RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W RPL33BP41056 107 aaKnown RBP5.73□□□□□ -1.49
SFP1YLR403W YOR394C-AQ8TGJ0 55 aa5.72□□□□□ -1.49
SFP1YLR403W IRA2P19158 3079 aa5.71□□□□□ -1.49
SFP1YLR403W RPL33AP05744 107 aaKnown RBP5.71□□□□□ -1.5
SFP1YLR403W HFA1P32874 2273 aa5.68□□□□□ -1.5
SFP1YLR403W YGR240C-AQ3E786 66 aa5.67□□□□□ -1.5
SFP1YLR403W YGR146C-AQ8TGT9 53 aa5.67□□□□□ -1.5
SFP1YLR403W GIS2P53849 153 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
SFP1YLR403W TAR1Q8TGM6 124 aa5.66□□□□□ -1.5
SFP1YLR403W YMR230W-AQ3E7B5 62 aa5.65□□□□□ -1.51
SFP1YLR403W YAL067W-AQ8TGK6 75 aa5.63□□□□□ -1.51
SFP1YLR403W RDS3Q06835 107 aaPredicted RBP5.63□□□□□ -1.51
SFP1YLR403W YCR108CQ3E819 63 aa5.61□□□□□ -1.51
SFP1YLR403W COX7P10174 60 aa5.59□□□□□ -1.51
SFP1YLR403W RPL37BP51402 88 aaKnown RBP5.57□□□□□ -1.52
SFP1YLR403W YBL044WP38194 122 aa5.52□□□□□ -1.53
SFP1YLR403W VPS13Q07878 3144 aa5.5□□□□□ -1.53
SFP1YLR403W LCL1Q02786 101 aa5.48□□□□□ -1.53
SFP1YLR403W TOM1Q03280 3268 aa5.48□□□□□ -1.53
SFP1YLR403W YJL144WP47009 104 aa5.47□□□□□ -1.53
SFP1YLR403W OLI1P61829 76 aa5.47□□□□□ -1.53
SFP1YLR403W YFL067WP43537 175 aa5.43□□□□□ -1.54
SFP1YLR403W YOR316C-AQ3E806 69 aa5.42□□□□□ -1.54
SFP1YLR403W YHR073W-AP0C5N7 58 aa5.36□□□□□ -1.55
SFP1YLR403W YBR016WP38216 128 aa5.36□□□□□ -1.55
SFP1YLR403W YLL066W-BQ8TGJ7 56 aa5.31□□□□□ -1.56
SFP1YLR403W GCN1P33892 2672 aaKnown RBP5.22□□□□□ -1.57
SFP1YLR403W PRP8P33334 2413 aaKnown RBP5.21□□□□□ -1.58
SFP1YLR403W CSF1Q12150 2958 aa5.19□□□□□ -1.58
SFP1YLR403W YHR212W-AP0CX91 67 aa5.17□□□□□ -1.58
SFP1YLR403W YJL009WP47078 108 aa5.17□□□□□ -1.58
SFP1YLR403W MEC1P38111 2368 aa5.17□□□□□ -1.58
SFP1YLR403W TAO3P40468 2376 aa5.15□□□□□ -1.59
SFP1YLR403W YBR072C-AQ3E794 53 aa5.08□□□□□ -1.6
SFP1YLR403W TRA1P38811 3744 aa5.07□□□□□ -1.6
SFP1YLR403W HHY1P39982 102 aa5.04□□□□□ -1.6
SFP1YLR403W IRA1P18963 3092 aa5.04□□□□□ -1.6
SFP1YLR403W RPL37AP49166 88 aaKnown RBP5.01□□□□□ -1.61
SFP1YLR403W YDR034C-AP0C289 58 aa4.99□□□□□ -1.61
SFP1YLR403W UTP20P35194 2493 aaKnown RBP4.95□□□□□ -1.62
SFP1YLR403W YOR072W-BQ3E832 53 aa4.87□□□□□ -1.63
SFP1YLR403W YGL260WP53056 76 aa4.84□□□□□ -1.63
SFP1YLR403W Q0297Q9ZZV8 51 aa4.79□□□□□ -1.64
SFP1YLR403W FMP27Q06179 2628 aa4.65□□□□□ -1.67
SFP1YLR403W YPR117WQ06116 2489 aa4.62□□□□□ -1.67
SFP1YLR403W YOL164W-AQ3E7A5 60 aa4.57□□□□□ -1.68
SFP1YLR403W YDR034W-BQ6Q5X2 51 aa4.57□□□□□ -1.68
SFP1YLR403W YHR086W-AQ3E746 53 aa4.49□□□□□ -1.69
SFP1YLR403W YBR056W-AI2HB52 66 aa4.47□□□□□ -1.69
SFP1YLR403W TOR2P32600 2474 aaKnown RBP4.29□□□□□ -1.72
SFP1YLR403W TEL1P38110 2787 aa4.26□□□□□ -1.73
SFP1YLR403W YML054C-AQ3E809 52 aa4.26□□□□□ -1.73
SFP1YLR403W NUM1Q00402 2748 aa4.25□□□□□ -1.73
SFP1YLR403W TOR1P35169 2470 aa4.19□□□□□ -1.74
SFP1YLR403W DYN1P36022 4092 aa4.13□□□□□ -1.75
SFP1YLR403W YLR157W-EP0CF00 54 aa4.02□□□□□ -1.77
SFP1YLR403W Q0017Q9ZZX8 53 aa4.01□□□□□ -1.77
SFP1YLR403W YHR050W-AQ05451 56 aa3.73□□□□□ -1.81
SFP1YLR403W RPS29AP41057 56 aaKnown RBP3.57□□□□□ -1.84
SFP1YLR403W RPS29BP41058 56 aaKnown RBP3.34□□□□□ -1.88
SFP1YLR403W MDN1Q12019 4910 aaKnown RBP3.04□□□□□ -1.92
SFP1YLR403W CUP1-1P0CX80 61 aa3□□□□□ -1.93
SFP1YLR403W CUP1-2P0CX81 61 aa3□□□□□ -1.93
Retrieved 63 of 5,963 RNA–protein pairs in 5.3 ms