Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Gm25239-201ENSMUST00000174915 86 ntBASIC41.93■■■■■ 4.3
Gm10093D3YYI8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC41.92■■■■■ 4.3
Gm10093D3YYI8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Gm10093D3YYI8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC40.45■■■■■ 4.07
Gm10093D3YYI8 Psd-208ENSMUST00000224556 2034 ntBASIC39.26■■■■□ 3.88
Gm10093D3YYI8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
Gm10093D3YYI8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
Gm10093D3YYI8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
Gm10093D3YYI8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38.13■■■■□ 3.69
Gm10093D3YYI8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
Gm10093D3YYI8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
Gm10093D3YYI8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
Gm10093D3YYI8 Gm15042-201ENSMUST00000120212 883 ntBASIC37.69■■■■□ 3.62
Gm10093D3YYI8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
Gm10093D3YYI8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
Gm10093D3YYI8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Gm10093D3YYI8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC37.39■■■■□ 3.58
Gm10093D3YYI8 Gm15045-201ENSMUST00000117359 883 ntBASIC37.12■■■■□ 3.53
Gm10093D3YYI8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
Gm10093D3YYI8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC36.89■■■■□ 3.5
Gm10093D3YYI8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36.71■■■■□ 3.47
Gm10093D3YYI8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.55■■■■□ 3.44
Gm10093D3YYI8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
Gm10093D3YYI8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC36.43■■■■□ 3.42
Gm10093D3YYI8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC36.3■■■■□ 3.4
Gm10093D3YYI8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm10093D3YYI8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gm10093D3YYI8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC36.2■■■■□ 3.39
Gm10093D3YYI8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC36.19■■■■□ 3.38
Gm10093D3YYI8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.38
Gm10093D3YYI8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
Gm10093D3YYI8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.06■■■■□ 3.36
Gm10093D3YYI8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Gm10093D3YYI8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36.02■■■■□ 3.36
Gm10093D3YYI8 Gm24109-201ENSMUST00000175489 103 ntBASIC35.92■■■■□ 3.34
Gm10093D3YYI8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
Gm10093D3YYI8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC35.87■■■■□ 3.33
Gm10093D3YYI8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Gm10093D3YYI8 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.52■■■■□ 3.28
Gm10093D3YYI8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
Gm10093D3YYI8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Gm10093D3YYI8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC35.42■■■■□ 3.26
Gm10093D3YYI8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.32■■■■□ 3.24
Gm10093D3YYI8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
Gm10093D3YYI8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35.13■■■■□ 3.21
Gm10093D3YYI8 Gm23366-201ENSMUST00000175022 89 ntBASIC35.12■■■■□ 3.21
Gm10093D3YYI8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
Gm10093D3YYI8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
Gm10093D3YYI8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
Gm10093D3YYI8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Gm10093D3YYI8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Gm10093D3YYI8 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.89■■■■□ 3.18
Gm10093D3YYI8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Gm10093D3YYI8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
Gm10093D3YYI8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Gm10093D3YYI8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.67■■■■□ 3.14
Gm10093D3YYI8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
Gm10093D3YYI8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Gm10093D3YYI8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Gm10093D3YYI8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Gm10093D3YYI8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
Gm10093D3YYI8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.59■■■■□ 3.13
Gm10093D3YYI8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.56■■■■□ 3.12
Gm10093D3YYI8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC34.52■■■■□ 3.12
Gm10093D3YYI8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm10093D3YYI8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Gm10093D3YYI8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
Gm10093D3YYI8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
Gm10093D3YYI8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Gm10093D3YYI8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Gm10093D3YYI8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Gm10093D3YYI8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Gm10093D3YYI8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC34.04■■■■□ 3.04
Gm10093D3YYI8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.02■■■■□ 3.04
Gm10093D3YYI8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Gm10093D3YYI8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Gm10093D3YYI8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.96■■■■□ 3.03
Gm10093D3YYI8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.83■■■■□ 3.01
Gm10093D3YYI8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Gm10093D3YYI8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Gm10093D3YYI8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33.7■■■□□ 2.99
Gm10093D3YYI8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Gm10093D3YYI8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC33.62■■■□□ 2.97
Gm10093D3YYI8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33.57■■■□□ 2.96
Gm10093D3YYI8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Gm10093D3YYI8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.5■■■□□ 2.95
Gm10093D3YYI8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Gm10093D3YYI8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.46■■■□□ 2.95
Gm10093D3YYI8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33.43■■■□□ 2.94
Gm10093D3YYI8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
Gm10093D3YYI8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Gm10093D3YYI8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
Gm10093D3YYI8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
Gm10093D3YYI8 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Gm10093D3YYI8 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
Gm10093D3YYI8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Gm10093D3YYI8 Gm27325-201ENSMUST00000175467 74 ntBASIC33.26■■■□□ 2.91
Gm10093D3YYI8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
Gm10093D3YYI8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Gm10093D3YYI8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms