Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Gm25239-201ENSMUST00000174915 86 ntBASIC56.72■■■■■ 6.67
Zc3h13E9Q784 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC53.06■■■■■ 6.08
Zc3h13E9Q784 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC51.87■■■■■ 5.89
Zc3h13E9Q784 Gm24109-201ENSMUST00000175489 103 ntBASIC49.79■■■■■ 5.56
Zc3h13E9Q784 Gm15042-201ENSMUST00000120212 883 ntBASIC48.79■■■■■ 5.4
Zc3h13E9Q784 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC48.01■■■■■ 5.28
Zc3h13E9Q784 Gm15045-201ENSMUST00000117359 883 ntBASIC47.9■■■■■ 5.26
Zc3h13E9Q784 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC47.82■■■■■ 5.25
Zc3h13E9Q784 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC47.81■■■■■ 5.24
Zc3h13E9Q784 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC47.45■■■■■ 5.19
Zc3h13E9Q784 Gm23366-201ENSMUST00000175022 89 ntBASIC47.18■■■■■ 5.14
Zc3h13E9Q784 AC153911.1-202ENSMUST00000218534 1034 ntBASIC46.68■■■■■ 5.06
Zc3h13E9Q784 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC46.29■■■■■ 5
Zc3h13E9Q784 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC46.23■■■■■ 4.99
Zc3h13E9Q784 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC46.12■■■■■ 4.97
Zc3h13E9Q784 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC46.1■■■■■ 4.97
Zc3h13E9Q784 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC45.83■■■■■ 4.93
Zc3h13E9Q784 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC45.34■■■■■ 4.85
Zc3h13E9Q784 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC45.33■■■■■ 4.85
Zc3h13E9Q784 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC45.18■■■■■ 4.82
Zc3h13E9Q784 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC45.16■■■■■ 4.82
Zc3h13E9Q784 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC45.09■■■■■ 4.81
Zc3h13E9Q784 Gm25238-201ENSMUST00000174914 89 ntBASIC45.07■■■■■ 4.81
Zc3h13E9Q784 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC44.85■■■■■ 4.77
Zc3h13E9Q784 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC44.34■■■■■ 4.69
Zc3h13E9Q784 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC44.32■■■■■ 4.69
Zc3h13E9Q784 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC44.26■■■■■ 4.68
Zc3h13E9Q784 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC44.19■■■■■ 4.66
Zc3h13E9Q784 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC44.08■■■■■ 4.65
Zc3h13E9Q784 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC44.01■■■■■ 4.64
Zc3h13E9Q784 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC43.96■■■■■ 4.63
Zc3h13E9Q784 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC43.89■■■■■ 4.62
Zc3h13E9Q784 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC43.76■■■■■ 4.6
Zc3h13E9Q784 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC43.69■■■■■ 4.58
Zc3h13E9Q784 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC43.56■■■■■ 4.56
Zc3h13E9Q784 Gm25262-201ENSMUST00000174934 133 ntBASIC43.56■■■■■ 4.56
Zc3h13E9Q784 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC43.51■■■■■ 4.56
Zc3h13E9Q784 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC43.46■■■■■ 4.55
Zc3h13E9Q784 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC43.31■■■■■ 4.52
Zc3h13E9Q784 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC43.2■■■■■ 4.51
Zc3h13E9Q784 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC43.13■■■■■ 4.49
Zc3h13E9Q784 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC43.08■■■■■ 4.49
Zc3h13E9Q784 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC42.94■■■■■ 4.47
Zc3h13E9Q784 Gm26115-201ENSMUST00000175605 87 ntBASIC42.94■■■■■ 4.46
Zc3h13E9Q784 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC42.87■■■■■ 4.45
Zc3h13E9Q784 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC42.79■■■■■ 4.44
Zc3h13E9Q784 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC42.76■■■■■ 4.44
Zc3h13E9Q784 Gm8109-201ENSMUST00000194076 746 ntBASIC42.71■■■■■ 4.43
Zc3h13E9Q784 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC42.65■■■■■ 4.42
Zc3h13E9Q784 Gm27325-201ENSMUST00000175467 74 ntBASIC42.65■■■■■ 4.42
Zc3h13E9Q784 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC42.63■■■■■ 4.42
Zc3h13E9Q784 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC42.55■■■■■ 4.4
Zc3h13E9Q784 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC42.53■■■■■ 4.4
Zc3h13E9Q784 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC42.39■■■■■ 4.38
Zc3h13E9Q784 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC42.36■■■■■ 4.37
Zc3h13E9Q784 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Zc3h13E9Q784 Rab21-202ENSMUST00000218831 843 ntBASIC42.28■■■■■ 4.36
Zc3h13E9Q784 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC42.23■■■■■ 4.35
Zc3h13E9Q784 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC42.1■■■■■ 4.33
Zc3h13E9Q784 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC42.03■■■■■ 4.32
Zc3h13E9Q784 Psd-208ENSMUST00000224556 2034 ntBASIC41.89■■■■■ 4.3
Zc3h13E9Q784 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC41.89■■■■■ 4.3
Zc3h13E9Q784 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC41.86■■■■■ 4.29
Zc3h13E9Q784 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
Zc3h13E9Q784 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC41.72■■■■■ 4.27
Zc3h13E9Q784 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC41.7■■■■■ 4.27
Zc3h13E9Q784 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC41.63■■■■■ 4.25
Zc3h13E9Q784 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC41.58■■■■■ 4.25
Zc3h13E9Q784 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC41.48■■■■■ 4.23
Zc3h13E9Q784 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC41.41■■■■■ 4.22
Zc3h13E9Q784 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC41.37■■■■■ 4.21
Zc3h13E9Q784 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC41.3■■■■■ 4.2
Zc3h13E9Q784 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Zc3h13E9Q784 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC41.2■■■■■ 4.19
Zc3h13E9Q784 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
Zc3h13E9Q784 Gm17082-201ENSMUST00000166043 1091 ntBASIC41.18■■■■■ 4.18
Zc3h13E9Q784 Gm24804-201ENSMUST00000174982 85 ntBASIC41.16■■■■■ 4.18
Zc3h13E9Q784 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
Zc3h13E9Q784 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC41.15■■■■■ 4.18
Zc3h13E9Q784 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC41.13■■■■■ 4.18
Zc3h13E9Q784 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC41.01■■■■■ 4.16
Zc3h13E9Q784 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Zc3h13E9Q784 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC40.99■■■■■ 4.15
Zc3h13E9Q784 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC40.9■■■■■ 4.14
Zc3h13E9Q784 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC40.83■■■■■ 4.13
Zc3h13E9Q784 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Zc3h13E9Q784 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC40.77■■■■■ 4.12
Zc3h13E9Q784 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC40.73■■■■■ 4.11
Zc3h13E9Q784 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC40.68■■■■■ 4.1
Zc3h13E9Q784 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC40.66■■■■■ 4.1
Zc3h13E9Q784 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC40.64■■■■■ 4.1
Zc3h13E9Q784 Zfp131-205ENSMUST00000223812 663 ntBASIC40.62■■■■■ 4.09
Zc3h13E9Q784 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC40.6■■■■■ 4.09
Zc3h13E9Q784 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC40.53■■■■■ 4.08
Zc3h13E9Q784 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC40.53■■■■■ 4.08
Zc3h13E9Q784 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC40.53■■■■■ 4.08
Zc3h13E9Q784 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC40.52■■■■■ 4.08
Zc3h13E9Q784 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC40.46■■■■■ 4.07
Zc3h13E9Q784 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC40.45■■■■■ 4.07
Zc3h13E9Q784 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC40.43■■■■■ 4.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms