RNA–Protein interactions for RNA: YAL002W

VPS8, Transcript of Membrane-binding component of the CORVET complex, yeastyeast

Gene VPS8, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS8YAL002W DRS1P32892 752 aaKnown RBP5.58□□□□□ -1.52
VPS8YAL002W MTC1P47018 478 aaKnown RBP5.02□□□□□ -1.61
VPS8YAL002W BFR2Q06631 534 aaKnown RBP5.01□□□□□ -1.61
VPS8YAL002W TFA1P36100 482 aa4.7□□□□□ -1.66
VPS8YAL002W RQC2Q12532 1038 aaKnown RBP4.56□□□□□ -1.68
VPS8YAL002W DIP2Q12220 943 aaPredicted RBP4.55□□□□□ -1.68
VPS8YAL002W AVT3P36062 692 aa4.4□□□□□ -1.71
VPS8YAL002W RSE1Q04693 1361 aaKnown RBP4.2□□□□□ -1.74
VPS8YAL002W PTP3P40048 928 aa4.2□□□□□ -1.74
VPS8YAL002W DMA1P38823 416 aa4.2□□□□□ -1.74
VPS8YAL002W RPL17AP05740 184 aaKnown RBP4.1□□□□□ -1.75
VPS8YAL002W RPL17BP46990 184 aaKnown RBP4.1□□□□□ -1.75
VPS8YAL002W ISW2Q08773 1120 aa4.08□□□□□ -1.76
VPS8YAL002W REB1P21538 810 aa4.07□□□□□ -1.76
VPS8YAL002W RPG1P38249 964 aaKnown RBP4.04□□□□□ -1.76
VPS8YAL002W FAP1P53971 965 aa4.04□□□□□ -1.76
VPS8YAL002W TAF7Q05021 590 aa4.02□□□□□ -1.77
VPS8YAL002W YAH1Q12184 172 aaKnown RBP4□□□□□ -1.77
VPS8YAL002W SSP1P38871 571 aa3.88□□□□□ -1.79
VPS8YAL002W YIL055CP40523 627 aaKnown RBP3.87□□□□□ -1.79
VPS8YAL002W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
VPS8YAL002W TSR3Q12094 313 aaKnown RBP3.81□□□□□ -1.8
VPS8YAL002W AAD16Q02895 342 aa3.78□□□□□ -1.8
VPS8YAL002W PRI1P10363 409 aa3.77□□□□□ -1.81
VPS8YAL002W LEO1P38439 464 aa3.76□□□□□ -1.81
VPS8YAL002W RIM101P33400 625 aa3.74□□□□□ -1.81
VPS8YAL002W SPT21P35209 758 aa3.72□□□□□ -1.81
VPS8YAL002W PRY3P47033 881 aa3.72□□□□□ -1.81
VPS8YAL002W SPB4P25808 606 aaPredicted RBP3.71□□□□□ -1.82
VPS8YAL002W OXP1P28273 1286 aa3.71□□□□□ -1.82
VPS8YAL002W HOP09932 586 aa3.7□□□□□ -1.82
VPS8YAL002W YLR271WQ06152 274 aa3.69□□□□□ -1.82
VPS8YAL002W DCD1P06773 312 aa3.68□□□□□ -1.82
VPS8YAL002W DMA2P53924 522 aa3.68□□□□□ -1.82
VPS8YAL002W RSM7P47150 247 aa3.66□□□□□ -1.82
VPS8YAL002W MGA2P40578 1113 aa3.66□□□□□ -1.82
VPS8YAL002W CST9Q06032 482 aa3.65□□□□□ -1.83
VPS8YAL002W MRPL32P25348 183 aa3.64□□□□□ -1.83
VPS8YAL002W VPS70P47161 811 aa3.63□□□□□ -1.83
VPS8YAL002W LEU3P08638 886 aa3.61□□□□□ -1.83
VPS8YAL002W BBC1P47068 1157 aa3.59□□□□□ -1.84
VPS8YAL002W AI2P03876 854 aa3.58□□□□□ -1.84
VPS8YAL002W RPN1P38764 993 aaKnown RBP3.57□□□□□ -1.84
VPS8YAL002W YKR023WP36119 530 aaKnown RBP3.56□□□□□ -1.84
VPS8YAL002W MRM1P25270 412 aa3.56□□□□□ -1.84
VPS8YAL002W SET1P38827 1080 aaKnown RBP3.54□□□□□ -1.84
VPS8YAL002W SAS10Q12136 610 aaPredicted RBP3.52□□□□□ -1.85
VPS8YAL002W TFC8Q12308 588 aa3.52□□□□□ -1.85
VPS8YAL002W RCR1P38212 213 aa3.5□□□□□ -1.85
VPS8YAL002W MIF2P35201 549 aa3.5□□□□□ -1.85
VPS8YAL002W RAM2P29703 316 aa3.49□□□□□ -1.85
VPS8YAL002W GLC3P32775 704 aa3.49□□□□□ -1.85
VPS8YAL002W CDC27P38042 758 aa3.48□□□□□ -1.85
VPS8YAL002W CKB1P43639 278 aa3.48□□□□□ -1.85
VPS8YAL002W HGH1P48362 394 aaKnown RBP3.48□□□□□ -1.85
VPS8YAL002W PSD2P53037 1138 aaKnown RBP3.47□□□□□ -1.85
VPS8YAL002W BCH2P36122 765 aa3.47□□□□□ -1.85
VPS8YAL002W SCY1P53009 804 aa3.47□□□□□ -1.85
VPS8YAL002W RLF2Q12495 606 aa3.46□□□□□ -1.86
VPS8YAL002W EPS1P40557 701 aa3.45□□□□□ -1.86
VPS8YAL002W ATF2P53296 535 aa3.45□□□□□ -1.86
VPS8YAL002W KIN1P13185 1064 aa3.45□□□□□ -1.86
VPS8YAL002W PBS2P08018 668 aa3.44□□□□□ -1.86
VPS8YAL002W IES2P40154 320 aa3.44□□□□□ -1.86
VPS8YAL002W YFR006WP43590 535 aa3.43□□□□□ -1.86
VPS8YAL002W RTG3P38165 486 aa3.43□□□□□ -1.86
VPS8YAL002W PIB1Q06651 286 aa3.43□□□□□ -1.86
VPS8YAL002W IFH1P39520 1085 aa3.42□□□□□ -1.86
VPS8YAL002W MAM3Q12296 706 aa3.42□□□□□ -1.86
VPS8YAL002W COQ8P27697 501 aa3.39□□□□□ -1.87
VPS8YAL002W BDF1P35817 686 aa3.39□□□□□ -1.87
VPS8YAL002W RPL34BP40525 121 aaKnown RBP3.39□□□□□ -1.87
VPS8YAL002W ABP1P15891 592 aaKnown RBP3.37□□□□□ -1.87
VPS8YAL002W MAK11P20484 414 aaKnown RBP3.37□□□□□ -1.87
VPS8YAL002W DIT2P21595 489 aa3.36□□□□□ -1.87
VPS8YAL002W KIC1P38692 1080 aa3.36□□□□□ -1.87
VPS8YAL002W REF2P42073 533 aaPredicted RBP3.36□□□□□ -1.87
VPS8YAL002W MON2P48563 1636 aaPredicted RBP3.36□□□□□ -1.87
VPS8YAL002W YJL007CP47080 104 aa3.35□□□□□ -1.87
VPS8YAL002W YNR021WP53723 404 aaKnown RBP3.35□□□□□ -1.87
VPS8YAL002W BRL1P38770 471 aa3.35□□□□□ -1.87
VPS8YAL002W VHR2P40041 505 aa3.35□□□□□ -1.87
VPS8YAL002W GUA1P38625 525 aaKnown RBP3.35□□□□□ -1.87
VPS8YAL002W DBP1P24784 617 aaKnown RBP3.34□□□□□ -1.87
VPS8YAL002W MAP2P38174 421 aaKnown RBP3.34□□□□□ -1.88
VPS8YAL002W DSF2P38213 736 aa3.34□□□□□ -1.88
VPS8YAL002W SLX5P32828 619 aaKnown RBP3.33□□□□□ -1.88
VPS8YAL002W TFB3Q03290 321 aa3.33□□□□□ -1.88
VPS8YAL002W HAA1Q12753 694 aaKnown RBP3.33□□□□□ -1.88
VPS8YAL002W YPR148CQ06523 435 aa3.32□□□□□ -1.88
VPS8YAL002W YOR238WQ08634 303 aa3.31□□□□□ -1.88
VPS8YAL002W ATH1P48016 1211 aa3.3□□□□□ -1.88
VPS8YAL002W EDS1P38073 919 aa3.3□□□□□ -1.88
VPS8YAL002W YMR1P47147 688 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
VPS8YAL002W YMR196WQ04336 1088 aa3.29□□□□□ -1.88
VPS8YAL002W STS1P38637 319 aa3.29□□□□□ -1.88
VPS8YAL002W PKC1P24583 1151 aa3.29□□□□□ -1.88
VPS8YAL002W VPS29P38759 282 aa3.29□□□□□ -1.88
VPS8YAL002W YPR204WQ08995 1032 aa3.29□□□□□ -1.88
VPS8YAL002W RPL34AP87262 121 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms