RNA–Protein interactions for RNA: YBR089C-A

NHP6B, Transcript of High-mobility group (HMG) protein, yeastyeast

Gene NHP6B, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NHP6BYBR089C-A SIC1P38634 284 aa6.54□□□□□ -1.36
NHP6BYBR089C-A CIC1P38779 376 aaKnown RBP6.54□□□□□ -1.36
NHP6BYBR089C-A SET1P38827 1080 aaKnown RBP6.54□□□□□ -1.36
NHP6BYBR089C-A CCC2P38995 1004 aa6.54□□□□□ -1.36
NHP6BYBR089C-A PRP3Q03338 469 aaPredicted RBP6.54□□□□□ -1.36
NHP6BYBR089C-A ATG9Q12142 997 aa6.54□□□□□ -1.36
NHP6BYBR089C-A CDC15P27636 974 aa6.53□□□□□ -1.36
NHP6BYBR089C-A SWI3P32591 825 aa6.53□□□□□ -1.36
NHP6BYBR089C-A RGD1P38339 666 aa6.53□□□□□ -1.36
NHP6BYBR089C-A VPS8P39702 1274 aa6.53□□□□□ -1.36
NHP6BYBR089C-A FAR11P53917 953 aa6.53□□□□□ -1.36
NHP6BYBR089C-A VTC3Q02725 835 aa6.53□□□□□ -1.36
NHP6BYBR089C-A RPN7Q06103 429 aaKnown RBP6.53□□□□□ -1.36
NHP6BYBR089C-A OMS1Q06668 471 aa6.53□□□□□ -1.36
NHP6BYBR089C-A PGA3Q12746 312 aaKnown RBP6.53□□□□□ -1.36
NHP6BYBR089C-A PDC1P06169 563 aaKnown RBP6.52□□□□□ -1.37
NHP6BYBR089C-A PEP3P27801 918 aa6.52□□□□□ -1.37
NHP6BYBR089C-A NFU1P32860 256 aa6.52□□□□□ -1.37
NHP6BYBR089C-A SAP190P36123 1033 aa6.52□□□□□ -1.37
NHP6BYBR089C-A RCR1P38212 213 aa6.52□□□□□ -1.37
NHP6BYBR089C-A BUD16P39988 312 aa6.52□□□□□ -1.37
NHP6BYBR089C-A VPS38Q05919 439 aa6.52□□□□□ -1.37
NHP6BYBR089C-A TMA16Q08687 178 aa6.52□□□□□ -1.37
NHP6BYBR089C-A SLM3Q12093 417 aa6.52□□□□□ -1.37
NHP6BYBR089C-A YRF1-2P40105 1681 aa6.52□□□□□ -1.37
NHP6BYBR089C-A ARD1P07347 238 aaPredicted RBP6.51□□□□□ -1.37
NHP6BYBR089C-A CBP3P21560 335 aa6.51□□□□□ -1.37
NHP6BYBR089C-A MCM4P30665 933 aaKnown RBP6.51□□□□□ -1.37
NHP6BYBR089C-A STO1P34160 861 aaKnown RBP6.51□□□□□ -1.37
NHP6BYBR089C-A ADE17P38009 592 aaKnown RBP6.51□□□□□ -1.37
NHP6BYBR089C-A VNX1P42839 908 aa6.51□□□□□ -1.37
NHP6BYBR089C-A BOP3P53958 396 aa6.51□□□□□ -1.37
NHP6BYBR089C-A MEC3Q02574 474 aa6.51□□□□□ -1.37
NHP6BYBR089C-A INP54Q08227 384 aaKnown RBP6.51□□□□□ -1.37
NHP6BYBR089C-A YOR238WQ08634 303 aa6.51□□□□□ -1.37
NHP6BYBR089C-A MPH3P0CE00 602 aa6.5□□□□□ -1.37
NHP6BYBR089C-A PSE1P32337 1089 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A SWH1P35845 1188 aa6.5□□□□□ -1.37
NHP6BYBR089C-A EFM2P38347 419 aa6.5□□□□□ -1.37
NHP6BYBR089C-A RIO2P40160 425 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A HUL4P40985 892 aa6.5□□□□□ -1.37
NHP6BYBR089C-A YNL035CP53962 389 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A HCR1Q05775 265 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A ALE1Q08548 619 aa6.5□□□□□ -1.37
NHP6BYBR089C-A YPL225WQ08971 146 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A RUD3Q12234 484 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A OSH2Q12451 1283 aa6.5□□□□□ -1.37
NHP6BYBR089C-A TY1B-NL2Q99337 1749 aaKnown RBP6.5□□□□□ -1.37
NHP6BYBR089C-A HXK1P04806 485 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A SUP35P05453 685 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A SEC23P15303 768 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A PRP5P21372 849 aaPredicted RBP6.49□□□□□ -1.37
NHP6BYBR089C-A MSH3P25336 1018 aa6.49□□□□□ -1.37
NHP6BYBR089C-A MIF2P35201 549 aa6.49□□□□□ -1.37
NHP6BYBR089C-A MGA2P40578 1113 aa6.49□□□□□ -1.37
NHP6BYBR089C-A HXT10P43581 546 aa6.49□□□□□ -1.37
NHP6BYBR089C-A CUE3P53137 624 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A MTC5Q03897 1148 aa6.49□□□□□ -1.37
NHP6BYBR089C-A GFD1Q04839 188 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A ESF1Q06344 628 aaKnown RBP6.49□□□□□ -1.37
NHP6BYBR089C-A ATG23Q06671 453 aa6.49□□□□□ -1.37
NHP6BYBR089C-A VAC14Q06708 880 aa6.49□□□□□ -1.37
NHP6BYBR089C-A GYP5Q12344 894 aa6.49□□□□□ -1.37
NHP6BYBR089C-A SEC39Q12745 709 aa6.49□□□□□ -1.37
NHP6BYBR089C-A RRP43P25359 394 aaPredicted RBP6.48□□□□□ -1.37
NHP6BYBR089C-A CNS1P33313 385 aa6.48□□□□□ -1.37
NHP6BYBR089C-A MCX1P38323 520 aaPredicted RBP6.48□□□□□ -1.37
NHP6BYBR089C-A SPT8P38915 602 aa6.48□□□□□ -1.37
NHP6BYBR089C-A PXA1P41909 870 aa6.48□□□□□ -1.37
NHP6BYBR089C-A PKH3Q03306 898 aaPredicted RBP6.48□□□□□ -1.37
NHP6BYBR089C-A SFH1Q06168 426 aa6.48□□□□□ -1.37
NHP6BYBR089C-A NOP6Q07623 225 aaKnown RBP6.48□□□□□ -1.37
NHP6BYBR089C-A HSP82P02829 709 aaKnown RBP6.47□□□□□ -1.37
NHP6BYBR089C-A DIT2P21595 489 aa6.47□□□□□ -1.37
NHP6BYBR089C-A IMP2'P32351 346 aa6.47□□□□□ -1.37
NHP6BYBR089C-A SKI2P35207 1287 aaKnown RBP RIP-Chip data6.47□□□□□ -1.37not detected
NHP6BYBR089C-A YSW1P38280 609 aa6.47□□□□□ -1.37
NHP6BYBR089C-A SEC9P40357 651 aa6.47□□□□□ -1.37
NHP6BYBR089C-A FYV8P46949 817 aaKnown RBP6.47□□□□□ -1.37
NHP6BYBR089C-A YJR079WP47126 109 aa6.47□□□□□ -1.37
NHP6BYBR089C-A STE23Q06010 1027 aa6.47□□□□□ -1.37
NHP6BYBR089C-A YLR271WQ06152 274 aa6.47□□□□□ -1.37
NHP6BYBR089C-A YOR223WQ12015 292 aa6.47□□□□□ -1.37
NHP6BYBR089C-A NUR1Q12066 484 aa6.47□□□□□ -1.37
NHP6BYBR089C-A SSF2Q12153 453 aaPredicted RBP6.47□□□□□ -1.37
NHP6BYBR089C-A PUS1Q12211 544 aaKnown RBP6.47□□□□□ -1.37
NHP6BYBR089C-A RRP5Q05022 1729 aaKnown RBP6.47□□□□□ -1.37
NHP6BYBR089C-A URB1P34241 1764 aaKnown RBP6.46□□□□□ -1.37
NHP6BYBR089C-A BNI1P41832 1953 aa6.46□□□□□ -1.37
NHP6BYBR089C-A RGP1P16664 663 aa6.46□□□□□ -1.38
NHP6BYBR089C-A PFK2P16862 959 aaKnown RBP RIP-Chip data6.46□□□□□ -1.38not detected
NHP6BYBR089C-A SEC18P18759 758 aaKnown RBP6.46□□□□□ -1.38
NHP6BYBR089C-A CRG1P38892 291 aaRIP-Chip data6.46□□□□□ -1.38not detected
NHP6BYBR089C-A EFM4P40516 257 aa6.46□□□□□ -1.38
NHP6BYBR089C-A XKS1P42826 600 aa6.46□□□□□ -1.38
NHP6BYBR089C-A ALD3P54114 506 aa6.46□□□□□ -1.38
NHP6BYBR089C-A HMI1Q12039 706 aa6.46□□□□□ -1.38
NHP6BYBR089C-A DCS2Q12123 353 aa6.46□□□□□ -1.38
NHP6BYBR089C-A SSK22P25390 1331 aaPredicted RBP6.46□□□□□ -1.38
NHP6BYBR089C-A SAC3P46674 1301 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms