RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W RGP1P16664 663 aa6.49□□□□□ -1.37
VMS1YDR049W TBS1P38114 1094 aa6.49□□□□□ -1.37
VMS1YDR049W PEX29Q03370 554 aa6.49□□□□□ -1.37
VMS1YDR049W SAS4Q04003 481 aa6.49□□□□□ -1.37
VMS1YDR049W YSH1Q06224 779 aaPredicted RBP6.49□□□□□ -1.37
VMS1YDR049W YPR172WQ06608 200 aa6.49□□□□□ -1.37
VMS1YDR049W SAC3P46674 1301 aa6.48□□□□□ -1.37
VMS1YDR049W CHD1P32657 1468 aa6.48□□□□□ -1.37
VMS1YDR049W PDI1P17967 522 aaKnown RBP6.48□□□□□ -1.37
VMS1YDR049W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37not detected
VMS1YDR049W CDC55Q00362 526 aa6.48□□□□□ -1.37
VMS1YDR049W NSE5Q03718 556 aa6.48□□□□□ -1.37
VMS1YDR049W NIC96P34077 839 aa6.47□□□□□ -1.37
VMS1YDR049W RRF1P38771 230 aa6.47□□□□□ -1.37
VMS1YDR049W POP2P39008 433 aa6.47□□□□□ -1.37
VMS1YDR049W VPS8P39702 1274 aa6.47□□□□□ -1.37
VMS1YDR049W GEM1P39722 662 aa6.47□□□□□ -1.37
VMS1YDR049W SEC9P40357 651 aa6.47□□□□□ -1.37
VMS1YDR049W MID1P41821 548 aa6.47□□□□□ -1.37
VMS1YDR049W PAP2P53632 584 aaKnown RBP6.47□□□□□ -1.37
VMS1YDR049W YNR063WP53749 607 aa6.47□□□□□ -1.37
VMS1YDR049W HEH2Q03281 663 aa6.47□□□□□ -1.37
VMS1YDR049W SPO71Q03868 1245 aa6.47□□□□□ -1.37
VMS1YDR049W CSC1Q06538 782 aa6.47□□□□□ -1.37
VMS1YDR049W MCM1P11746 286 aa6.47□□□□□ -1.37
VMS1YDR049W PRE9P23638 258 aaKnown RBP6.47□□□□□ -1.37
VMS1YDR049W SPT23P35210 1082 aa6.47□□□□□ -1.37
VMS1YDR049W SOH1P38633 127 aa6.47□□□□□ -1.37
VMS1YDR049W YHL041WP38730 149 aa6.47□□□□□ -1.37
VMS1YDR049W SOL3P38858 249 aa6.47□□□□□ -1.37
VMS1YDR049W MRPS18P42847 217 aa6.47□□□□□ -1.37
VMS1YDR049W YJR115WP47152 169 aa6.47□□□□□ -1.37
VMS1YDR049W STR2P47164 639 aa6.47□□□□□ -1.37
VMS1YDR049W KXD1P53158 218 aa6.47□□□□□ -1.37
VMS1YDR049W MLC2Q06580 163 aa6.47□□□□□ -1.37
VMS1YDR049W OPY2Q06810 360 aa6.47□□□□□ -1.37
VMS1YDR049W RED1P14291 827 aa6.46□□□□□ -1.38
VMS1YDR049W NPR3P38742 1146 aa6.46□□□□□ -1.38
VMS1YDR049W CIC1P38779 376 aaKnown RBP6.46□□□□□ -1.38
VMS1YDR049W GPD2P41911 440 aaKnown RBP6.46□□□□□ -1.38
VMS1YDR049W RTA1P53047 317 aa6.46□□□□□ -1.38
VMS1YDR049W YNL011CP53980 444 aa6.46□□□□□ -1.38
VMS1YDR049W FRA1Q07825 749 aa6.46□□□□□ -1.38
VMS1YDR049W ALR1Q08269 859 aa6.46□□□□□ -1.38
VMS1YDR049W BDS1Q08347 646 aa6.46□□□□□ -1.38
VMS1YDR049W APC11Q12157 165 aa6.46□□□□□ -1.38
VMS1YDR049W MCD1Q12158 566 aa6.46□□□□□ -1.38
VMS1YDR049W CMP2P14747 604 aa6.45□□□□□ -1.38
VMS1YDR049W IDI1P15496 288 aa6.45□□□□□ -1.38
VMS1YDR049W RPB10P22139 70 aa6.45□□□□□ -1.38
VMS1YDR049W YKL133CP36066 463 aa6.45□□□□□ -1.38
VMS1YDR049W ESL2P36168 1195 aa6.45□□□□□ -1.38
VMS1YDR049W BCD1P38772 366 aa6.45□□□□□ -1.38
VMS1YDR049W HUL4P40985 892 aa6.45□□□□□ -1.38
VMS1YDR049W RSC8P43609 557 aaKnown RBP6.45□□□□□ -1.38
VMS1YDR049W CNN1P43618 361 aa6.45□□□□□ -1.38
VMS1YDR049W HSV2P50079 448 aaPredicted RBP6.45□□□□□ -1.38
VMS1YDR049W PBP1P53297 722 aaKnown RBP6.45□□□□□ -1.38
VMS1YDR049W SDA1P53313 767 aaKnown RBP6.45□□□□□ -1.38
VMS1YDR049W TAF8Q03750 510 aa6.45□□□□□ -1.38
VMS1YDR049W FMP25Q08023 583 aa6.45□□□□□ -1.38
VMS1YDR049W MDM38Q08179 573 aa6.45□□□□□ -1.38
VMS1YDR049W LAP2Q10740 671 aa6.45□□□□□ -1.38
VMS1YDR049W BAS1P22035 811 aa6.45□□□□□ -1.38
VMS1YDR049W SLI15P38283 698 aa6.45□□□□□ -1.38
VMS1YDR049W APL6P46682 809 aa6.45□□□□□ -1.38
VMS1YDR049W MAL11P53048 616 aa6.45□□□□□ -1.38
VMS1YDR049W ERP6P53198 216 aa6.45□□□□□ -1.38
VMS1YDR049W VPS30Q02948 557 aa6.45□□□□□ -1.38
VMS1YDR049W STE20Q03497 939 aaKnown RBP6.45□□□□□ -1.38
VMS1YDR049W SGD1Q06132 899 aa6.45□□□□□ -1.38
VMS1YDR049W AI4P03878 556 aa6.44□□□□□ -1.38
VMS1YDR049W SPO16P17122 198 aa6.44□□□□□ -1.38
VMS1YDR049W UGA3P26370 528 aa6.44□□□□□ -1.38
VMS1YDR049W TYS1P36421 394 aaKnown RBP6.44□□□□□ -1.38
VMS1YDR049W KTR4P38131 464 aa6.44□□□□□ -1.38
VMS1YDR049W GPP2P40106 250 aaKnown RBP6.44□□□□□ -1.38
VMS1YDR049W HXT8P40886 569 aa6.44□□□□□ -1.38
VMS1YDR049W IML2P47031 731 aa6.44□□□□□ -1.38
VMS1YDR049W HFD1Q04458 532 aa6.44□□□□□ -1.38
VMS1YDR049W EAF1Q06337 982 aa6.44□□□□□ -1.38
VMS1YDR049W NOC3Q07896 663 aaPredicted RBP6.44□□□□□ -1.38
VMS1YDR049W RSC58Q07979 502 aa6.44□□□□□ -1.38
VMS1YDR049W SCM3Q12334 223 aa6.44□□□□□ -1.38
VMS1YDR049W IME2P32581 645 aa6.43□□□□□ -1.38
VMS1YDR049W BAP2P38084 609 aa6.43□□□□□ -1.38
VMS1YDR049W SAE2P46946 345 aa6.43□□□□□ -1.38
VMS1YDR049W SNP1Q00916 300 aaPredicted RBP6.43□□□□□ -1.38
VMS1YDR049W ATG20Q07528 640 aa6.43□□□□□ -1.38
VMS1YDR049W YLR001CQ07895 862 aa6.43□□□□□ -1.38
VMS1YDR049W APN1P22936 367 aa6.43□□□□□ -1.38
VMS1YDR049W UBP1P25037 809 aa6.43□□□□□ -1.38
VMS1YDR049W KCC4P25389 1037 aa6.43□□□□□ -1.38
VMS1YDR049W ARE1P25628 610 aa6.43□□□□□ -1.38
VMS1YDR049W KIP2P28743 706 aa6.43□□□□□ -1.38
VMS1YDR049W DPH2P32461 534 aa6.43□□□□□ -1.38
VMS1YDR049W LRP1P38801 184 aaKnown RBP6.43□□□□□ -1.38
VMS1YDR049W YIL166CP40445 542 aa6.43□□□□□ -1.38
VMS1YDR049W PFD1P46988 109 aa6.43□□□□□ -1.38
VMS1YDR049W CCT8P47079 568 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms