Protein–RNA interactions for Protein: P47912

FAA4, Long-chain-fatty-acid--CoA ligase 4, yeastyeast

Known RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
FAA4P47912 YML009W-BYML009W-B 477 nt20.61■□□□□ 0.89
FAA4P47912 NOP1YDL014W 984 nt20.32■□□□□ 0.84
FAA4P47912 NSR1YGR159C 1245 nt20.09■□□□□ 0.81
FAA4P47912 YKL036CYKL036C 393 nt19.26■□□□□ 0.67
FAA4P47912 YJL027CYJL027C 417 nt18.05■□□□□ 0.48
FAA4P47912 Q0297Q0297 156 nt18■□□□□ 0.47
FAA4P47912 SCS3YGL126W 1143 nt17.79■□□□□ 0.44
FAA4P47912 SRX1YKL086W 384 nt17.77■□□□□ 0.44
FAA4P47912 MDJ1YFL016C 1536 nt17.24■□□□□ 0.35
FAA4P47912 YCR051WYCR051W 669 nt16.84■□□□□ 0.29
FAA4P47912 YOL085CYOL085C 342 nt16.67■□□□□ 0.26
FAA4P47912 SCJ1YMR214W 1134 nt16.54■□□□□ 0.24
FAA4P47912 PKP1YIL042C 1185 nt16.29■□□□□ 0.2
FAA4P47912 RPP1BYDL130W 321 nt16.13■□□□□ 0.17
FAA4P47912 ATS1YAL020C 1002 nt16.09■□□□□ 0.17
FAA4P47912 TRN1tP(UGG)A 72 nt15.73■□□□□ 0.11
FAA4P47912 SUF9tP(UGG)F 72 nt15.73■□□□□ 0.11
FAA4P47912 SUF8tP(UGG)H 72 nt15.73■□□□□ 0.11
FAA4P47912 tP(UGG)LtP(UGG)L 72 nt15.73■□□□□ 0.11
FAA4P47912 SUF7tP(UGG)M 72 nt15.73■□□□□ 0.11
FAA4P47912 tP(UGG)N1tP(UGG)N1 72 nt15.73■□□□□ 0.11
FAA4P47912 tP(UGG)N2tP(UGG)N2 72 nt15.73■□□□□ 0.11
FAA4P47912 tP(UGG)O1tP(UGG)O1 72 nt15.73■□□□□ 0.11
FAA4P47912 SUF11tP(UGG)O2 72 nt15.73■□□□□ 0.11
FAA4P47912 DBP2YNL112W 1641 nt15.53■□□□□ 0.08
FAA4P47912 CCC1YLR220W 969 nt15.51■□□□□ 0.07
FAA4P47912 PET122YER153C 765 nt15.31■□□□□ 0.04
FAA4P47912 SCR1SCR1 522 nt15.31■□□□□ 0.04
FAA4P47912 tP(UGG)O3tP(UGG)O3 72 nt15.06■□□□□ 0
FAA4P47912 RRN5YLR141W 1092 nt14.95□□□□□ -0.02
FAA4P47912 RTC3YHR087W 336 nt14.94□□□□□ -0.02
FAA4P47912 PST2YDR032C 597 nt14.84□□□□□ -0.03
FAA4P47912 RSB1YOR049C 1065 nt14.77□□□□□ -0.05
FAA4P47912 Q0182Q0182 405 nt14.74□□□□□ -0.05
FAA4P47912 RVS167YDR388W 1449 nt14.7□□□□□ -0.06
FAA4P47912 YER088W-BYER088W-B 147 nt14.66□□□□□ -0.06
FAA4P47912 YBR190WYBR190W 312 nt14.61□□□□□ -0.07
FAA4P47912 YDJ1YNL064C 1230 nt14.6□□□□□ -0.07
FAA4P47912 YKL097CYKL097C 411 nt14.49□□□□□ -0.09
FAA4P47912 MOT3YMR070W 1473 nt14.42□□□□□ -0.1
FAA4P47912 SHR5YOL110W 714 nt14.34□□□□□ -0.11
FAA4P47912 GAR1YHR089C 618 nt14.12□□□□□ -0.15
FAA4P47912 SHU1YHL006C 453 nt14.06□□□□□ -0.16
FAA4P47912 YOR139CYOR139C 393 nt13.83□□□□□ -0.2
FAA4P47912 DEP1YAL013W 1218 nt13.69□□□□□ -0.22
FAA4P47912 TIR1YER011W 765 nt13.64□□□□□ -0.23
FAA4P47912 YAL037C-BYAL037C-B 975 nt13.64□□□□□ -0.23
FAA4P47912 YNL208WYNL208W 600 nt13.59□□□□□ -0.23
FAA4P47912 URN1YPR152C 1398 nt13.58□□□□□ -0.24
FAA4P47912 NPL3YDR432W 1245 nt13.56□□□□□ -0.24
FAA4P47912 RPN10YHR200W 807 nt13.51□□□□□ -0.25
FAA4P47912 SSA1YAL005C 1929 nt13.37□□□□□ -0.27
FAA4P47912 OPI9YLR338W 858 nt13.3□□□□□ -0.28
FAA4P47912 tM(CAU)CtM(CAU)C 72 nt13.27□□□□□ -0.29
FAA4P47912 IMT4tM(CAU)E 72 nt13.27□□□□□ -0.29
FAA4P47912 IMT3tM(CAU)J3 72 nt13.27□□□□□ -0.29
FAA4P47912 IMT1tM(CAU)O1 72 nt13.27□□□□□ -0.29
FAA4P47912 IMT2tM(CAU)P 72 nt13.27□□□□□ -0.29
FAA4P47912 YOL037CYOL037C 354 nt13.25□□□□□ -0.29
FAA4P47912 YGR021WYGR021W 873 nt13.24□□□□□ -0.29
FAA4P47912 SRB2YHR041C 633 nt13.24□□□□□ -0.29
FAA4P47912 HOM6YJR139C 1080 nt13.23□□□□□ -0.29
FAA4P47912 MNP1YGL068W 585 nt13.19□□□□□ -0.3
FAA4P47912 SSA3YBL075C 1950 nt13.15□□□□□ -0.3
FAA4P47912 WWM1YFL010C 636 nt13.12□□□□□ -0.31
FAA4P47912 PUT4YOR348C 1884 nt13.06□□□□□ -0.32
FAA4P47912 RKM5YLR137W 1104 nt13.03□□□□□ -0.32
FAA4P47912 SAH1YER043C 1350 nt13.03□□□□□ -0.32
FAA4P47912 YJR018WYJR018W 363 nt13□□□□□ -0.33
FAA4P47912 YFL021C-AYFL021C-A 855 nt12.94□□□□□ -0.34
FAA4P47912 PUS2YGL063W 1113 nt12.93□□□□□ -0.34
FAA4P47912 YJR120WYJR120W 351 nt12.93□□□□□ -0.34
FAA4P47912 YLR281CYLR281C 468 nt12.92□□□□□ -0.34
FAA4P47912 PUN1YLR414C 792 nt12.91□□□□□ -0.34
FAA4P47912 BSC6YOL137W 1494 nt12.89□□□□□ -0.35
FAA4P47912 RPP2BYDR382W 333 nt12.88□□□□□ -0.35
FAA4P47912 ARE1YCR048W 1833 nt12.76□□□□□ -0.37
FAA4P47912 WHI5YOR083W 888 nt12.76□□□□□ -0.37
FAA4P47912 BDH2YAL061W 1254 nt12.74□□□□□ -0.37
FAA4P47912 LSM3YLR438C-A 270 nt12.71□□□□□ -0.37
FAA4P47912 MRPL8YJL063C 717 nt12.7□□□□□ -0.38
FAA4P47912 PTC2YER089C 1395 nt12.63□□□□□ -0.39
FAA4P47912 POA1YBR022W 534 nt12.62□□□□□ -0.39
FAA4P47912 FMP45YDL222C 930 nt12.58□□□□□ -0.4
FAA4P47912 YPR011CYPR011C 981 nt12.58□□□□□ -0.4
FAA4P47912 YHR049C-AYHR049C-A 297 nt12.56□□□□□ -0.4
FAA4P47912 DSK2YMR276W 1122 nt12.55□□□□□ -0.4
FAA4P47912 YCH1YGR203W 447 nt12.53□□□□□ -0.4
FAA4P47912 IMP2'YIL154C 1041 nt12.53□□□□□ -0.4
FAA4P47912 INM2YDR287W 879 nt12.5□□□□□ -0.41
FAA4P47912 YLR236CYLR236C 324 nt12.48□□□□□ -0.41
FAA4P47912 ADO1YJR105W 1023 nt12.45□□□□□ -0.42
FAA4P47912 YBL100CYBL100C 315 nt12.42□□□□□ -0.42
FAA4P47912 NAB2YGL122C 1578 nt12.41□□□□□ -0.42
FAA4P47912 UBX6YJL048C 1191 nt12.4□□□□□ -0.42
FAA4P47912 TRM9YML014W 840 nt12.39□□□□□ -0.43
FAA4P47912 YLR154C-GYLR154C-G 150 nt12.37□□□□□ -0.43
FAA4P47912 YEL076C-AYEL076C-A 651 nt12.36□□□□□ -0.43
FAA4P47912 YEL076CYEL076C 651 nt12.36□□□□□ -0.43
FAA4P47912 YLR464WYLR464W 651 nt12.36□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 40.3 ms