RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Htatsf1Q8BGC0 757 aa20.12■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Gtf3c3Q3TMP1 882 aa20.12■□□□□ 0.81
Ckap4-201ENSMUST00000053871 NpatQ8BMA5 1420 aa20.12■□□□□ 0.81
Ckap4-201ENSMUST00000053871 NktrP30415 1453 aa20.11■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Amer1Q7TS75 1132 aa20.11■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Idi2Q8BFZ6 227 aa20.11■□□□□ 0.81
Ckap4-201ENSMUST00000053871 MvpQ9EQK5 861 aa20.11■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Ccdc146E9Q9F7 977 aa20.11■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Ric3Q8BPM6 367 aa20.1■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Stk31Q99MW1 1018 aa20.1■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Rfx1P48377 963 aa20.1■□□□□ 0.81
Ckap4-201ENSMUST00000053871 KnstrnQ9D9Z1 312 aaKnown RBP20.09■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Uhrf1bp1B2KF50 1429 aa20.09■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Aifm3Q3TY86 605 aa20.08■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Triml2E9PW10 424 aa20.08■□□□□ 0.81
Ckap4-201ENSMUST00000053871 Catsper2A2ARP9 588 aa20.08■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Plekhg1F6S200 1446 aa20.07■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Brd1E9PZ26 1189 aaKnown RBP20.07■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Eif4a2P10630 407 aa20.07■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Ggnbp2Q5SV77 696 aa20.07■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Ankrd44B2RXR6 993 aa20.06■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Itsn1Q9Z0R4 1714 aa20.05■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Irx6Q9ER75 438 aa20.05■□□□□ 0.8
Ckap4-201ENSMUST00000053871 CatipB9EKE5 520 aa20.05■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Kif2cQ922S8 721 aa20.05■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Nek4Q9Z1J2 792 aa20.05■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Fgd1P52734 960 aa20.04■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Tfip11Q9ERA6 838 aaKnown RBP20.04■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Cc2d1aQ8K1A6 943 aa20.04■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Snap23O09044 210 aa20.04■□□□□ 0.8
Ckap4-201ENSMUST00000053871 CarsQ9ER72 831 aaKnown RBP20.03■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Stk11ipQ3TAA7 1072 aa20.03■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Hs1bp3Q3TC93 395 aa20.02■□□□□ 0.8
Ckap4-201ENSMUST00000053871 Atp7bQ64446 1462 aa20.01■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Cabp4Q8VHC5 271 aa20.01■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Plcb2A3KGF7 1181 aa20■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Q3UJC8 639 aa20■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Wdr63B2RY71 923 aa20■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Trim27Q62158 513 aa20■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Prim1P20664 417 aa19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 TmpoQ61033 693 aaKnown RBP19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Smarca5Q91ZW3 1051 aaKnown RBP19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Nsfl1cQ9CZ44 370 aaKnown RBP19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Terf2O35144 541 aa19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Tbc1d9Q3UYK3 1264 aa19.99■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Nwd1A6H603 1563 aa19.97■□□□□ 0.79
Ckap4-201ENSMUST00000053871 FanclQ9CR14 375 aa19.97■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Larp1bA0A0A6YXJ7 370 aaKnown RBP19.97■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Vsig10D3YX43 558 aa19.97■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Plcd4Q8K3R3 807 aa19.97■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Gm21190A0A0G2JGJ6 266 aa19.96■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Tnnt1O88346 262 aa19.96■□□□□ 0.79
Ckap4-201ENSMUST00000053871 Eif4g2Q62448 906 aaKnown RBP19.95■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Chmp4bQ9D8B3 224 aaKnown RBP19.95■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Rtf1A2AQ19 715 aaKnown RBP19.95■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Nckap5lQ6GQX2 1323 aa19.95■□□□□ 0.78
Ckap4-201ENSMUST00000053871 DekQ7TNV0 380 aaKnown RBP19.94■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Cetn4Q8K4K1 168 aa19.94■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Chd4Q6PDQ2 1915 aaKnown RBP19.94■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Dmrtc1Q9D9R7 182 aa19.94■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Wwc1Q5SXA9 1104 aa19.93■□□□□ 0.78
Ckap4-201ENSMUST00000053871 PtpruB1AUH1 1446 aa19.93■□□□□ 0.78
Ckap4-201ENSMUST00000053871 LifrP42703 1092 aa19.93■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Ssh1Q76I79 1042 aa19.93■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Pdlim2Q8R1G6 349 aa19.93■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Kif24Q6NWW5 1356 aa19.92■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Znf541Q0GGX2 1363 aa19.92■□□□□ 0.78
Ckap4-201ENSMUST00000053871 HnrnpuQ8VEK3 800 aaKnown RBP19.91■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Antxr1Q9CZ52 562 aa19.91■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Prkar2bP31324 416 aa19.91■□□□□ 0.78
Ckap4-201ENSMUST00000053871 MarsQ68FL6 902 aaKnown RBP19.91■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Rab11fip3Q8CHD8 1047 aa19.91■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Dip2aQ8BWT5 1523 aa19.9■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Idi1P58044 227 aa19.9■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Ccne1Q61457 408 aa19.9■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Fam13aQ8BGI4 693 aa19.89■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Dennd6aQ8BH65 605 aa19.89■□□□□ 0.78
Ckap4-201ENSMUST00000053871 Sos1Q62245 1319 aa19.89■□□□□ 0.78
Ckap4-201ENSMUST00000053871 PplQ9R269 1755 aa19.89■□□□□ 0.78
Ckap4-201ENSMUST00000053871 CalcaP70160 136 aa19.89■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Q3TQI7 289 aaKnown RBP19.89■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Usp32F8VPZ3 1604 aa19.89■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Hoxb7P09024 217 aa19.89■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Dnttip2Q8R2M2 758 aaKnown RBP19.89■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Zc3h13E9Q784 1729 aaKnown RBP19.88■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Sv2bQ8BG39 683 aa19.88■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Gemin5Q8BX17 1502 aaKnown RBP19.87■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Fam83gQ5SWY7 812 aa19.87■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Gm10093D3YYI8 482 aa19.87■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Hdac1O09106 482 aaKnown RBP19.87■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Eya1P97767 591 aa19.87■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Pik3c2bE9QAN8 1632 aa19.86■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Cavin2Q63918 418 aaKnown RBP19.86■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Gm10563F6WIE4 79 aa19.85■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Tmem132eQ6IEE6 982 aa19.85■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Dip2bQ3UH60 1574 aa19.85■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Chl1P70232 1209 aa19.85■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Ap3b2Q9JME5 1082 aa19.85■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Chmp4cQ9D7F7 232 aa19.84■□□□□ 0.77
Ckap4-201ENSMUST00000053871 MyclP10166 368 aa19.84■□□□□ 0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms