Protein–RNA interactions for Protein: P43556

RGD2, Rho-GTPase-activating protein RGD2, yeastyeast

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD2P43556 NSR1YGR159C 1245 nt21.09■□□□□ 0.97
RGD2P43556 YML009W-BYML009W-B 477 nt21■□□□□ 0.95
RGD2P43556 NOP1YDL014W 984 nt20.37■□□□□ 0.85
RGD2P43556 MDJ1YFL016C 1536 nt18.88■□□□□ 0.61
RGD2P43556 YKL036CYKL036C 393 nt18.57■□□□□ 0.56
RGD2P43556 SRX1YKL086W 384 nt17.78■□□□□ 0.44
RGD2P43556 Q0297Q0297 156 nt17.74■□□□□ 0.43
RGD2P43556 YJL027CYJL027C 417 nt17.45■□□□□ 0.38
RGD2P43556 SCS3YGL126W 1143 nt16.87■□□□□ 0.29
RGD2P43556 YCR051WYCR051W 669 nt16.83■□□□□ 0.28
RGD2P43556 DBP2YNL112W 1641 nt16.62■□□□□ 0.25
RGD2P43556 TRN1tP(UGG)A 72 nt16.2■□□□□ 0.18
RGD2P43556 SUF9tP(UGG)F 72 nt16.2■□□□□ 0.18
RGD2P43556 SUF8tP(UGG)H 72 nt16.2■□□□□ 0.18
RGD2P43556 tP(UGG)LtP(UGG)L 72 nt16.2■□□□□ 0.18
RGD2P43556 SUF7tP(UGG)M 72 nt16.2■□□□□ 0.18
RGD2P43556 tP(UGG)N1tP(UGG)N1 72 nt16.2■□□□□ 0.18
RGD2P43556 tP(UGG)N2tP(UGG)N2 72 nt16.2■□□□□ 0.18
RGD2P43556 tP(UGG)O1tP(UGG)O1 72 nt16.2■□□□□ 0.18
RGD2P43556 SUF11tP(UGG)O2 72 nt16.2■□□□□ 0.18
RGD2P43556 YBR190WYBR190W 312 nt16.19■□□□□ 0.18
RGD2P43556 YOL085CYOL085C 342 nt16.08■□□□□ 0.16
RGD2P43556 CCC1YLR220W 969 nt16■□□□□ 0.15
RGD2P43556 RPP1BYDL130W 321 nt15.92■□□□□ 0.14
RGD2P43556 PKP1YIL042C 1185 nt15.83■□□□□ 0.12
RGD2P43556 RTC3YHR087W 336 nt15.8■□□□□ 0.12
RGD2P43556 RVS167YDR388W 1449 nt15.63■□□□□ 0.09
RGD2P43556 SCJ1YMR214W 1134 nt15.46■□□□□ 0.07
RGD2P43556 tP(UGG)O3tP(UGG)O3 72 nt15.24■□□□□ 0.03
RGD2P43556 PET122YER153C 765 nt15.21■□□□□ 0.03
RGD2P43556 ATS1YAL020C 1002 nt15.1■□□□□ 0.01
RGD2P43556 SCR1SCR1 522 nt15.03■□□□□ -0
RGD2P43556 SHR5YOL110W 714 nt15.03■□□□□ -0
RGD2P43556 PUT4YOR348C 1884 nt14.84□□□□□ -0.03
RGD2P43556 YDJ1YNL064C 1230 nt14.77□□□□□ -0.05
RGD2P43556 RRN5YLR141W 1092 nt14.74□□□□□ -0.05
RGD2P43556 URN1YPR152C 1398 nt14.72□□□□□ -0.05
RGD2P43556 DEP1YAL013W 1218 nt14.62□□□□□ -0.07
RGD2P43556 OPI9YLR338W 858 nt14.56□□□□□ -0.08
RGD2P43556 ARE1YCR048W 1833 nt14.51□□□□□ -0.09
RGD2P43556 SAH1YER043C 1350 nt14.49□□□□□ -0.09
RGD2P43556 RPN10YHR200W 807 nt14.49□□□□□ -0.09
RGD2P43556 YER088W-BYER088W-B 147 nt14.46□□□□□ -0.09
RGD2P43556 GAR1YHR089C 618 nt14.44□□□□□ -0.1
RGD2P43556 YNL208WYNL208W 600 nt14.42□□□□□ -0.1
RGD2P43556 RSB1YOR049C 1065 nt14.39□□□□□ -0.11
RGD2P43556 POA1YBR022W 534 nt14.35□□□□□ -0.11
RGD2P43556 YHR049C-AYHR049C-A 297 nt14.33□□□□□ -0.12
RGD2P43556 SSA3YBL075C 1950 nt14.32□□□□□ -0.12
RGD2P43556 Q0182Q0182 405 nt14.24□□□□□ -0.13
RGD2P43556 PUN1YLR414C 792 nt14.15□□□□□ -0.14
RGD2P43556 BSC6YOL137W 1494 nt14.09□□□□□ -0.15
RGD2P43556 MOT3YMR070W 1473 nt14.08□□□□□ -0.16
RGD2P43556 YJR018WYJR018W 363 nt14.03□□□□□ -0.16
RGD2P43556 PTC2YER089C 1395 nt13.98□□□□□ -0.17
RGD2P43556 PST2YDR032C 597 nt13.98□□□□□ -0.17
RGD2P43556 TIR1YER011W 765 nt13.98□□□□□ -0.17
RGD2P43556 BUD23YCR047C 828 nt13.97□□□□□ -0.17
RGD2P43556 NAB2YGL122C 1578 nt13.85□□□□□ -0.19
RGD2P43556 SSA1YAL005C 1929 nt13.84□□□□□ -0.19
RGD2P43556 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
RGD2P43556 RPP2BYDR382W 333 nt13.72□□□□□ -0.21
RGD2P43556 DAL1YIR027C 1383 nt13.63□□□□□ -0.23
RGD2P43556 FIS1YIL065C 468 nt13.63□□□□□ -0.23
RGD2P43556 INM2YDR287W 879 nt13.58□□□□□ -0.24
RGD2P43556 SPT5YML010W 3192 nt13.57□□□□□ -0.24
RGD2P43556 FPR4YLR449W 1179 nt13.56□□□□□ -0.24
RGD2P43556 SRB2YHR041C 633 nt13.53□□□□□ -0.24
RGD2P43556 PHO4YFR034C 939 nt13.49□□□□□ -0.25
RGD2P43556 YKL097CYKL097C 411 nt13.44□□□□□ -0.26
RGD2P43556 SHU1YHL006C 453 nt13.41□□□□□ -0.26
RGD2P43556 YBL100CYBL100C 315 nt13.4□□□□□ -0.26
RGD2P43556 BDH2YAL061W 1254 nt13.39□□□□□ -0.27
RGD2P43556 YPS1YLR120C 1710 nt13.3□□□□□ -0.28
RGD2P43556 WWM1YFL010C 636 nt13.3□□□□□ -0.28
RGD2P43556 MEP2YNL142W 1500 nt13.25□□□□□ -0.29
RGD2P43556 FUN26YAL022C 1554 nt13.23□□□□□ -0.29
RGD2P43556 YGR021WYGR021W 873 nt13.22□□□□□ -0.29
RGD2P43556 YDR095CYDR095C 411 nt13.2□□□□□ -0.3
RGD2P43556 YAL037C-BYAL037C-B 975 nt13.19□□□□□ -0.3
RGD2P43556 LSM3YLR438C-A 270 nt13.19□□□□□ -0.3
RGD2P43556 SSA4YER103W 1929 nt13.18□□□□□ -0.3
RGD2P43556 YHR165W-AYHR165W-A 312 nt13.17□□□□□ -0.3
RGD2P43556 TRM9YML014W 840 nt13.17□□□□□ -0.3
RGD2P43556 YFL021C-AYFL021C-A 855 nt13.14□□□□□ -0.31
RGD2P43556 HOM6YJR139C 1080 nt13.14□□□□□ -0.31
RGD2P43556 ALF1YNL148C 765 nt13.1□□□□□ -0.31
RGD2P43556 CCT6YDR188W 1641 nt13.06□□□□□ -0.32
RGD2P43556 DCW1YKL046C 1350 nt13.02□□□□□ -0.33
RGD2P43556 MNP1YGL068W 585 nt13.01□□□□□ -0.33
RGD2P43556 SUF2tP(AGG)C 72 nt12.99□□□□□ -0.33
RGD2P43556 SUF10tP(AGG)N 72 nt12.99□□□□□ -0.33
RGD2P43556 RKM5YLR137W 1104 nt12.95□□□□□ -0.34
RGD2P43556 RPP2AYOL039W 321 nt12.95□□□□□ -0.34
RGD2P43556 SIS1YNL007C 1059 nt12.9□□□□□ -0.34
RGD2P43556 PTP1YDL230W 1008 nt12.89□□□□□ -0.35
RGD2P43556 YOR139CYOR139C 393 nt12.89□□□□□ -0.35
RGD2P43556 EMI2YDR516C 1503 nt12.87□□□□□ -0.35
RGD2P43556 YMR090WYMR090W 684 nt12.84□□□□□ -0.35
RGD2P43556 CAC2YML102W 1407 nt12.8□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms