RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W RPL8BP29453 256 aaKnown RBP2.59□□□□□ -1.99
VPS8YAL002W YRO2P38079 344 aa2.59□□□□□ -1.99
VPS8YAL002W MTR4P47047 1073 aaKnown RBP2.59□□□□□ -1.99
VPS8YAL002W AVO1Q08236 1176 aa2.59□□□□□ -1.99
VPS8YAL002W RPA190P10964 1664 aaKnown RBP2.59□□□□□ -2
VPS8YAL002W KAR1P11927 433 aa2.59□□□□□ -2
VPS8YAL002W CDC11P32458 415 aa2.59□□□□□ -2
VPS8YAL002W MRT4P33201 236 aaKnown RBP2.59□□□□□ -2
VPS8YAL002W LSB6P42951 607 aa2.59□□□□□ -2
VPS8YAL002W RAT1Q02792 1006 aaKnown RBP2.59□□□□□ -2
VPS8YAL002W UTP4Q06679 776 aaKnown RBP2.59□□□□□ -2
VPS8YAL002W YPK9Q12697 1472 aa2.58□□□□□ -2
VPS8YAL002W SBP1P10080 294 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W SEA4P38164 1038 aa2.58□□□□□ -2
VPS8YAL002W EEB1Q02891 456 aa2.58□□□□□ -2
VPS8YAL002W YMR265CQ03508 461 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W DUS3Q06053 668 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W HDA2Q06629 674 aa2.58□□□□□ -2
VPS8YAL002W SGS1P35187 1447 aa2.58□□□□□ -2
VPS8YAL002W AMS1P22855 1083 aa2.58□□□□□ -2
VPS8YAL002W FET4P40988 552 aa2.58□□□□□ -2
VPS8YAL002W YNR040WP53736 256 aa2.58□□□□□ -2
VPS8YAL002W REC8Q12188 680 aa2.58□□□□□ -2
VPS8YAL002W TMA17Q12513 150 aa2.58□□□□□ -2
VPS8YAL002W RAS1P01119 309 aa2.58□□□□□ -2
VPS8YAL002W MLS1P30952 554 aa2.58□□□□□ -2
VPS8YAL002W GRX4P32642 244 aa2.58□□□□□ -2
VPS8YAL002W DOM34P33309 386 aa2.58□□□□□ -2
VPS8YAL002W NMD3P38861 518 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W SNF7P39929 240 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W DOT6P40059 670 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W TPM2P40414 161 aa2.58□□□□□ -2
VPS8YAL002W YIL165CP40446 119 aa2.58□□□□□ -2
VPS8YAL002W IRR1P40541 1150 aa2.58□□□□□ -2
VPS8YAL002W BUD6P41697 788 aa2.58□□□□□ -2
VPS8YAL002W RTA1P53047 317 aa2.58□□□□□ -2
VPS8YAL002W ATG13Q06628 738 aa2.58□□□□□ -2
VPS8YAL002W ALG6Q12001 544 aaKnown RBP2.58□□□□□ -2
VPS8YAL002W CDC25P04821 1589 aa2.57□□□□□ -2
VPS8YAL002W RGP1P16664 663 aa2.57□□□□□ -2
VPS8YAL002W SDH2P21801 266 aa2.57□□□□□ -2
VPS8YAL002W GSY1P23337 708 aa2.57□□□□□ -2
VPS8YAL002W VBA3P25594 458 aa2.57□□□□□ -2
VPS8YAL002W SEC6P32844 805 aa2.57□□□□□ -2
VPS8YAL002W PEX6P33760 1030 aa2.57□□□□□ -2
VPS8YAL002W PBY1P38254 753 aa2.57□□□□□ -2
VPS8YAL002W SSN3P39073 555 aa2.57□□□□□ -2
VPS8YAL002W NOP2P40991 618 aaKnown RBP2.57□□□□□ -2
VPS8YAL002W YJR120WP47157 116 aa2.57□□□□□ -2
VPS8YAL002W SOK2P53438 785 aaPredicted RBP2.57□□□□□ -2
VPS8YAL002W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
VPS8YAL002W DUR3P33413 735 aa2.57□□□□□ -2
VPS8YAL002W RER2P35196 286 aa2.57□□□□□ -2
VPS8YAL002W MNN4P36044 1178 aa2.57□□□□□ -2
VPS8YAL002W APM2P38700 605 aa2.57□□□□□ -2
VPS8YAL002W RSC2Q06488 889 aa2.57□□□□□ -2
VPS8YAL002W RPO31P04051 1460 aa2.57□□□□□ -2
VPS8YAL002W SYP1P25623 870 aaKnown RBP2.57□□□□□ -2
VPS8YAL002W DUT1P33317 147 aa2.57□□□□□ -2
VPS8YAL002W SAP190P36123 1033 aa2.57□□□□□ -2
VPS8YAL002W XDJ1P39102 459 aa2.57□□□□□ -2
VPS8YAL002W ITC1P53125 1264 aa2.57□□□□□ -2
VPS8YAL002W SND1Q04007 877 aa2.57□□□□□ -2
VPS8YAL002W YPR196WQ06595 470 aa2.57□□□□□ -2
VPS8YAL002W TY1A-DR3Q12441 440 aa2.57□□□□□ -2
VPS8YAL002W COBP00163 385 aa2.56□□□□□ -2
VPS8YAL002W CDC4P07834 779 aa2.56□□□□□ -2
VPS8YAL002W SBA1P28707 216 aaKnown RBP2.56□□□□□ -2
VPS8YAL002W SPO74P45819 413 aa2.56□□□□□ -2
VPS8YAL002W YJR098CP47139 656 aa2.56□□□□□ -2
VPS8YAL002W PTC5Q12511 572 aa2.56□□□□□ -2
VPS8YAL002W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
VPS8YAL002W TOP3P13099 656 aa2.56□□□□□ -2
VPS8YAL002W NPR1P22211 790 aa2.56□□□□□ -2
VPS8YAL002W AGP1P25376 633 aa2.56□□□□□ -2
VPS8YAL002W MSN5P52918 1224 aa2.56□□□□□ -2
VPS8YAL002W YGL140CP53120 1219 aa2.56□□□□□ -2
VPS8YAL002W MDG1P53885 366 aa2.56□□□□□ -2
VPS8YAL002W SSN2P38931 1420 aa2.56□□□□□ -2
VPS8YAL002W TRM3Q07527 1436 aa2.56□□□□□ -2
VPS8YAL002W UBP12P39538 1254 aa2.56□□□□□ -2
VPS8YAL002W GPB2P39717 880 aa2.56□□□□□ -2
VPS8YAL002W TAN1P53072 289 aaPredicted RBP2.56□□□□□ -2
VPS8YAL002W TIF35Q04067 274 aaKnown RBP2.56□□□□□ -2
VPS8YAL002W YLR346CQ06139 101 aa2.56□□□□□ -2
VPS8YAL002W GIC2Q06648 383 aa2.56□□□□□ -2
VPS8YAL002W MPD2Q99316 277 aa2.56□□□□□ -2
VPS8YAL002W TY1B-HO13535 1793 aa2.55□□□□□ -2
VPS8YAL002W TY1B-DR5P0C2I2 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-DR6P0C2I3 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-LR2P0C2I5 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-LR3P0C2I6 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TY1B-PR1P0C2I9 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TY1B-PR2P0C2J0 1756 aa2.55□□□□□ -2
VPS8YAL002W TY1B-PR3P0C2J1 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TY1B-JR1P47098 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-ML2Q03434 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TY1B-ER1Q03612 1755 aa2.55□□□□□ -2
VPS8YAL002W TY1B-ML1Q04711 1755 aaKnown RBP2.55□□□□□ -2
VPS8YAL002W TY1B-GR2Q12269 1755 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms