RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W ATO2P32907 282 aa9.81□□□□□ -0.84
SFP1YLR403W YBR242WP38331 238 aa9.81□□□□□ -0.84
SFP1YLR403W NPA3P47122 385 aa9.81□□□□□ -0.84
SFP1YLR403W HCA4P20448 770 aaKnown RBP9.8□□□□□ -0.84
SFP1YLR403W BMH1P29311 267 aaKnown RBP9.8□□□□□ -0.84
SFP1YLR403W TFC3P34111 1160 aa9.8□□□□□ -0.84
SFP1YLR403W MRP8P35719 219 aa9.8□□□□□ -0.84
SFP1YLR403W YKL222CP35995 705 aa9.8□□□□□ -0.84
SFP1YLR403W SPT8P38915 602 aa9.8□□□□□ -0.84
SFP1YLR403W PXA1P41909 870 aa9.8□□□□□ -0.84
SFP1YLR403W IES1P43579 692 aa9.8□□□□□ -0.84
SFP1YLR403W SNX4P47057 423 aa9.8□□□□□ -0.84
SFP1YLR403W ULP1Q02724 621 aa9.8□□□□□ -0.84
SFP1YLR403W DML1Q03652 475 aa9.8□□□□□ -0.84
SFP1YLR403W COG4Q06096 861 aa9.8□□□□□ -0.84
SFP1YLR403W OMS1Q06668 471 aa9.8□□□□□ -0.84
SFP1YLR403W NOT5Q12514 560 aaPredicted RBP9.8□□□□□ -0.84
SFP1YLR403W GCD2P12754 651 aaPredicted RBP9.79□□□□□ -0.84
SFP1YLR403W APN1P22936 367 aa9.79□□□□□ -0.84
SFP1YLR403W YHR020WP38708 688 aaKnown RBP9.79□□□□□ -0.84
SFP1YLR403W YHB1P39676 399 aaKnown RBP9.79□□□□□ -0.84
SFP1YLR403W VPS53P47061 822 aa9.79□□□□□ -0.84
SFP1YLR403W SYF1Q04048 859 aaPredicted RBP9.79□□□□□ -0.84
SFP1YLR403W VTI1Q04338 217 aa9.79□□□□□ -0.84
SFP1YLR403W ATG9Q12142 997 aa9.79□□□□□ -0.84
SFP1YLR403W RSR1P13856 272 aa9.79□□□□□ -0.84
SFP1YLR403W NPL6P32832 435 aa9.79□□□□□ -0.84
SFP1YLR403W SET1P38827 1080 aaKnown RBP9.79□□□□□ -0.84
SFP1YLR403W YEL023CP39992 682 aa9.79□□□□□ -0.84
SFP1YLR403W PHB1P40961 287 aa9.79□□□□□ -0.84
SFP1YLR403W ILM1P47155 203 aa9.79□□□□□ -0.84
SFP1YLR403W SSN8P47821 323 aa9.79□□□□□ -0.84
SFP1YLR403W DCS1Q06151 350 aa9.79□□□□□ -0.84
SFP1YLR403W MCP2Q06567 569 aa9.79□□□□□ -0.84
SFP1YLR403W APC11Q12157 165 aa9.79□□□□□ -0.84
SFP1YLR403W SWR1Q05471 1514 aa9.79□□□□□ -0.84
SFP1YLR403W TEF1P02994 458 aaKnown RBP9.78□□□□□ -0.84
SFP1YLR403W PMR1P13586 950 aa9.78□□□□□ -0.84
SFP1YLR403W KGD2P19262 463 aaPredicted RBP9.78□□□□□ -0.84
SFP1YLR403W DAL7P21826 554 aa9.78□□□□□ -0.84
SFP1YLR403W STE13P33894 931 aa9.78□□□□□ -0.84
SFP1YLR403W DID4P36108 232 aa9.78□□□□□ -0.84
SFP1YLR403W RIC1P40395 1056 aa9.78□□□□□ -0.84
SFP1YLR403W ESL1P40456 1118 aa9.78□□□□□ -0.84
SFP1YLR403W YOL036WQ08206 761 aa9.78□□□□□ -0.84
SFP1YLR403W TAF3Q12297 353 aa9.78□□□□□ -0.84
SFP1YLR403W HIR3P47171 1648 aa9.78□□□□□ -0.84
SFP1YLR403W TPM1P17536 199 aaKnown RBP9.78□□□□□ -0.84
SFP1YLR403W VPH2P32341 215 aa9.78□□□□□ -0.84
SFP1YLR403W RPC34P32910 317 aa9.78□□□□□ -0.84
SFP1YLR403W YKR018CP36114 725 aa9.78□□□□□ -0.84
SFP1YLR403W PIH1P38768 344 aa9.78□□□□□ -0.84
SFP1YLR403W MDM1Q01846 1127 aa9.78□□□□□ -0.84
SFP1YLR403W NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.78□□□□□ -0.84not detected
SFP1YLR403W YPL277CQ08989 487 aa9.78□□□□□ -0.84
SFP1YLR403W GPR1Q12361 961 aa9.78□□□□□ -0.84
SFP1YLR403W TY2B-LR1P0C2J3 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-FP0CX63 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-GR2P0CX64 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-CP25384 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-DR2Q03494 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY1B-DR1Q03855 1755 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-DR3Q07791 1770 aaKnown RBP9.77□□□□□ -0.85
SFP1YLR403W TY2B-OR1Q12113 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-DR1Q12472 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-BQ12491 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY2B-OR2Q12501 1770 aa9.77□□□□□ -0.85
SFP1YLR403W TY1B-DR3Q99231 1755 aa9.77□□□□□ -0.85
SFP1YLR403W SES1P07284 462 aaKnown RBP9.77□□□□□ -0.85
SFP1YLR403W SIT4P20604 311 aa9.77□□□□□ -0.85
SFP1YLR403W TMA64Q04600 565 aaKnown RBP9.77□□□□□ -0.85
SFP1YLR403W YLH47Q06493 454 aa9.77□□□□□ -0.85
SFP1YLR403W RTT10Q08924 1013 aa9.77□□□□□ -0.85
SFP1YLR403W TYR1P20049 452 aa9.76□□□□□ -0.85
SFP1YLR403W TFC4P33339 1025 aa9.76□□□□□ -0.85
SFP1YLR403W TAF5P38129 798 aa9.76□□□□□ -0.85
SFP1YLR403W YSW1P38280 609 aa9.76□□□□□ -0.85
SFP1YLR403W AMN1P38285 549 aaPredicted RBP9.76□□□□□ -0.85
SFP1YLR403W RTT105P40063 208 aa9.76□□□□□ -0.85
SFP1YLR403W FMS1P50264 508 aa9.76□□□□□ -0.85
SFP1YLR403W CEG1Q01159 459 aaPredicted RBP9.76□□□□□ -0.85
SFP1YLR403W OSH2Q12451 1283 aa9.76□□□□□ -0.85
SFP1YLR403W PKC1P24583 1151 aa9.76□□□□□ -0.85
SFP1YLR403W KCC4P25389 1037 aa9.76□□□□□ -0.85
SFP1YLR403W SEC21P32074 935 aaKnown RBP9.76□□□□□ -0.85
SFP1YLR403W PDB1P32473 366 aaKnown RBP9.76□□□□□ -0.85
SFP1YLR403W UBC6P33296 250 aaPredicted RBP9.76□□□□□ -0.85
SFP1YLR403W MIA40P36046 403 aa9.76□□□□□ -0.85
SFP1YLR403W UIP5P36137 443 aa9.76□□□□□ -0.85
SFP1YLR403W OTU2P38747 307 aaKnown RBP9.76□□□□□ -0.85
SFP1YLR403W IRR1P40541 1150 aa9.76□□□□□ -0.85
SFP1YLR403W MET12P46151 657 aa9.76□□□□□ -0.85
SFP1YLR403W DAS1P47005 663 aa9.75□□□□□ -0.85
SFP1YLR403W RAT1Q02792 1006 aaKnown RBP9.75□□□□□ -0.85
SFP1YLR403W SFH1Q06168 426 aa9.75□□□□□ -0.85
SFP1YLR403W YPQ2Q06328 317 aa9.75□□□□□ -0.85
SFP1YLR403W ACF2Q12168 779 aa9.75□□□□□ -0.85
SFP1YLR403W YRM1Q12340 786 aa9.75□□□□□ -0.85
SFP1YLR403W KEX1P09620 729 aa9.75□□□□□ -0.85
SFP1YLR403W PRE10P21242 288 aaKnown RBP RIP-Chip data9.75□□□□□ -0.85not detected
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms