RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	KAR2	P16474	682 aa	Known RBP	4.22	□□□□□ -1.73
APL4	YPR029C	UGA3	P26370	528 aa		4.22	□□□□□ -1.73
APL4	YPR029C	YGR130C	P53278	816 aa		4.22	□□□□□ -1.73
APL4	YPR029C	TFB2	Q02939	513 aa		4.22	□□□□□ -1.73
APL4	YPR029C	AVO1	Q08236	1176 aa		4.22	□□□□□ -1.73
APL4	YPR029C	LAP2	Q10740	671 aa		4.22	□□□□□ -1.73
APL4	YPR029C	FAP7	Q12055	197 aa	Predicted RBP	4.22	□□□□□ -1.73
APL4	YPR029C	MCM16	Q12262	181 aa		4.22	□□□□□ -1.73
APL4	YPR029C	OSH2	Q12451	1283 aa		4.22	□□□□□ -1.73
APL4	YPR029C	SCJ1	P25303	377 aa		4.21	□□□□□ -1.73
APL4	YPR029C	MCM10	P32354	571 aa		4.21	□□□□□ -1.73
APL4	YPR029C	RPC37	P36121	282 aa		4.21	□□□□□ -1.73
APL4	YPR029C	YIL166C	P40445	542 aa		4.21	□□□□□ -1.73
APL4	YPR029C	CNN1	P43618	361 aa		4.21	□□□□□ -1.73
APL4	YPR029C	SHE10	P53075	577 aa		4.21	□□□□□ -1.73
APL4	YPR029C	YGR125W	P53273	1036 aa		4.21	□□□□□ -1.73
APL4	YPR029C	YNL034W	P53963	612 aa		4.21	□□□□□ -1.73
APL4	YPR029C	YNL018C	P53976	612 aa		4.21	□□□□□ -1.73
APL4	YPR029C	NSE5	Q03718	556 aa		4.21	□□□□□ -1.73
APL4	YPR029C	RNH1	Q04740	348 aa		4.21	□□□□□ -1.73
APL4	YPR029C	OPI10	Q08202	246 aa		4.21	□□□□□ -1.73
APL4	YPR029C	ALR1	Q08269	859 aa		4.21	□□□□□ -1.73
APL4	YPR029C	TRE2	Q08693	809 aa		4.21	□□□□□ -1.73
APL4	YPR029C	GAL1	P04385	528 aa		4.21	□□□□□ -1.74
APL4	YPR029C	PRI2	P20457	528 aa		4.21	□□□□□ -1.74
APL4	YPR029C	VPS35	P34110	944 aa		4.21	□□□□□ -1.74
APL4	YPR029C	EAP1	P36041	632 aa	Known RBP	4.21	□□□□□ -1.74
APL4	YPR029C	ORC6	P38826	435 aa		4.21	□□□□□ -1.74
APL4	YPR029C	VPS8	P39702	1274 aa		4.21	□□□□□ -1.74
APL4	YPR029C	GEM1	P39722	662 aa		4.21	□□□□□ -1.74
APL4	YPR029C	YCK3	P39962	524 aa		4.21	□□□□□ -1.74
APL4	YPR029C	BNA1	P47096	177 aa		4.21	□□□□□ -1.74
APL4	YPR029C	PEX21	P50091	288 aa		4.21	□□□□□ -1.74
APL4	YPR029C	KXD1	P53158	218 aa		4.21	□□□□□ -1.74
APL4	YPR029C	YNL011C	P53980	444 aa		4.21	□□□□□ -1.74
APL4	YPR029C	PTA1	Q01329	785 aa	Predicted RBP	4.21	□□□□□ -1.74
APL4	YPR029C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
APL4	YPR029C	UME1	Q03010	460 aa		4.21	□□□□□ -1.74
APL4	YPR029C	UGO1	Q03327	502 aa		4.21	□□□□□ -1.74
APL4	YPR029C	RAD33	Q04231	177 aa		4.21	□□□□□ -1.74
APL4	YPR029C	SWA2	Q06677	668 aa		4.21	□□□□□ -1.74
APL4	YPR029C	SPO75	Q07798	868 aa		4.21	□□□□□ -1.74
APL4	YPR029C	OXR1	Q08952	273 aa		4.21	□□□□□ -1.74
APL4	YPR029C	RUD3	Q12234	484 aa	Known RBP	4.21	□□□□□ -1.74
APL4	YPR029C	STF1	P01098	86 aa		4.2	□□□□□ -1.74
APL4	YPR029C	NPR1	P22211	790 aa		4.2	□□□□□ -1.74
APL4	YPR029C	NPL4	P33755	580 aa		4.2	□□□□□ -1.74
APL4	YPR029C	ESL2	P36168	1195 aa		4.2	□□□□□ -1.74
APL4	YPR029C	RIX1	P38883	763 aa	Predicted RBP	4.2	□□□□□ -1.74
APL4	YPR029C	GPD2	P41911	440 aa	Known RBP	4.2	□□□□□ -1.74
APL4	YPR029C	CCT8	P47079	568 aa	Known RBP	4.2	□□□□□ -1.74
APL4	YPR029C	SGD1	Q06132	899 aa		4.2	□□□□□ -1.74
APL4	YPR029C	RIX7	Q07844	837 aa	Known RBP	4.2	□□□□□ -1.74
APL4	YPR029C	SSP2	Q08646	371 aa		4.2	□□□□□ -1.74
APL4	YPR029C	LSO1	Q3E827	93 aa		4.2	□□□□□ -1.74
APL4	YPR029C	TUF1	P02992	437 aa	Known RBP	4.2	□□□□□ -1.74
APL4	YPR029C	DCD1	P06773	312 aa		4.2	□□□□□ -1.74
APL4	YPR029C	IDI1	P15496	288 aa		4.2	□□□□□ -1.74
APL4	YPR029C	RGR1	P19263	1082 aa		4.2	□□□□□ -1.74
APL4	YPR029C	JEM1	P40358	645 aa		4.2	□□□□□ -1.74
APL4	YPR029C	EPS1	P40557	701 aa		4.2	□□□□□ -1.74
APL4	YPR029C	HUL4	P40985	892 aa		4.2	□□□□□ -1.74
APL4	YPR029C	SAE2	P46946	345 aa		4.2	□□□□□ -1.74
APL4	YPR029C	IML2	P47031	731 aa		4.2	□□□□□ -1.74
APL4	YPR029C	FAA4	P47912	694 aa	Known RBP	4.2	□□□□□ -1.74
APL4	YPR029C	YML6	P51998	286 aa		4.2	□□□□□ -1.74
APL4	YPR029C	YMR018W	Q04364	514 aa		4.2	□□□□□ -1.74
APL4	YPR029C	GPI13	Q07830	1017 aa		4.2	□□□□□ -1.74
APL4	YPR029C	THI73	Q07904	523 aa		4.2	□□□□□ -1.74
APL4	YPR029C	PCL8	Q08966	492 aa		4.2	□□□□□ -1.74
APL4	YPR029C	YDR056C	Q12025	205 aa		4.2	□□□□□ -1.74
APL4	YPR029C	YRM1	Q12340	786 aa		4.2	□□□□□ -1.74
APL4	YPR029C	SES1	P07284	462 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	GLK1	P17709	500 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	EUG1	P32474	517 aa		4.19	□□□□□ -1.74
APL4	YPR029C	YKL133C	P36066	463 aa		4.19	□□□□□ -1.74
APL4	YPR029C	BCH2	P36122	765 aa		4.19	□□□□□ -1.74
APL4	YPR029C	TIF5	P38431	405 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	ROM1	P53046	1155 aa		4.19	□□□□□ -1.74
APL4	YPR029C	TAN1	P53072	289 aa	Predicted RBP	4.19	□□□□□ -1.74
APL4	YPR029C	ZDS2	P54786	942 aa		4.19	□□□□□ -1.74
APL4	YPR029C	YPR097W	Q06839	1073 aa		4.19	□□□□□ -1.74
APL4	YPR029C	CLP1	Q08685	445 aa	Predicted RBP	4.19	□□□□□ -1.74
APL4	YPR029C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
APL4	YPR029C	APC11	Q12157	165 aa		4.19	□□□□□ -1.74
APL4	YPR029C	SCM3	Q12334	223 aa		4.19	□□□□□ -1.74
APL4	YPR029C	CAN1	P04817	590 aa		4.19	□□□□□ -1.74
APL4	YPR029C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	RIP-Chip
APL4	YPR029C	MRP7	P12687	371 aa		4.19	□□□□□ -1.74
APL4	YPR029C	RPL5	P26321	297 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	ARC19	P33204	171 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	SRP72	P38688	640 aa	Known RBP	4.19	□□□□□ -1.74
APL4	YPR029C	BCD1	P38772	366 aa		4.19	□□□□□ -1.74
APL4	YPR029C	VPS41	P38959	992 aa		4.19	□□□□□ -1.74
APL4	YPR029C	MEF2	P39677	819 aa		4.19	□□□□□ -1.74
APL4	YPR029C	YTA6	P40328	754 aa		4.19	□□□□□ -1.74
APL4	YPR029C	ATG3	P40344	310 aa		4.19	□□□□□ -1.74
APL4	YPR029C	TAP42	Q04372	366 aa		4.19	□□□□□ -1.74
APL4	YPR029C	ESC2	Q06340	456 aa		4.19	□□□□□ -1.74
APL4	YPR029C	MLC2	Q06580	163 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms