RNA–Protein interactions for RNA: YDR320C

SWA2, Transcript of Auxilin-like protein involved in vesicular transport, yeastyeast

Gene SWA2, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWA2YDR320C KTR2P33550 425 aa3.13□□□□□ -1.91
SWA2YDR320C NMD2P38798 1089 aaKnown RBP3.13□□□□□ -1.91
SWA2YDR320C RRP15Q06511 250 aaPredicted RBP3.13□□□□□ -1.91
SWA2YDR320C MNN4P36044 1178 aa3.12□□□□□ -1.91
SWA2YDR320C NTA1P40354 457 aa3.12□□□□□ -1.91
SWA2YDR320C HXT8P40886 569 aa3.12□□□□□ -1.91
SWA2YDR320C OYE3P41816 400 aaPredicted RBP3.12□□□□□ -1.91
SWA2YDR320C RGD2P43556 714 aa3.12□□□□□ -1.91
SWA2YDR320C RPS0BP46654 252 aaKnown RBP3.12□□□□□ -1.91
SWA2YDR320C ZDS1P50111 915 aaKnown RBP3.12□□□□□ -1.91
SWA2YDR320C CWC22P53333 577 aaKnown RBP3.12□□□□□ -1.91
SWA2YDR320C PUF6Q04373 656 aaKnown RBP3.12□□□□□ -1.91
SWA2YDR320C GLO4Q12320 285 aa3.12□□□□□ -1.91
SWA2YDR320C FIR1P40020 876 aa3.12□□□□□ -1.91
SWA2YDR320C NEO1P40527 1151 aa3.12□□□□□ -1.91
SWA2YDR320C APC11Q12157 165 aa3.12□□□□□ -1.91
SWA2YDR320C WHI3P34761 661 aaKnown RBP3.11□□□□□ -1.91
SWA2YDR320C TOM20P35180 183 aa3.11□□□□□ -1.91
SWA2YDR320C FLR1P38124 548 aa3.11□□□□□ -1.91
SWA2YDR320C FET4P40988 552 aa3.11□□□□□ -1.91
SWA2YDR320C ECM23Q02710 187 aa3.11□□□□□ -1.91
SWA2YDR320C CPS1P27614 576 aa3.1□□□□□ -1.91
SWA2YDR320C TOA1P32773 286 aa3.1□□□□□ -1.91
SWA2YDR320C TTI1P36097 1038 aa3.1□□□□□ -1.91
SWA2YDR320C PMC1P38929 1173 aaPredicted RBP3.1□□□□□ -1.91
SWA2YDR320C RCM1P53972 490 aa3.1□□□□□ -1.91
SWA2YDR320C UBX7P38349 436 aa3.1□□□□□ -1.91
SWA2YDR320C IPL1P38991 367 aa3.1□□□□□ -1.91
SWA2YDR320C NAB3P38996 802 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
SWA2YDR320C GPT2P36148 743 aa3.09□□□□□ -1.91
SWA2YDR320C NNF1P47149 201 aa3.09□□□□□ -1.91
SWA2YDR320C GCV1P48015 400 aa3.09□□□□□ -1.91
SWA2YDR320C RNH70P53331 553 aa3.09□□□□□ -1.91
SWA2YDR320C BRE1Q07457 700 aaKnown RBP3.09□□□□□ -1.91
SWA2YDR320C RLP24Q07915 199 aaKnown RBP3.09□□□□□ -1.91
SWA2YDR320C HAT1Q12341 374 aa3.09□□□□□ -1.91
SWA2YDR320C SRS2P12954 1174 aa3.09□□□□□ -1.92
SWA2YDR320C YML083CQ04526 418 aa3.09□□□□□ -1.92
SWA2YDR320C YLL054CQ12244 843 aa3.09□□□□□ -1.92
SWA2YDR320C ATE1P16639 503 aa3.08□□□□□ -1.92
SWA2YDR320C RPL34AP87262 121 aaPredicted RBP3.08□□□□□ -1.92
SWA2YDR320C YIG1Q08956 461 aa3.08□□□□□ -1.92
SWA2YDR320C TIF6Q12522 245 aaKnown RBP3.08□□□□□ -1.92
SWA2YDR320C PUP1P25043 261 aa3.07□□□□□ -1.92
SWA2YDR320C ADP1P25371 1049 aa3.07□□□□□ -1.92
SWA2YDR320C ALT1P52893 592 aa3.07□□□□□ -1.92
SWA2YDR320C DOT1Q04089 582 aaKnown RBP3.07□□□□□ -1.92
SWA2YDR320C GSF2Q04697 403 aaKnown RBP3.07□□□□□ -1.92
SWA2YDR320C LPX1Q12405 387 aaKnown RBP3.07□□□□□ -1.92
SWA2YDR320C PYC2P32327 1180 aaKnown RBP3.07□□□□□ -1.92
SWA2YDR320C IRS4P36115 615 aaKnown RBP3.07□□□□□ -1.92
SWA2YDR320C PUN1Q06991 263 aa3.07□□□□□ -1.92
SWA2YDR320C GAL11P19659 1081 aa3.06□□□□□ -1.92
SWA2YDR320C RAD55P38953 406 aa3.06□□□□□ -1.92
SWA2YDR320C PSY2P40164 858 aa3.06□□□□□ -1.92
SWA2YDR320C TPM2P40414 161 aa3.06□□□□□ -1.92
SWA2YDR320C CWC15Q03772 175 aaKnown RBP3.06□□□□□ -1.92
SWA2YDR320C HIF1Q12373 385 aa3.06□□□□□ -1.92
SWA2YDR320C YOL098CQ12496 1037 aa3.06□□□□□ -1.92
SWA2YDR320C CIT2P08679 460 aa3.05□□□□□ -1.92
SWA2YDR320C RPA135P22138 1203 aaKnown RBP3.05□□□□□ -1.92
SWA2YDR320C TSR4P25040 408 aa3.05□□□□□ -1.92
SWA2YDR320C ENP1P38333 483 aaKnown RBP3.05□□□□□ -1.92
SWA2YDR320C RIM8P53179 542 aa3.05□□□□□ -1.92
SWA2YDR320C YMR074CQ04773 145 aa3.05□□□□□ -1.92
SWA2YDR320C TRE1Q08919 783 aa3.05□□□□□ -1.92
SWA2YDR320C RAD2P07276 1031 aa3.05□□□□□ -1.92
SWA2YDR320C GRX4P32642 244 aa3.05□□□□□ -1.92
SWA2YDR320C SMC1P32908 1225 aa3.05□□□□□ -1.92
SWA2YDR320C PEX7P39108 375 aa3.05□□□□□ -1.92
SWA2YDR320C IOC3P43596 787 aa3.05□□□□□ -1.92
SWA2YDR320C TY4A-JP47023 414 aa3.05□□□□□ -1.92
SWA2YDR320C SVF1Q05515 481 aa3.05□□□□□ -1.92
SWA2YDR320C YOL057WQ08225 711 aa3.05□□□□□ -1.92
SWA2YDR320C RPS4AP0CX35 261 aaKnown RBP3.04□□□□□ -1.92
SWA2YDR320C RPS4BP0CX36 261 aaKnown RBP3.04□□□□□ -1.92
SWA2YDR320C STM1P39015 273 aaKnown RBP3.04□□□□□ -1.92
SWA2YDR320C AIM21P40563 679 aa3.04□□□□□ -1.92
SWA2YDR320C ALG12P53730 551 aa3.04□□□□□ -1.92
SWA2YDR320C SVL3Q03088 825 aaKnown RBP3.04□□□□□ -1.92
SWA2YDR320C SSY1Q03770 852 aa3.04□□□□□ -1.92
SWA2YDR320C YDL121CQ07541 149 aa3.04□□□□□ -1.92
SWA2YDR320C MSC6Q08818 692 aaKnown RBP3.04□□□□□ -1.92
SWA2YDR320C SOD2P00447 233 aa3.03□□□□□ -1.92
SWA2YDR320C SSB1P11484 613 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C VMA4P22203 233 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C AIM3P38266 947 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C FPR3P38911 411 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C SSB2P40150 613 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C MSH4P40965 878 aaPredicted RBP3.03□□□□□ -1.92
SWA2YDR320C GIR2Q03768 265 aaPredicted RBP3.03□□□□□ -1.92
SWA2YDR320C MSH6Q03834 1242 aa3.03□□□□□ -1.92
SWA2YDR320C YVC1Q12324 675 aa3.03□□□□□ -1.92
SWA2YDR320C TAD3Q9URQ3 322 aa3.03□□□□□ -1.92
SWA2YDR320C TRL1P09880 827 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C PRP5P21372 849 aaPredicted RBP3.03□□□□□ -1.92
SWA2YDR320C MPE1P35728 441 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C SUT1P53032 299 aaKnown RBP3.03□□□□□ -1.92
SWA2YDR320C CTR9P89105 1077 aa3.03□□□□□ -1.92
SWA2YDR320C YDL177CQ12257 170 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms