RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	ENP2	P48234	707 aa	Known RBP	11.28	□□□□□ -0.6
MSB4	YOL112W	PCL8	Q08966	492 aa		11.28	□□□□□ -0.6
MSB4	YOL112W	KEL3	Q08979	651 aa	Predicted RBP	11.28	□□□□□ -0.6
MSB4	YOL112W	OPI1	P21957	404 aa		11.27	□□□□□ -0.6
MSB4	YOL112W	CHO2	P05374	869 aa	Known RBP	11.26	□□□□□ -0.61
MSB4	YOL112W	GAL2	P13181	574 aa		11.26	□□□□□ -0.61
MSB4	YOL112W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
MSB4	YOL112W	YBL028C	P38202	106 aa		11.26	□□□□□ -0.61
MSB4	YOL112W	YPL260W	Q08977	551 aa		11.26	□□□□□ -0.61
MSB4	YOL112W	TUB2	P02557	457 aa	Known RBP	11.25	□□□□□ -0.61
MSB4	YOL112W	MSH4	P40965	878 aa	Predicted RBP	11.25	□□□□□ -0.61
MSB4	YOL112W	HXT17	P53631	564 aa		11.25	□□□□□ -0.61
MSB4	YOL112W	RRT6	P53117	311 aa	Predicted RBP	11.25	□□□□□ -0.61
MSB4	YOL112W	FPR4	Q06205	392 aa	Predicted RBP	11.25	□□□□□ -0.61
MSB4	YOL112W	YDL124W	Q07551	312 aa	Known RBP	11.25	□□□□□ -0.61
MSB4	YOL112W	KIN1	P13185	1064 aa		11.24	□□□□□ -0.61
MSB4	YOL112W	MET1	P36150	593 aa		11.24	□□□□□ -0.61
MSB4	YOL112W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
MSB4	YOL112W	GCR2	Q01722	534 aa		11.24	□□□□□ -0.61
MSB4	YOL112W	PEX29	Q03370	554 aa		11.24	□□□□□ -0.61
MSB4	YOL112W	HVG1	P0CE11	249 aa		11.23	□□□□□ -0.61
MSB4	YOL112W	TPS3	P38426	1054 aa	Known RBP	11.23	□□□□□ -0.61
MSB4	YOL112W	RTS1	P38903	757 aa		11.23	□□□□□ -0.61
MSB4	YOL112W	RRP8	P38961	392 aa	Known RBP	11.23	□□□□□ -0.61
MSB4	YOL112W	HXT13	P39924	564 aa		11.23	□□□□□ -0.61
MSB4	YOL112W	SLN1	P39928	1220 aa	Predicted RBP	11.23	□□□□□ -0.61
MSB4	YOL112W	SPT21	P35209	758 aa		11.22	□□□□□ -0.61
MSB4	YOL112W	GIN4	Q12263	1142 aa		11.22	□□□□□ -0.61
MSB4	YOL112W	DLD1	P32891	587 aa		11.21	□□□□□ -0.61
MSB4	YOL112W	VID27	P40157	782 aa		11.21	□□□□□ -0.61
MSB4	YOL112W	MRD1	Q06106	887 aa	Known RBP	11.21	□□□□□ -0.61
MSB4	YOL112W	PRE8	P23639	250 aa		11.2	□□□□□ -0.62
MSB4	YOL112W	UFD2	P54860	961 aa		11.2	□□□□□ -0.62
MSB4	YOL112W	RPS15	Q01855	142 aa	Known RBP	11.2	□□□□□ -0.62
MSB4	YOL112W	RAD61	Q99359	647 aa		11.2	□□□□□ -0.62
MSB4	YOL112W	MPH3	P0CE00	602 aa		11.19	□□□□□ -0.62
MSB4	YOL112W	BSD2	P38356	321 aa		11.19	□□□□□ -0.62
MSB4	YOL112W	ACA1	P39970	489 aa		11.19	□□□□□ -0.62
MSB4	YOL112W	DUS1	P53759	423 aa	Known RBP	11.19	□□□□□ -0.62
MSB4	YOL112W	PGA3	Q12746	312 aa	Known RBP	11.19	□□□□□ -0.62
MSB4	YOL112W	PRO3	P32263	286 aa	Known RBP	11.19	□□□□□ -0.62
MSB4	YOL112W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.19	□□□□□ -0.62	not detected
MSB4	YOL112W	CST26	P38226	397 aa		11.19	□□□□□ -0.62
MSB4	YOL112W	SSF2	Q12153	453 aa	Predicted RBP	11.19	□□□□□ -0.62
MSB4	YOL112W	SRM1	P21827	482 aa		11.18	□□□□□ -0.62
MSB4	YOL112W	CIC1	P38779	376 aa	Known RBP	11.18	□□□□□ -0.62
MSB4	YOL112W	SNU71	P53207	620 aa	Known RBP	11.18	□□□□□ -0.62
MSB4	YOL112W	HDA1	P53973	706 aa		11.18	□□□□□ -0.62
MSB4	YOL112W	LAP2	Q10740	671 aa		11.18	□□□□□ -0.62
MSB4	YOL112W	RPC31	P17890	251 aa		11.17	□□□□□ -0.62
MSB4	YOL112W	CHS3	P29465	1165 aa		11.17	□□□□□ -0.62
MSB4	YOL112W	SKG3	Q06315	1026 aa		11.17	□□□□□ -0.62
MSB4	YOL112W	KRS1	P15180	591 aa	Known RBP	11.16	□□□□□ -0.62
MSB4	YOL112W	MYO3	P36006	1272 aa		11.16	□□□□□ -0.62
MSB4	YOL112W	PTK2	P47116	818 aa	Known RBP	11.16	□□□□□ -0.62
MSB4	YOL112W	CST9	Q06032	482 aa		11.16	□□□□□ -0.62
MSB4	YOL112W	IMP2'	P32351	346 aa		11.15	□□□□□ -0.62
MSB4	YOL112W	TIF4631	P39935	952 aa	Known RBP	11.15	□□□□□ -0.62
MSB4	YOL112W	SPN1	Q06505	410 aa	Predicted RBP	11.15	□□□□□ -0.62
MSB4	YOL112W	RIT1	P23796	513 aa		11.14	□□□□□ -0.63
MSB4	YOL112W	ANP1	P32629	500 aa		11.14	□□□□□ -0.63
MSB4	YOL112W	RER2	P35196	286 aa		11.14	□□□□□ -0.63
MSB4	YOL112W	CRG1	P38892	291 aa	RIP-Chip data	11.14	□□□□□ -0.63	not detected
MSB4	YOL112W	FAP1	P53971	965 aa		11.14	□□□□□ -0.63
MSB4	YOL112W	RBA50	Q04418	439 aa		11.14	□□□□□ -0.63
MSB4	YOL112W	TIF6	Q12522	245 aa	Known RBP	11.14	□□□□□ -0.63
MSB4	YOL112W	FBP1	P09201	348 aa		11.13	□□□□□ -0.63
MSB4	YOL112W	ACE2	P21192	770 aa		11.13	□□□□□ -0.63
MSB4	YOL112W	YDJ1	P25491	409 aa	Known RBP	11.13	□□□□□ -0.63
MSB4	YOL112W	APE3	P37302	537 aa	Known RBP	11.13	□□□□□ -0.63
MSB4	YOL112W	VPS8	P39702	1274 aa		11.13	□□□□□ -0.63
MSB4	YOL112W	PEP3	P27801	918 aa		11.12	□□□□□ -0.63
MSB4	YOL112W	MOT2	P34909	587 aa	Known RBP	11.12	□□□□□ -0.63
MSB4	YOL112W	OCT1	P35999	772 aa		11.12	□□□□□ -0.63
MSB4	YOL112W	JIP4	Q03361	876 aa		11.12	□□□□□ -0.63
MSB4	YOL112W	SAM2	P19358	384 aa	Known RBP	11.12	□□□□□ -0.63
MSB4	YOL112W	AIM9	P40053	627 aa	Known RBP	11.12	□□□□□ -0.63
MSB4	YOL112W	MYO1	P08964	1928 aa		11.11	□□□□□ -0.63
MSB4	YOL112W	TUS1	Q06412	1307 aa		11.11	□□□□□ -0.63
MSB4	YOL112W	TPM1	P17536	199 aa	Known RBP	11.11	□□□□□ -0.63
MSB4	YOL112W	ASH1	P34233	588 aa		11.11	□□□□□ -0.63
MSB4	YOL112W	TRL1	P09880	827 aa	Known RBP	11.1	□□□□□ -0.63
MSB4	YOL112W	TFC6	Q06339	672 aa		11.1	□□□□□ -0.63
MSB4	YOL112W	IXR1	P33417	597 aa		11.09	□□□□□ -0.63
MSB4	YOL112W	CSM2	P40465	213 aa		11.09	□□□□□ -0.63
MSB4	YOL112W	YJL007C	P47080	104 aa		11.09	□□□□□ -0.63
MSB4	YOL112W	ESF1	Q06344	628 aa	Known RBP	11.09	□□□□□ -0.63
MSB4	YOL112W	SUB2	Q07478	446 aa	Known RBP	11.09	□□□□□ -0.63
MSB4	YOL112W	ERG12	P07277	443 aa		11.08	□□□□□ -0.64
MSB4	YOL112W	SPB4	P25808	606 aa	Predicted RBP	11.08	□□□□□ -0.64
MSB4	YOL112W	RSC30	P38781	883 aa		11.08	□□□□□ -0.64
MSB4	YOL112W	LYS14	P40971	790 aa		11.08	□□□□□ -0.64
MSB4	YOL112W	KRI1	P42846	591 aa	Known RBP	11.08	□□□□□ -0.64
MSB4	YOL112W	YML037C	Q03703	340 aa		11.08	□□□□□ -0.64
MSB4	YOL112W	EST2	Q06163	884 aa		11.08	□□□□□ -0.64
MSB4	YOL112W	MAK31	P23059	88 aa		11.07	□□□□□ -0.64
MSB4	YOL112W	UBP9	P39967	754 aa		11.07	□□□□□ -0.64
MSB4	YOL112W	NET1	P47035	1189 aa		11.07	□□□□□ -0.64
MSB4	YOL112W	FOL1	P53848	824 aa		11.07	□□□□□ -0.64
MSB4	YOL112W	RPT6	Q01939	405 aa	Known RBP	11.07	□□□□□ -0.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms