RNA–Protein interactions for RNA: ENSMUST00000124394.2

Gm28050-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28050, Length 449 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28050-201ENSMUST00000124394 Gm35339A0A140LHH9 1649 aa35.26■■■■□ 3.24
Gm28050-201ENSMUST00000124394 Abcc9P70170 1546 aa34.64■■■■□ 3.14
Gm28050-201ENSMUST00000124394 NischQ80TM9 1593 aa34.18■■■■□ 3.06
Gm28050-201ENSMUST00000124394 Abcc8B2RUS7 1588 aa33.46■■■□□ 2.95
Gm28050-201ENSMUST00000124394 ScribQ80U72 1612 aa33.31■■■□□ 2.92
Gm28050-201ENSMUST00000124394 Dnajc5bQ9CQ94 199 aa32.84■■■□□ 2.85
Gm28050-201ENSMUST00000124394 NacadQ5SWP3 1504 aa31.87■■■□□ 2.69
Gm28050-201ENSMUST00000124394 Kdm5dQ62240 1548 aa31.78■■■□□ 2.68
Gm28050-201ENSMUST00000124394 Sycp2Q9CUU3 1500 aa31.36■■■□□ 2.61
Gm28050-201ENSMUST00000124394 BicraF8VPZ9 1578 aa31.3■■■□□ 2.6
Gm28050-201ENSMUST00000124394 Dnajc5P60904 198 aa31.09■■■□□ 2.57
Gm28050-201ENSMUST00000124394 Thoc2B1AZI6 1594 aaKnown RBP31.01■■■□□ 2.56
Gm28050-201ENSMUST00000124394 Pds5bQ4VA53 1446 aaKnown RBP30.56■■■□□ 2.48
Gm28050-201ENSMUST00000124394 Cc2d2aQ8CFW7 1633 aa30.51■■■□□ 2.47
Gm28050-201ENSMUST00000124394 Dcaf1Q80TR8 1506 aa30.42■■■□□ 2.46
Gm28050-201ENSMUST00000124394 Trim41Q5NCC3 630 aa30.29■■■□□ 2.44
Gm28050-201ENSMUST00000124394 Atad2bE9Q166 1460 aaKnown RBP29.98■■■□□ 2.39
Gm28050-201ENSMUST00000124394 Ercc6F8VPZ5 1481 aa29.94■■■□□ 2.38
Gm28050-201ENSMUST00000124394 Fam135aQ6NS59 1506 aa29.93■■■□□ 2.38
Gm28050-201ENSMUST00000124394 Rb1cc1Q9ESK9 1588 aa29.71■■■□□ 2.35
Gm28050-201ENSMUST00000124394 Smarca2Q6DIC0 1577 aa29.52■■■□□ 2.32
Gm28050-201ENSMUST00000124394 Phldb1Q6PDH0 1371 aaKnown RBP29.34■■■□□ 2.29
Gm28050-201ENSMUST00000124394 Iqgap2Q3UQ44 1575 aa29.3■■■□□ 2.28
Gm28050-201ENSMUST00000124394 Baz1bQ9Z277 1479 aa29.28■■■□□ 2.28
Gm28050-201ENSMUST00000124394 Wdr62Q3U3T8 1523 aa29.26■■■□□ 2.27
Gm28050-201ENSMUST00000124394 Mrc2Q64449 1479 aa29.25■■■□□ 2.27
Gm28050-201ENSMUST00000124394 Frmpd1A2AKB4 1549 aa29.25■■■□□ 2.27
Gm28050-201ENSMUST00000124394 Ubl4bQ9CQ84 188 aa29.24■■■□□ 2.27
Gm28050-201ENSMUST00000124394 Smarca4Q3TKT4 1613 aaKnown RBP29.2■■■□□ 2.26
Gm28050-201ENSMUST00000124394 Baz1aO88379 1555 aa29.09■■■□□ 2.25
Gm28050-201ENSMUST00000124394 Zcchc6Q5BLK4 1491 aaKnown RBP29.04■■■□□ 2.24
Gm28050-201ENSMUST00000124394 Crybg2B7ZCC2 1516 aa29.02■■■□□ 2.24
Gm28050-201ENSMUST00000124394 Unc13aQ4KUS2 1712 aa28.94■■■□□ 2.22
Gm28050-201ENSMUST00000124394 Lrriq1Q0P5X1 1673 aa28.85■■■□□ 2.21
Gm28050-201ENSMUST00000124394 Shroom2A2ALU4 1481 aa28.79■■■□□ 2.2
Gm28050-201ENSMUST00000124394 Col17a1Q07563 1470 aa28.78■■■□□ 2.2
Gm28050-201ENSMUST00000124394 Cecr2E9Q2Z1 1453 aa28.76■■■□□ 2.19
Gm28050-201ENSMUST00000124394 Ccdc180J3QNE4 1664 aa28.74■■■□□ 2.19
Gm28050-201ENSMUST00000124394 Rsf1E9PWW9 1441 aaKnown RBP28.63■■■□□ 2.17
Gm28050-201ENSMUST00000124394 Eif4g3Q80XI3 1579 aaKnown RBP28.33■■■□□ 2.13
Gm28050-201ENSMUST00000124394 Pcdh10E9PXQ7 1057 aa28.32■■■□□ 2.12
Gm28050-201ENSMUST00000124394 Top2bQ64511 1612 aa28.27■■■□□ 2.12
Gm28050-201ENSMUST00000124394 Kif21aQ9QXL2 1672 aa28.26■■■□□ 2.12
Gm28050-201ENSMUST00000124394 Pabpn1Q8CCS6 302 aaKnown RBP28.26■■■□□ 2.11
Gm28050-201ENSMUST00000124394 Rhox8Q6VSS7 320 aa28.13■■■□□ 2.09
Gm28050-201ENSMUST00000124394 Pelp1Q9DBD5 1123 aaKnown RBP28.06■■■□□ 2.08
Gm28050-201ENSMUST00000124394 Cux2P70298 1426 aa28.01■■■□□ 2.08
Gm28050-201ENSMUST00000124394 Zcchc11B2RX14 1644 aaKnown RBP27.98■■■□□ 2.07
Gm28050-201ENSMUST00000124394 Arhgef5E9Q7D5 1581 aa27.9■■■□□ 2.06
Gm28050-201ENSMUST00000124394 Cttnbp2B9EJA2 1648 aa27.74■■■□□ 2.03
Gm28050-201ENSMUST00000124394 Kif15Q6P9L6 1387 aa27.7■■■□□ 2.02
Gm28050-201ENSMUST00000124394 CftrP26361 1476 aa27.7■■■□□ 2.02
Gm28050-201ENSMUST00000124394 Urb2E9Q7L1 1524 aaKnown RBP27.69■■■□□ 2.02
Gm28050-201ENSMUST00000124394 Plb1Q3TTY0 1478 aa27.68■■■□□ 2.02
Gm28050-201ENSMUST00000124394 Ttbk1Q6PCN3 1308 aa27.67■■■□□ 2.02
Gm28050-201ENSMUST00000124394 Synj1Q8CHC4 1574 aa27.58■■■□□ 2.01
Gm28050-201ENSMUST00000124394 Npm1Q61937 292 aaKnown RBP27.58■■■□□ 2.01
Gm28050-201ENSMUST00000124394 Adgrl3Q80TS3 1537 aa27.5■■□□□ 1.99
Gm28050-201ENSMUST00000124394 Rusc2Q80U22 1514 aa27.42■■□□□ 1.98
Gm28050-201ENSMUST00000124394 Cep164Q5DU05 1446 aa27.33■■□□□ 1.97
Gm28050-201ENSMUST00000124394 Dhx29Q6PGC1 1365 aaKnown RBP27.3■■□□□ 1.96
Gm28050-201ENSMUST00000124394 PtprtQ99M80 1454 aa27.3■■□□□ 1.96
Gm28050-201ENSMUST00000124394 Plekhg3Q4VAC9 1341 aa27.26■■□□□ 1.95
Gm28050-201ENSMUST00000124394 Lamc3Q9R0B6 1581 aa27.24■■□□□ 1.95
Gm28050-201ENSMUST00000124394 PtprkP35822 1457 aa27.2■■□□□ 1.95
Gm28050-201ENSMUST00000124394 Esf1Q3V1V3 845 aaKnown RBP27.2■■□□□ 1.94
Gm28050-201ENSMUST00000124394 Cep170Q6A065 1588 aa27.2■■□□□ 1.94
Gm28050-201ENSMUST00000124394 Gm156Q58A37 223 aa27.19■■□□□ 1.94
Gm28050-201ENSMUST00000124394 Crocc2F6XLV1 1638 aa27.19■■□□□ 1.94
Gm28050-201ENSMUST00000124394 Brd4Q9ESU6 1400 aaKnown RBP27.12■■□□□ 1.93
Gm28050-201ENSMUST00000124394 Ift140E9PY46 1464 aa27.1■■□□□ 1.93
Gm28050-201ENSMUST00000124394 Il27Q8K3I6 234 aa27.07■■□□□ 1.92
Gm28050-201ENSMUST00000124394 Gapvd1Q6PAR5 1458 aa27.04■■□□□ 1.92
Gm28050-201ENSMUST00000124394 Pprc1Q6NZN1 1644 aa27.01■■□□□ 1.91
Gm28050-201ENSMUST00000124394 LrpprcQ6PB66 1392 aaKnown RBP26.94■■□□□ 1.9
Gm28050-201ENSMUST00000124394 Cypt1Q8CH20 168 aa26.86■■□□□ 1.89
Gm28050-201ENSMUST00000124394 Setd1bQ8CFT2 1985 aa26.85■■□□□ 1.89
Gm28050-201ENSMUST00000124394 Ccdc18Q640L5 1455 aa26.82■■□□□ 1.88
Gm28050-201ENSMUST00000124394 Disp1Q3TDN0 1521 aa26.75■■□□□ 1.87
Gm28050-201ENSMUST00000124394 Rapgef2Q8CHG7 1496 aa26.69■■□□□ 1.86
Gm28050-201ENSMUST00000124394 Ppp1r18Q8BQ30 594 aa26.68■■□□□ 1.86
Gm28050-201ENSMUST00000124394 PogzQ8BZH4 1409 aaKnown RBP26.66■■□□□ 1.86
Gm28050-201ENSMUST00000124394 Ccdc136Q3TVA9 1136 aa26.66■■□□□ 1.86
Gm28050-201ENSMUST00000124394 Camsap1A2AHC3 1581 aa26.63■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Fgd6Q69ZL1 1399 aa26.63■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Cc2d2bA0A286YDU8 1405 aa26.63■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Nup160Q9Z0W3 1402 aaKnown RBP26.61■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Ythdc2B2RR83 1445 aaKnown RBP26.6■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Golga3P55937 1487 aa26.58■■□□□ 1.85
Gm28050-201ENSMUST00000124394 Abcc1O35379 1528 aa26.55■■□□□ 1.84
Gm28050-201ENSMUST00000124394 Setbp1Q9Z180 1582 aa26.55■■□□□ 1.84
Gm28050-201ENSMUST00000124394 AknaQ80VW7 1404 aa26.55■■□□□ 1.84
Gm28050-201ENSMUST00000124394 Pbrm1Q8BSQ9 1634 aaKnown RBP26.54■■□□□ 1.84
Gm28050-201ENSMUST00000124394 Duox2A2AQ99 1517 aa26.54■■□□□ 1.84
Gm28050-201ENSMUST00000124394 Alpk3Q924C5 1678 aa26.53■■□□□ 1.84
Gm28050-201ENSMUST00000124394 TnnQ80Z71 1560 aa26.49■■□□□ 1.83
Gm28050-201ENSMUST00000124394 Ak9G3UYQ4 1894 aa26.49■■□□□ 1.83
Gm28050-201ENSMUST00000124394 Chd1P40201 1711 aa26.48■■□□□ 1.83
Gm28050-201ENSMUST00000124394 Top2aQ01320 1528 aaKnown RBP26.46■■□□□ 1.83
Gm28050-201ENSMUST00000124394 Ccdc88bQ4QRL3 1481 aa26.44■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms