RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C FPK1P53739 893 aa8.75□□□□□ -1.01
RRP43YCR035C KAR5Q04746 504 aa8.75□□□□□ -1.01
RRP43YCR035C LAM4P38800 1345 aa8.75□□□□□ -1.01
RRP43YCR035C DUR1,2P32528 1835 aaKnown RBP8.75□□□□□ -1.01
RRP43YCR035C SNF3P10870 884 aa8.74□□□□□ -1.01
RRP43YCR035C NPL4P33755 580 aa8.74□□□□□ -1.01
RRP43YCR035C UBP9P39967 754 aa8.74□□□□□ -1.01
RRP43YCR035C IOC3P43596 787 aa8.74□□□□□ -1.01
RRP43YCR035C PUS6P53294 404 aa8.74□□□□□ -1.01
RRP43YCR035C RLF2Q12495 606 aa8.74□□□□□ -1.01
RRP43YCR035C GAP1P19145 602 aaPredicted RBP8.73□□□□□ -1.01
RRP43YCR035C MET1P36150 593 aa8.73□□□□□ -1.01
RRP43YCR035C GEF1P37020 779 aa8.73□□□□□ -1.01
RRP43YCR035C APL6P46682 809 aa8.73□□□□□ -1.01
RRP43YCR035C PIP2P52960 996 aa8.73□□□□□ -1.01
RRP43YCR035C TRM44Q02648 567 aaKnown RBP8.73□□□□□ -1.01
RRP43YCR035C SEN54Q02825 467 aaPredicted RBP8.73□□□□□ -1.01
RRP43YCR035C CRF1Q04930 467 aa8.73□□□□□ -1.01
RRP43YCR035C ACK1Q07622 623 aaPredicted RBP8.73□□□□□ -1.01
RRP43YCR035C TPM1P17536 199 aaKnown RBP8.72□□□□□ -1.01
RRP43YCR035C COQ1P18900 473 aa8.72□□□□□ -1.01
RRP43YCR035C PPM2Q08282 695 aa8.72□□□□□ -1.01
RRP43YCR035C PGA3Q12746 312 aaKnown RBP8.72□□□□□ -1.01
RRP43YCR035C FIG2P25653 1609 aa8.72□□□□□ -1.01
RRP43YCR035C TRL1P09880 827 aaKnown RBP8.71□□□□□ -1.02
RRP43YCR035C CIC1P38779 376 aaKnown RBP8.71□□□□□ -1.02
RRP43YCR035C RRP8P38961 392 aaKnown RBP8.71□□□□□ -1.02
RRP43YCR035C SLN1P39928 1220 aaPredicted RBP8.71□□□□□ -1.02
RRP43YCR035C VPS4P52917 437 aa8.71□□□□□ -1.02
RRP43YCR035C NSG2P53898 299 aa8.71□□□□□ -1.02
RRP43YCR035C FLO11P08640 1367 aa8.71□□□□□ -1.02
RRP43YCR035C HKR1P41809 1802 aa8.7□□□□□ -1.02
RRP43YCR035C GUT1P32190 709 aa8.7□□□□□ -1.02
RRP43YCR035C GLC3P32775 704 aa8.7□□□□□ -1.02
RRP43YCR035C YOL036WQ08206 761 aa8.7□□□□□ -1.02
RRP43YCR035C SSF2Q12153 453 aaPredicted RBP8.7□□□□□ -1.02
RRP43YCR035C AIM7Q12156 149 aa8.7□□□□□ -1.02
RRP43YCR035C CHO2P05374 869 aaKnown RBP8.69□□□□□ -1.02
RRP43YCR035C IMP2'P32351 346 aa8.69□□□□□ -1.02
RRP43YCR035C STV1P37296 890 aa8.69□□□□□ -1.02
RRP43YCR035C FET4P40988 552 aa8.69□□□□□ -1.02
RRP43YCR035C ATH1P48016 1211 aa8.69□□□□□ -1.02
RRP43YCR035C THS1P04801 734 aaKnown RBP8.68□□□□□ -1.02
RRP43YCR035C RNR2P09938 399 aaKnown RBP8.68□□□□□ -1.02
RRP43YCR035C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.68□□□□□ -1.02not detected
RRP43YCR035C OPY1P38271 328 aa8.68□□□□□ -1.02
RRP43YCR035C AIM9P40053 627 aaKnown RBP8.68□□□□□ -1.02
RRP43YCR035C MRD1Q06106 887 aaKnown RBP8.68□□□□□ -1.02
RRP43YCR035C ESF1Q06344 628 aaKnown RBP8.68□□□□□ -1.02
RRP43YCR035C SPN1Q06505 410 aaPredicted RBP8.68□□□□□ -1.02
RRP43YCR035C YPL260WQ08977 551 aa8.68□□□□□ -1.02
RRP43YCR035C PCT1P13259 424 aa8.67□□□□□ -1.02
RRP43YCR035C HPR1P17629 752 aaKnown RBP8.67□□□□□ -1.02
RRP43YCR035C RTS1P38903 757 aa8.67□□□□□ -1.02
RRP43YCR035C YJL171CP46992 396 aa8.67□□□□□ -1.02
RRP43YCR035C MTC3P53077 123 aa8.67□□□□□ -1.02
RRP43YCR035C YGR117CP53270 476 aa8.67□□□□□ -1.02
RRP43YCR035C RPS15Q01855 142 aaKnown RBP8.67□□□□□ -1.02
RRP43YCR035C TIM50Q02776 476 aa8.67□□□□□ -1.02
RRP43YCR035C SRS2P12954 1174 aa8.66□□□□□ -1.02
RRP43YCR035C PEP3P27801 918 aa8.66□□□□□ -1.02
RRP43YCR035C RTG2P32608 588 aaKnown RBP8.66□□□□□ -1.02
RRP43YCR035C RER2P35196 286 aa8.66□□□□□ -1.02
RRP43YCR035C CRG1P38892 291 aaRIP-Chip data8.66□□□□□ -1.02not detected
RRP43YCR035C UTP7P40055 554 aaKnown RBP8.66□□□□□ -1.02
RRP43YCR035C SPO22P40511 975 aa8.66□□□□□ -1.02
RRP43YCR035C UFD2P54860 961 aa8.66□□□□□ -1.02
RRP43YCR035C KEL3Q08979 651 aaPredicted RBP8.66□□□□□ -1.02
RRP43YCR035C CBP1P07252 654 aa8.65□□□□□ -1.02
RRP43YCR035C YHL050CP38721 697 aa8.65□□□□□ -1.02
RRP43YCR035C VID28P40547 921 aa8.65□□□□□ -1.02
RRP43YCR035C ARP5P53946 755 aa8.65□□□□□ -1.02
RRP43YCR035C PCL8Q08966 492 aa8.65□□□□□ -1.02
RRP43YCR035C YLR278CQ05854 1341 aa8.64□□□□□ -1.03
RRP43YCR035C VID27P40157 782 aa8.64□□□□□ -1.03
RRP43YCR035C REF2P42073 533 aaPredicted RBP8.64□□□□□ -1.03
RRP43YCR035C RAD61Q99359 647 aa8.64□□□□□ -1.03
RRP43YCR035C ANP1P32629 500 aa8.63□□□□□ -1.03
RRP43YCR035C YBL028CP38202 106 aa8.63□□□□□ -1.03
RRP43YCR035C VPS20Q04272 221 aa8.63□□□□□ -1.03
RRP43YCR035C EST2Q06163 884 aa8.63□□□□□ -1.03
RRP43YCR035C PUS5Q06244 254 aa8.63□□□□□ -1.03
RRP43YCR035C ADP1P25371 1049 aa8.62□□□□□ -1.03
RRP43YCR035C SIS2P36024 562 aa8.62□□□□□ -1.03
RRP43YCR035C DSF2P38213 736 aa8.62□□□□□ -1.03
RRP43YCR035C EMP47P43555 445 aa8.62□□□□□ -1.03
RRP43YCR035C HDA1P53973 706 aa8.62□□□□□ -1.03
RRP43YCR035C WSC3Q12215 556 aa8.62□□□□□ -1.03
RRP43YCR035C YBL029C-AQ3E756 94 aa8.62□□□□□ -1.03
RRP43YCR035C FLO1P32768 1537 aa8.62□□□□□ -1.03
RRP43YCR035C PMA1P05030 918 aaKnown RBP8.61□□□□□ -1.03
RRP43YCR035C RPL19AP0CX82 189 aaKnown RBP8.61□□□□□ -1.03
RRP43YCR035C RPL19BP0CX83 189 aaPredicted RBP8.61□□□□□ -1.03
RRP43YCR035C FBP26P32604 452 aa8.61□□□□□ -1.03
RRP43YCR035C MYO3P36006 1272 aa8.61□□□□□ -1.03
RRP43YCR035C NIT1P40447 199 aa8.61□□□□□ -1.03
RRP43YCR035C VNX1P42839 908 aa8.61□□□□□ -1.03
RRP43YCR035C PTK2P47116 818 aaKnown RBP8.61□□□□□ -1.03
RRP43YCR035C ENT3P47160 408 aa8.61□□□□□ -1.03
RRP43YCR035C YDL124WQ07551 312 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 88.1 ms