18.78■□□□□ 0.6
Ptn-202ENSMUST00000201321 Irx3P81067 507 aa18.75■□□□□ 0.59
Ptn-202ENSMUST00000201321 Rb1cc1Q9ESK9 1588 aa18.74■□□□□ 0.59
Ptn-202ENSMUST00000201321 Ccdc27Q3V036 639 aa18.69■□□□□ 0.58
Ptn-202ENSMUST00000201321 Pak3Q61036 559 aa18.64■□□□□ 0.57
Ptn-202ENSMUST00000201321 Ipo4Q8VI75 1082 aa18.62■□□□□ 0.57
Ptn-202ENSMUST00000201321 Ccdc9Q8VC31 543 aaKnown RBP18.6■□□□□ 0.57
Ptn-202ENSMUST00000201321 Ppp4r2Q0VGB7 417 aa18.59■□□□□ 0.57
Ptn-202ENSMUST00000201321 Ccdc88bQ4QRL3 1481 aa18.57■□□□□ 0.56
Ptn-202ENSMUST00000201321 Rpap1Q80TE0 1409 aa18.55■□□□□ 0.56
Ptn-202ENSMUST00000201321 Stra8P70278 393 aa18.53■□□□□ 0.56
Ptn-202ENSMUST00000201321 Egfem1Q8C088 590 aa18.52■□□□□ 0.56
Ptn-202ENSMUST00000201321 Wdr43Q6ZQL4 677 aaKnown RBP18.52■□□□□ 0.56
Ptn-202ENSMUST00000201321 Liat1Q810M6 228 aa18.51■□□□□ 0.55
Ptn-202ENSMUST00000201321 Baz1aO88379 1555 aa18.51■□□□□ 0.55
Ptn-202ENSMUST00000201321 Kcnn1Q9EQR3 537 aa18.48■□□□□ 0.55
Ptn-202ENSMUST00000201321 Washc2Q6PGL7 1334 aa18.48■□□□□ 0.55
Ptn-202ENSMUST00000201321 Hsp90aa1P07901 733 aaKnown RBP18.46■□□□□ 0.55
Ptn-202ENSMUST00000201321 NacadQ5SWP3 1504 aa18.46■□□□□ 0.55
Ptn-202ENSMUST00000201321 Zfp777B9EKF4 885 aa18.37■□□□□ 0.53
Ptn-202ENSMUST00000201321 Ccer2J3QPU5 274 aa18.37■□□□□ 0.53
Ptn-202ENSMUST00000201321 Eid3Q3V124 375 aa18.33■□□□□ 0.52
Ptn-202ENSMUST00000201321 Ncapd3Q6ZQK0 1506 aa18.31■□□□□ 0.52
Ptn-202ENSMUST00000201321 Ipo9Q91YE6 1041 aa18.3■□□□□ 0.52
Ptn-202ENSMUST00000201321 AampJ3QN89 436 aa18.26■□□□□ 0.51
Ptn-202ENSMUST00000201321 4933416C03RikQ3V063 378 aa18.24■□□□□ 0.51
Ptn-202ENSMUST00000201321 Smarca2Q6DIC0 1577 aa18.23■□□□□ 0.51
Ptn-202ENSMUST00000201321 Rtn4Q99P72 1162 aaKnown RBP18.22■□□□□ 0.51
Ptn-202ENSMUST00000201321 Iqcf3Q9D498 203 aa18.21■□□□□ 0.51
Ptn-202ENSMUST00000201321 Slc24a1Q91WD8 1130 aa18.19■□□□□ 0.5
Ptn-202ENSMUST00000201321 Eif5bQ05D44 1216 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms