Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
Pdlim2Q8R1G6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
Pdlim2Q8R1G6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.6■■■■□ 3.93
Pdlim2Q8R1G6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.22■■■■□ 3.87
Pdlim2Q8R1G6 Psd-208ENSMUST00000224556 2034 ntBASIC39.02■■■■□ 3.84
Pdlim2Q8R1G6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
Pdlim2Q8R1G6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Pdlim2Q8R1G6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.11■■■■□ 3.53
Pdlim2Q8R1G6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Pdlim2Q8R1G6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.95■■■■□ 3.51
Pdlim2Q8R1G6 Gm25239-201ENSMUST00000174915 86 ntBASIC36.94■■■■□ 3.5
Pdlim2Q8R1G6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
Pdlim2Q8R1G6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
Pdlim2Q8R1G6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
Pdlim2Q8R1G6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.64■■■■□ 3.46
Pdlim2Q8R1G6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
Pdlim2Q8R1G6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.32■■■■□ 3.41
Pdlim2Q8R1G6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Pdlim2Q8R1G6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Pdlim2Q8R1G6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Pdlim2Q8R1G6 Gm42596-201ENSMUST00000196305 1958 ntBASIC35.49■■■■□ 3.27
Pdlim2Q8R1G6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC35.48■■■■□ 3.27
Pdlim2Q8R1G6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.47■■■■□ 3.27
Pdlim2Q8R1G6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
Pdlim2Q8R1G6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Pdlim2Q8R1G6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Pdlim2Q8R1G6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.3■■■■□ 3.24
Pdlim2Q8R1G6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Pdlim2Q8R1G6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
Pdlim2Q8R1G6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.2■■■■□ 3.22
Pdlim2Q8R1G6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.2■■■■□ 3.22
Pdlim2Q8R1G6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Pdlim2Q8R1G6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
Pdlim2Q8R1G6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34.57■■■■□ 3.13
Pdlim2Q8R1G6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC34.54■■■■□ 3.12
Pdlim2Q8R1G6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
Pdlim2Q8R1G6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.5■■■■□ 3.11
Pdlim2Q8R1G6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
Pdlim2Q8R1G6 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.37■■■■□ 3.09
Pdlim2Q8R1G6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC34.34■■■■□ 3.09
Pdlim2Q8R1G6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Pdlim2Q8R1G6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.13■■■■□ 3.05
Pdlim2Q8R1G6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.1■■■■□ 3.05
Pdlim2Q8R1G6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pdlim2Q8R1G6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.06■■■■□ 3.04
Pdlim2Q8R1G6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34.01■■■■□ 3.04
Pdlim2Q8R1G6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.97■■■■□ 3.03
Pdlim2Q8R1G6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.8■■■■□ 3
Pdlim2Q8R1G6 Gm15042-201ENSMUST00000120212 883 ntBASIC33.74■■■□□ 2.99
Pdlim2Q8R1G6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.73■■■□□ 2.99
Pdlim2Q8R1G6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Pdlim2Q8R1G6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.69■■■□□ 2.98
Pdlim2Q8R1G6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
Pdlim2Q8R1G6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.62■■■□□ 2.97
Pdlim2Q8R1G6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC33.61■■■□□ 2.97
Pdlim2Q8R1G6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
Pdlim2Q8R1G6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Pdlim2Q8R1G6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
Pdlim2Q8R1G6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Pdlim2Q8R1G6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC33.52■■■□□ 2.96
Pdlim2Q8R1G6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.48■■■□□ 2.95
Pdlim2Q8R1G6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.47■■■□□ 2.95
Pdlim2Q8R1G6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
Pdlim2Q8R1G6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
Pdlim2Q8R1G6 Gm15045-201ENSMUST00000117359 883 ntBASIC33.4■■■□□ 2.94
Pdlim2Q8R1G6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
Pdlim2Q8R1G6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.37■■■□□ 2.93
Pdlim2Q8R1G6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Pdlim2Q8R1G6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
Pdlim2Q8R1G6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Pdlim2Q8R1G6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
Pdlim2Q8R1G6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC33.31■■■□□ 2.92
Pdlim2Q8R1G6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC33.29■■■□□ 2.92
Pdlim2Q8R1G6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Pdlim2Q8R1G6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Pdlim2Q8R1G6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
Pdlim2Q8R1G6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Pdlim2Q8R1G6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Pdlim2Q8R1G6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pdlim2Q8R1G6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pdlim2Q8R1G6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Pdlim2Q8R1G6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Pdlim2Q8R1G6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pdlim2Q8R1G6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pdlim2Q8R1G6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.95■■■□□ 2.87
Pdlim2Q8R1G6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Pdlim2Q8R1G6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Pdlim2Q8R1G6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Pdlim2Q8R1G6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Pdlim2Q8R1G6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC32.72■■■□□ 2.83
Pdlim2Q8R1G6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Pdlim2Q8R1G6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Pdlim2Q8R1G6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC32.52■■■□□ 2.8
Pdlim2Q8R1G6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.43■■■□□ 2.78
Pdlim2Q8R1G6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Pdlim2Q8R1G6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Pdlim2Q8R1G6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC32.34■■■□□ 2.77
Pdlim2Q8R1G6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Pdlim2Q8R1G6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Pdlim2Q8R1G6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms