RNA–Protein interactions for RNA: snR17b

snR17b, Transcript of Small nucleolar RNA (snoRNA) U3, yeastyeast

Gene snR17b, Length 332 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR17bsnR17b VPS38Q05919 439 aa5.42□□□□□ -1.54
snR17bsnR17b ATG9Q12142 997 aa5.42□□□□□ -1.54
snR17bsnR17b YOL098CQ12496 1037 aa5.42□□□□□ -1.54
snR17bsnR17b HXK1P04806 485 aaKnown RBP5.41□□□□□ -1.54
snR17bsnR17b PEP3P27801 918 aa5.41□□□□□ -1.54
snR17bsnR17b IMP2'P32351 346 aa5.41□□□□□ -1.54
snR17bsnR17b SWI3P32591 825 aa5.41□□□□□ -1.54
snR17bsnR17b YEL043WP32618 956 aa5.41□□□□□ -1.54
snR17bsnR17b ECM32P32644 1121 aaKnown RBP5.41□□□□□ -1.54
snR17bsnR17b MIF2P35201 549 aa5.41□□□□□ -1.54
snR17bsnR17b DEF1P35732 738 aaKnown RBP5.41□□□□□ -1.54
snR17bsnR17b SAP190P36123 1033 aa5.41□□□□□ -1.54
snR17bsnR17b PXL1P36166 706 aa5.41□□□□□ -1.54
snR17bsnR17b SPT8P38915 602 aa5.41□□□□□ -1.54
snR17bsnR17b CCC2P38995 1004 aa5.41□□□□□ -1.54
snR17bsnR17b HUL4P40985 892 aa5.41□□□□□ -1.54
snR17bsnR17b EPL1P43572 832 aa5.41□□□□□ -1.54
snR17bsnR17b PUS1Q12211 544 aaKnown RBP5.41□□□□□ -1.54
snR17bsnR17b RUD3Q12234 484 aaKnown RBP5.41□□□□□ -1.54
snR17bsnR17b SEC39Q12745 709 aa5.41□□□□□ -1.54
snR17bsnR17b SSK22P25390 1331 aaPredicted RBP5.41□□□□□ -1.54
snR17bsnR17b HSP82P02829 709 aaKnown RBP5.4□□□□□ -1.54
snR17bsnR17b DAL7P21826 554 aa5.4□□□□□ -1.54
snR17bsnR17b SEC65P29478 273 aa5.4□□□□□ -1.54
snR17bsnR17b RCR1P38212 213 aa5.4□□□□□ -1.54
snR17bsnR17b EPS1P40557 701 aa5.4□□□□□ -1.54
snR17bsnR17b BOP3P53958 396 aa5.4□□□□□ -1.54
snR17bsnR17b DOS2P54858 310 aa5.4□□□□□ -1.54
snR17bsnR17b VPS64Q03944 604 aa5.4□□□□□ -1.54
snR17bsnR17b ESF1Q06344 628 aaKnown RBP5.4□□□□□ -1.54
snR17bsnR17b SDH5Q08230 162 aa5.4□□□□□ -1.54
snR17bsnR17b YOR223WQ12015 292 aa5.4□□□□□ -1.54
snR17bsnR17b OSH2Q12451 1283 aa5.4□□□□□ -1.54
snR17bsnR17b YRF1-2P40105 1681 aa5.4□□□□□ -1.55
snR17bsnR17b RGP1P16664 663 aa5.39□□□□□ -1.55
snR17bsnR17b ADE17P38009 592 aaKnown RBP5.39□□□□□ -1.55
snR17bsnR17b MIC19P43594 170 aa5.39□□□□□ -1.55
snR17bsnR17b YJR079WP47126 109 aa5.39□□□□□ -1.55
snR17bsnR17b MAK10Q02197 733 aa5.39□□□□□ -1.55
snR17bsnR17b YDR338CQ05497 695 aa5.39□□□□□ -1.55
snR17bsnR17b HCR1Q05775 265 aaKnown RBP5.39□□□□□ -1.55
snR17bsnR17b VAC14Q06708 880 aa5.39□□□□□ -1.55
snR17bsnR17b AFT2Q08957 416 aa5.39□□□□□ -1.55
snR17bsnR17b RRP5Q05022 1729 aaKnown RBP5.38□□□□□ -1.55
snR17bsnR17b AI2P03876 854 aa5.38□□□□□ -1.55
snR17bsnR17b RAD1P06777 1100 aa5.38□□□□□ -1.55
snR17bsnR17b SEC23P15303 768 aaKnown RBP5.38□□□□□ -1.55
snR17bsnR17b DIT2P21595 489 aa5.38□□□□□ -1.55
snR17bsnR17b OPI1P21957 404 aa5.38□□□□□ -1.55
snR17bsnR17b SAC6P32599 642 aaKnown RBP5.38□□□□□ -1.55
snR17bsnR17b PTC4P38089 393 aa5.38□□□□□ -1.55
snR17bsnR17b BUD16P39988 312 aa5.38□□□□□ -1.55
snR17bsnR17b VTC3Q02725 835 aa5.38□□□□□ -1.55
snR17bsnR17b GFD1Q04839 188 aaKnown RBP5.38□□□□□ -1.55
snR17bsnR17b INP54Q08227 384 aaKnown RBP5.38□□□□□ -1.55
snR17bsnR17b RPL22AP05749 121 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b SPT2P06843 333 aaPredicted RBP5.37□□□□□ -1.55
snR17bsnR17b PRP16P15938 1071 aaPredicted RBP5.37□□□□□ -1.55
snR17bsnR17b PFK2P16862 959 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
snR17bsnR17b HCA4P20448 770 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b SPT5P27692 1063 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b NFU1P32860 256 aa5.37□□□□□ -1.55
snR17bsnR17b YET1P35723 206 aa5.37□□□□□ -1.55
snR17bsnR17b HEL1P36113 551 aa5.37□□□□□ -1.55
snR17bsnR17b SHM1P37292 490 aaPredicted RBP5.37□□□□□ -1.55
snR17bsnR17b MCX1P38323 520 aaPredicted RBP5.37□□□□□ -1.55
snR17bsnR17b OSH3P38713 996 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b SET1P38827 1080 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b SMF1P38925 575 aa5.37□□□□□ -1.55
snR17bsnR17b VPS8P39702 1274 aa5.37□□□□□ -1.55
snR17bsnR17b RIO2P40160 425 aaKnown RBP5.37□□□□□ -1.55
snR17bsnR17b EFM4P40516 257 aa5.37□□□□□ -1.55
snR17bsnR17b VPS4P52917 437 aa5.37□□□□□ -1.55
snR17bsnR17b MEC3Q02574 474 aa5.37□□□□□ -1.55
snR17bsnR17b HOT1Q03213 719 aa5.37□□□□□ -1.55
snR17bsnR17b STE23Q06010 1027 aa5.37□□□□□ -1.55
snR17bsnR17b SLM3Q12093 417 aa5.37□□□□□ -1.55
snR17bsnR17b DCS2Q12123 353 aa5.37□□□□□ -1.55
snR17bsnR17b ARD1P07347 238 aaPredicted RBP5.36□□□□□ -1.55
snR17bsnR17b RPS6AP0CX37 236 aaKnown RBP5.36□□□□□ -1.55
snR17bsnR17b RPS6BP0CX38 236 aaPredicted RBP5.36□□□□□ -1.55
snR17bsnR17b PRE10P21242 288 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
snR17bsnR17b RAD53P22216 821 aa5.36□□□□□ -1.55
snR17bsnR17b CDC60P26637 1090 aaKnown RBP5.36□□□□□ -1.55
snR17bsnR17b URA1P28272 314 aaPredicted RBP5.36□□□□□ -1.55
snR17bsnR17b APL2P36000 726 aaPredicted RBP5.36□□□□□ -1.55
snR17bsnR17b EFM2P38347 419 aa5.36□□□□□ -1.55
snR17bsnR17b RPN10P38886 268 aaKnown RBP5.36□□□□□ -1.55
snR17bsnR17b ATG3P40344 310 aa5.36□□□□□ -1.55
snR17bsnR17b XKS1P42826 600 aa5.36□□□□□ -1.55
snR17bsnR17b FYV8P46949 817 aaKnown RBP5.36□□□□□ -1.55
snR17bsnR17b YMR1P47147 688 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
snR17bsnR17b NOP6Q07623 225 aaKnown RBP5.36□□□□□ -1.55
snR17bsnR17b HMI1Q12039 706 aa5.36□□□□□ -1.55
snR17bsnR17b GYP5Q12344 894 aa5.36□□□□□ -1.55
snR17bsnR17b LAM4P38800 1345 aa5.35□□□□□ -1.55
snR17bsnR17b CDC37P06101 506 aaKnown RBP5.35□□□□□ -1.55
snR17bsnR17b RAD3P06839 778 aa5.35□□□□□ -1.55
snR17bsnR17b MTF2P10849 440 aa5.35□□□□□ -1.55
snR17bsnR17b SEC18P18759 758 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 72.4 ms