RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W PRP31P49704 494 aaPredicted RBP8.46□□□□□ -1.06
PEX28YHR150W RPS15Q01855 142 aaKnown RBP8.46□□□□□ -1.06
PEX28YHR150W COG4Q06096 861 aa8.46□□□□□ -1.06
PEX28YHR150W TOS4Q06266 489 aa8.46□□□□□ -1.06
PEX28YHR150W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.46□□□□□ -1.06not detected
PEX28YHR150W CDC6P09119 513 aa8.45□□□□□ -1.06
PEX28YHR150W SAC6P32599 642 aaKnown RBP8.45□□□□□ -1.06
PEX28YHR150W CIN4P39110 191 aa8.45□□□□□ -1.06
PEX28YHR150W TIF4632P39936 914 aaKnown RBP8.45□□□□□ -1.06
PEX28YHR150W STR2P47164 639 aa8.45□□□□□ -1.06
PEX28YHR150W VPS75P53853 264 aa8.45□□□□□ -1.06
PEX28YHR150W HDA1P53973 706 aa8.45□□□□□ -1.06
PEX28YHR150W PDC1P06169 563 aaKnown RBP8.44□□□□□ -1.06
PEX28YHR150W PET123P17558 318 aa8.44□□□□□ -1.06
PEX28YHR150W VPS1P21576 704 aaKnown RBP8.44□□□□□ -1.06
PEX28YHR150W SWI4P25302 1093 aaKnown RBP8.44□□□□□ -1.06
PEX28YHR150W URA1P28272 314 aaPredicted RBP8.44□□□□□ -1.06
PEX28YHR150W YKL222CP35995 705 aa8.44□□□□□ -1.06
PEX28YHR150W RAD26P40352 1085 aa8.44□□□□□ -1.06
PEX28YHR150W GRX6Q12438 231 aa8.44□□□□□ -1.06
PEX28YHR150W RRP43P25359 394 aaPredicted RBP8.43□□□□□ -1.06
PEX28YHR150W SPC110P32380 944 aa8.43□□□□□ -1.06
PEX28YHR150W RTS1P38903 757 aa8.43□□□□□ -1.06
PEX28YHR150W MSH4P40965 878 aaPredicted RBP8.43□□□□□ -1.06
PEX28YHR150W CSC1Q06538 782 aa8.43□□□□□ -1.06
PEX28YHR150W YCG1Q06680 1035 aa8.43□□□□□ -1.06
PEX28YHR150W AFT2Q08957 416 aa8.43□□□□□ -1.06
PEX28YHR150W WRS1Q12109 432 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W SPB4P25808 606 aaPredicted RBP8.43□□□□□ -1.06
PEX28YHR150W ANP1P32629 500 aa8.43□□□□□ -1.06
PEX28YHR150W BMH2P34730 273 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W MGA2P40578 1113 aa8.43□□□□□ -1.06
PEX28YHR150W PTK2P47116 818 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W EAF6P47128 113 aa8.43□□□□□ -1.06
PEX28YHR150W PRP42Q03776 544 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W HCR1Q05775 265 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W GET3Q12154 354 aaKnown RBP8.43□□□□□ -1.06
PEX28YHR150W PMD1P32634 1753 aa8.42□□□□□ -1.06
PEX28YHR150W MSH3P25336 1018 aa8.42□□□□□ -1.06
PEX28YHR150W MRC1P25588 1096 aa8.42□□□□□ -1.06
PEX28YHR150W ICL1P28240 557 aaPredicted RBP8.42□□□□□ -1.06
PEX28YHR150W YKU70P32807 602 aa8.42□□□□□ -1.06
PEX28YHR150W RTT107P38850 1070 aa8.42□□□□□ -1.06
PEX28YHR150W SET4P42948 560 aa8.42□□□□□ -1.06
PEX28YHR150W PUS6P53294 404 aa8.42□□□□□ -1.06
PEX28YHR150W UTP13Q05946 817 aaKnown RBP8.42□□□□□ -1.06
PEX28YHR150W TFC6Q06339 672 aa8.42□□□□□ -1.06
PEX28YHR150W YPL260WQ08977 551 aa8.42□□□□□ -1.06
PEX28YHR150W PET111P08468 800 aa8.41□□□□□ -1.06
PEX28YHR150W RIT1P23796 513 aa8.41□□□□□ -1.06
PEX28YHR150W ADE17P38009 592 aaKnown RBP8.41□□□□□ -1.06
PEX28YHR150W ERT1P38140 529 aa8.41□□□□□ -1.06
PEX28YHR150W APL6P46682 809 aa8.41□□□□□ -1.06
PEX28YHR150W CUE3P53137 624 aaKnown RBP8.41□□□□□ -1.06
PEX28YHR150W VID27P40157 782 aa8.4□□□□□ -1.06
PEX28YHR150W APT1P49435 187 aaKnown RBP8.4□□□□□ -1.06
PEX28YHR150W GFD1Q04839 188 aaKnown RBP8.4□□□□□ -1.06
PEX28YHR150W TOP1P04786 769 aa8.4□□□□□ -1.07
PEX28YHR150W RPL22AP05749 121 aaKnown RBP8.4□□□□□ -1.07
PEX28YHR150W CTT1P06115 562 aa8.4□□□□□ -1.07
PEX28YHR150W ARG82P07250 355 aa8.4□□□□□ -1.07
PEX28YHR150W SNF3P10870 884 aa8.4□□□□□ -1.07
PEX28YHR150W PHO13P19881 312 aa8.4□□□□□ -1.07
PEX28YHR150W MAL31P38156 614 aa8.4□□□□□ -1.07
PEX28YHR150W ALG2P43636 503 aa8.4□□□□□ -1.07
PEX28YHR150W FAR11P53917 953 aa8.4□□□□□ -1.07
PEX28YHR150W EIS1Q05050 843 aaKnown RBP8.4□□□□□ -1.07
PEX28YHR150W GAS5Q08193 484 aa8.4□□□□□ -1.07
PEX28YHR150W PTC5Q12511 572 aa8.4□□□□□ -1.07
PEX28YHR150W RPS7AP26786 190 aaKnown RBP8.39□□□□□ -1.07
PEX28YHR150W SEC65P29478 273 aa8.39□□□□□ -1.07
PEX28YHR150W SAP190P36123 1033 aa8.39□□□□□ -1.07
PEX28YHR150W YHL050CP38721 697 aa8.39□□□□□ -1.07
PEX28YHR150W MCM16Q12262 181 aa8.39□□□□□ -1.07
PEX28YHR150W MAK31P23059 88 aa8.38□□□□□ -1.07
PEX28YHR150W MYO3P36006 1272 aa8.38□□□□□ -1.07
PEX28YHR150W SPT8P38915 602 aa8.38□□□□□ -1.07
PEX28YHR150W CAJ1P39101 391 aa8.38□□□□□ -1.07
PEX28YHR150W VPS8P39702 1274 aa8.38□□□□□ -1.07
PEX28YHR150W PCI8P40512 444 aa8.38□□□□□ -1.07
PEX28YHR150W SEN54Q02825 467 aaPredicted RBP8.38□□□□□ -1.07
PEX28YHR150W MMR1Q06324 491 aa8.38□□□□□ -1.07
PEX28YHR150W KEL3Q08979 651 aaPredicted RBP8.38□□□□□ -1.07
PEX28YHR150W RRG1Q12167 365 aaPredicted RBP8.38□□□□□ -1.07
PEX28YHR150W HAA1Q12753 694 aaKnown RBP8.38□□□□□ -1.07
PEX28YHR150W NBL1Q3E7Y6 73 aa8.38□□□□□ -1.07
PEX28YHR150W RAD61Q99359 647 aa8.38□□□□□ -1.07
PEX28YHR150W UBC1P21734 215 aaKnown RBP8.37□□□□□ -1.07
PEX28YHR150W BMH1P29311 267 aaKnown RBP8.37□□□□□ -1.07
PEX28YHR150W STO1P34160 861 aaKnown RBP8.37□□□□□ -1.07
PEX28YHR150W RXT2P38255 430 aa8.37□□□□□ -1.07
PEX28YHR150W YER156CP40093 338 aaKnown RBP8.37□□□□□ -1.07
PEX28YHR150W SEC9P40357 651 aa8.37□□□□□ -1.07
PEX28YHR150W CSM2P40465 213 aa8.37□□□□□ -1.07
PEX28YHR150W CAF130P53280 1122 aaPredicted RBP8.37□□□□□ -1.07
PEX28YHR150W NSG2P53898 299 aa8.37□□□□□ -1.07
PEX28YHR150W RRB1Q04225 511 aaKnown RBP8.37□□□□□ -1.07
PEX28YHR150W YOL098CQ12496 1037 aa8.37□□□□□ -1.07
PEX28YHR150W YKL068W-AQ3E826 78 aa8.37□□□□□ -1.07
PEX28YHR150W NOP14Q99207 810 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms