Protein–RNA interactions for Protein: P38331

YBR242W, HD domain-containing protein YBR242W, yeastyeast

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YBR242WP38331 NSR1YGR159C 1245 nt17.51■□□□□ 0.39
YBR242WP38331 YML009W-BYML009W-B 477 nt17.04■□□□□ 0.32
YBR242WP38331 NOP1YDL014W 984 nt16.31■□□□□ 0.2
YBR242WP38331 MDJ1YFL016C 1536 nt16.17■□□□□ 0.18
YBR242WP38331 SSA3YBL075C 1950 nt15.02□□□□□ -0.01
YBR242WP38331 YJL027CYJL027C 417 nt14.87□□□□□ -0.03
YBR242WP38331 YKL036CYKL036C 393 nt14.41□□□□□ -0.1
YBR242WP38331 SRX1YKL086W 384 nt14.23□□□□□ -0.13
YBR242WP38331 Q0297Q0297 156 nt14.05□□□□□ -0.16
YBR242WP38331 DBP2YNL112W 1641 nt14.02□□□□□ -0.16
YBR242WP38331 YBR190WYBR190W 312 nt13.97□□□□□ -0.17
YBR242WP38331 RTC3YHR087W 336 nt13.62□□□□□ -0.23
YBR242WP38331 YCR051WYCR051W 669 nt13.44□□□□□ -0.26
YBR242WP38331 TRN1tP(UGG)A 72 nt13.27□□□□□ -0.29
YBR242WP38331 SUF9tP(UGG)F 72 nt13.27□□□□□ -0.29
YBR242WP38331 SUF8tP(UGG)H 72 nt13.27□□□□□ -0.29
YBR242WP38331 tP(UGG)LtP(UGG)L 72 nt13.27□□□□□ -0.29
YBR242WP38331 SUF7tP(UGG)M 72 nt13.27□□□□□ -0.29
YBR242WP38331 tP(UGG)N1tP(UGG)N1 72 nt13.27□□□□□ -0.29
YBR242WP38331 tP(UGG)N2tP(UGG)N2 72 nt13.27□□□□□ -0.29
YBR242WP38331 tP(UGG)O1tP(UGG)O1 72 nt13.27□□□□□ -0.29
YBR242WP38331 SUF11tP(UGG)O2 72 nt13.27□□□□□ -0.29
YBR242WP38331 PUT4YOR348C 1884 nt13.19□□□□□ -0.3
YBR242WP38331 CCC1YLR220W 969 nt13.1□□□□□ -0.31
YBR242WP38331 RVS167YDR388W 1449 nt13.07□□□□□ -0.32
YBR242WP38331 SCJ1YMR214W 1134 nt12.85□□□□□ -0.35
YBR242WP38331 SSA4YER103W 1929 nt12.82□□□□□ -0.36
YBR242WP38331 SCS3YGL126W 1143 nt12.76□□□□□ -0.37
YBR242WP38331 ARE1YCR048W 1833 nt12.74□□□□□ -0.37
YBR242WP38331 PAC11YDR488C 1602 nt12.71□□□□□ -0.37
YBR242WP38331 POA1YBR022W 534 nt12.71□□□□□ -0.37
YBR242WP38331 SPT5YML010W 3192 nt12.64□□□□□ -0.39
YBR242WP38331 RPP1BYDL130W 321 nt12.6□□□□□ -0.39
YBR242WP38331 YHR049C-AYHR049C-A 297 nt12.6□□□□□ -0.39
YBR242WP38331 BSC6YOL137W 1494 nt12.58□□□□□ -0.4
YBR242WP38331 SAH1YER043C 1350 nt12.55□□□□□ -0.4
YBR242WP38331 NVJ2YPR091C 2313 nt12.53□□□□□ -0.4
YBR242WP38331 URN1YPR152C 1398 nt12.5□□□□□ -0.41
YBR242WP38331 YOL085CYOL085C 342 nt12.49□□□□□ -0.41
YBR242WP38331 OPI9YLR338W 858 nt12.47□□□□□ -0.41
YBR242WP38331 BDF1YLR399C 2061 nt12.47□□□□□ -0.41
YBR242WP38331 SHR5YOL110W 714 nt12.45□□□□□ -0.42
YBR242WP38331 PKP1YIL042C 1185 nt12.37□□□□□ -0.43
YBR242WP38331 tP(UGG)O3tP(UGG)O3 72 nt12.32□□□□□ -0.44
YBR242WP38331 DEP1YAL013W 1218 nt12.29□□□□□ -0.44
YBR242WP38331 TAT1YBR069C 1860 nt12.27□□□□□ -0.45
YBR242WP38331 BUD23YCR047C 828 nt12.24□□□□□ -0.45
YBR242WP38331 RPN10YHR200W 807 nt12.19□□□□□ -0.46
YBR242WP38331 FPS1YLL043W 2010 nt12.17□□□□□ -0.46
YBR242WP38331 PET122YER153C 765 nt12.11□□□□□ -0.47
YBR242WP38331 PUN1YLR414C 792 nt12.11□□□□□ -0.47
YBR242WP38331 PTC2YER089C 1395 nt12.05□□□□□ -0.48
YBR242WP38331 YNL208WYNL208W 600 nt12.05□□□□□ -0.48
YBR242WP38331 NAB2YGL122C 1578 nt12□□□□□ -0.49
YBR242WP38331 YDJ1YNL064C 1230 nt11.94□□□□□ -0.5
YBR242WP38331 YJR018WYJR018W 363 nt11.89□□□□□ -0.51
YBR242WP38331 MEP2YNL142W 1500 nt11.88□□□□□ -0.51
YBR242WP38331 SCR1SCR1 522 nt11.81□□□□□ -0.52
YBR242WP38331 FIS1YIL065C 468 nt11.77□□□□□ -0.53
YBR242WP38331 GAR1YHR089C 618 nt11.76□□□□□ -0.53
YBR242WP38331 DAL1YIR027C 1383 nt11.72□□□□□ -0.53
YBR242WP38331 RRN5YLR141W 1092 nt11.68□□□□□ -0.54
YBR242WP38331 DCW1YKL046C 1350 nt11.67□□□□□ -0.54
YBR242WP38331 FPR4YLR449W 1179 nt11.66□□□□□ -0.54
YBR242WP38331 SSA1YAL005C 1929 nt11.65□□□□□ -0.54
YBR242WP38331 YPS1YLR120C 1710 nt11.62□□□□□ -0.55
YBR242WP38331 PHO4YFR034C 939 nt11.61□□□□□ -0.55
YBR242WP38331 UME6YDR207C 2511 nt11.57□□□□□ -0.56
YBR242WP38331 INM2YDR287W 879 nt11.56□□□□□ -0.56
YBR242WP38331 YJR120WYJR120W 351 nt11.56□□□□□ -0.56
YBR242WP38331 YHR165W-AYHR165W-A 312 nt11.54□□□□□ -0.56
YBR242WP38331 YBR220CYBR220C 1683 nt11.51□□□□□ -0.57
YBR242WP38331 EMI2YDR516C 1503 nt11.5□□□□□ -0.57
YBR242WP38331 YMR090WYMR090W 684 nt11.5□□□□□ -0.57
YBR242WP38331 RPP2BYDR382W 333 nt11.48□□□□□ -0.57
YBR242WP38331 YDR095CYDR095C 411 nt11.45□□□□□ -0.58
YBR242WP38331 YER088W-BYER088W-B 147 nt11.45□□□□□ -0.58
YBR242WP38331 TIR1YER011W 765 nt11.4□□□□□ -0.58
YBR242WP38331 PCH2YBR186W 1695 nt11.4□□□□□ -0.59
YBR242WP38331 GUT2YIL155C 1950 nt11.38□□□□□ -0.59
YBR242WP38331 YDL221WYDL221W 552 nt11.37□□□□□ -0.59
YBR242WP38331 SDH1YKL148C 1923 nt11.35□□□□□ -0.59
YBR242WP38331 YBL100CYBL100C 315 nt11.34□□□□□ -0.59
YBR242WP38331 CAC2YML102W 1407 nt11.26□□□□□ -0.61
YBR242WP38331 RSB1YOR049C 1065 nt11.26□□□□□ -0.61
YBR242WP38331 SEC11YIR022W 504 nt11.25□□□□□ -0.61
YBR242WP38331 PTP1YDL230W 1008 nt11.24□□□□□ -0.61
YBR242WP38331 BOR1YNL275W 1731 nt11.23□□□□□ -0.61
YBR242WP38331 ATS1YAL020C 1002 nt11.22□□□□□ -0.61
YBR242WP38331 RPP2AYOL039W 321 nt11.22□□□□□ -0.61
YBR242WP38331 SCC4YER147C 1875 nt11.19□□□□□ -0.62
YBR242WP38331 FUN26YAL022C 1554 nt11.18□□□□□ -0.62
YBR242WP38331 ALF1YNL148C 765 nt11.17□□□□□ -0.62
YBR242WP38331 PIB2YGL023C 1908 nt11.15□□□□□ -0.62
YBR242WP38331 BDH2YAL061W 1254 nt11.13□□□□□ -0.63
YBR242WP38331 IRC15YPL017C 1500 nt11.1□□□□□ -0.63
YBR242WP38331 MCH5YOR306C 1566 nt11.07□□□□□ -0.64
YBR242WP38331 SRB2YHR041C 633 nt11.06□□□□□ -0.64
YBR242WP38331 GIS3YLR094C 1509 nt11.05□□□□□ -0.64
YBR242WP38331 TRM9YML014W 840 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 7.2 ms