RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W CLB1P24868 471 aa7.34□□□□□ -1.23
GEF1YJR040W SWC3P31376 625 aa7.34□□□□□ -1.23
GEF1YJR040W SIC1P38634 284 aa7.34□□□□□ -1.23
GEF1YJR040W RVS167P39743 482 aaKnown RBP7.34□□□□□ -1.23
GEF1YJR040W CIR1P42940 261 aa7.34□□□□□ -1.23
GEF1YJR040W VPS60Q03390 229 aa7.34□□□□□ -1.23
GEF1YJR040W NCB2Q92317 146 aa7.34□□□□□ -1.23
GEF1YJR040W NOP14Q99207 810 aaKnown RBP7.34□□□□□ -1.23
GEF1YJR040W SPT2P06843 333 aaPredicted RBP7.34□□□□□ -1.23
GEF1YJR040W BDH2P39713 417 aa7.34□□□□□ -1.23
GEF1YJR040W UTP13Q05946 817 aaKnown RBP7.34□□□□□ -1.23
GEF1YJR040W RNR2P09938 399 aaKnown RBP7.33□□□□□ -1.24
GEF1YJR040W BIK1P11709 440 aa7.33□□□□□ -1.24
GEF1YJR040W DEP1P31385 405 aa7.33□□□□□ -1.24
GEF1YJR040W PFF1P38244 976 aa7.33□□□□□ -1.24
GEF1YJR040W BDF2Q07442 638 aa7.33□□□□□ -1.24
GEF1YJR040W MSH3P25336 1018 aa7.33□□□□□ -1.24
GEF1YJR040W RPN12P32496 274 aa7.33□□□□□ -1.24
GEF1YJR040W RMD1Q03441 430 aa7.33□□□□□ -1.24
GEF1YJR040W HST1P53685 503 aa7.32□□□□□ -1.24
GEF1YJR040W SYF1Q04048 859 aaPredicted RBP7.32□□□□□ -1.24
GEF1YJR040W HRQ1Q05549 1077 aa7.32□□□□□ -1.24
GEF1YJR040W APC11Q12157 165 aa7.32□□□□□ -1.24
GEF1YJR040W DID4P36108 232 aa7.32□□□□□ -1.24
GEF1YJR040W MIC60P36112 540 aa7.32□□□□□ -1.24
GEF1YJR040W RIX7Q07844 837 aaKnown RBP7.32□□□□□ -1.24
GEF1YJR040W TRL1P09880 827 aaKnown RBP7.31□□□□□ -1.24
GEF1YJR040W SFI1Q12369 946 aa7.31□□□□□ -1.24
GEF1YJR040W SNU66Q12420 587 aaPredicted RBP7.31□□□□□ -1.24
GEF1YJR040W CDC16P09798 840 aa7.3□□□□□ -1.24
GEF1YJR040W SIT4P20604 311 aa7.3□□□□□ -1.24
GEF1YJR040W YKL222CP35995 705 aa7.3□□□□□ -1.24
GEF1YJR040W FCP1Q03254 732 aa7.3□□□□□ -1.24
GEF1YJR040W IRC3Q06683 689 aa7.3□□□□□ -1.24
GEF1YJR040W CTI6Q08923 506 aa7.3□□□□□ -1.24
GEF1YJR040W ERT1P38140 529 aa7.3□□□□□ -1.24
GEF1YJR040W RSM25P40496 264 aa7.3□□□□□ -1.24
GEF1YJR040W RPS9BP05755 195 aaKnown RBP7.29□□□□□ -1.24
GEF1YJR040W MSH4P40965 878 aaPredicted RBP7.29□□□□□ -1.24
GEF1YJR040W ERO1Q03103 563 aa7.29□□□□□ -1.24
GEF1YJR040W PRP3Q03338 469 aaPredicted RBP7.29□□□□□ -1.24
GEF1YJR040W UBP16Q02863 499 aa7.29□□□□□ -1.24
GEF1YJR040W UBX2Q04228 584 aa7.29□□□□□ -1.24
GEF1YJR040W GYP5Q12344 894 aa7.29□□□□□ -1.24
GEF1YJR040W DPH6Q12429 685 aa7.29□□□□□ -1.24
GEF1YJR040W ADR1P07248 1323 aa7.29□□□□□ -1.24
GEF1YJR040W KEX1P09620 729 aa7.28□□□□□ -1.24
GEF1YJR040W STU2P46675 888 aa7.28□□□□□ -1.24
GEF1YJR040W DOS2P54858 310 aa7.28□□□□□ -1.24
GEF1YJR040W MSN5P52918 1224 aa7.28□□□□□ -1.24
GEF1YJR040W CWH41P53008 833 aa7.28□□□□□ -1.24
GEF1YJR040W MLC1P53141 149 aa7.28□□□□□ -1.24
GEF1YJR040W RNT1Q02555 471 aa7.28□□□□□ -1.24
GEF1YJR040W CTT1P06115 562 aa7.27□□□□□ -1.25
GEF1YJR040W CYC8P14922 966 aa7.27□□□□□ -1.25
GEF1YJR040W POM152P39685 1337 aa7.27□□□□□ -1.25
GEF1YJR040W PIF1P07271 859 aa7.27□□□□□ -1.25
GEF1YJR040W KRE33P53914 1056 aaKnown RBP7.27□□□□□ -1.25
GEF1YJR040W RPN7Q06103 429 aaKnown RBP7.27□□□□□ -1.25
GEF1YJR040W YGL242CP53066 181 aa7.26□□□□□ -1.25
GEF1YJR040W YNL011CP53980 444 aa7.26□□□□□ -1.25
GEF1YJR040W PDR18P53756 1333 aa7.26□□□□□ -1.25
GEF1YJR040W MFT1P33441 392 aaKnown RBP7.26□□□□□ -1.25
GEF1YJR040W ECM21P38167 1117 aaKnown RBP7.26□□□□□ -1.25
GEF1YJR040W ENT3P47160 408 aa7.26□□□□□ -1.25
GEF1YJR040W VPS4P52917 437 aa7.26□□□□□ -1.25
GEF1YJR040W YGL140CP53120 1219 aa7.26□□□□□ -1.25
GEF1YJR040W SSL2Q00578 843 aa7.26□□□□□ -1.25
GEF1YJR040W PEX19Q07418 342 aa7.26□□□□□ -1.25
GEF1YJR040W GRX6Q12438 231 aa7.26□□□□□ -1.25
GEF1YJR040W FIG2P25653 1609 aa7.25□□□□□ -1.25
GEF1YJR040W BYE1P36106 594 aa7.25□□□□□ -1.25
GEF1YJR040W SAS4Q04003 481 aa7.25□□□□□ -1.25
GEF1YJR040W BRE1Q07457 700 aaKnown RBP7.25□□□□□ -1.25
GEF1YJR040W PSF3Q12146 194 aa7.25□□□□□ -1.25
GEF1YJR040W PBY1P38254 753 aa7.24□□□□□ -1.25
GEF1YJR040W OSH3P38713 996 aaKnown RBP7.24□□□□□ -1.25
GEF1YJR040W ICP55P40051 511 aa7.24□□□□□ -1.25
GEF1YJR040W CEP3P40969 608 aa7.24□□□□□ -1.25
GEF1YJR040W TIM50Q02776 476 aa7.24□□□□□ -1.25
GEF1YJR040W YMR102CQ03177 834 aa7.24□□□□□ -1.25
GEF1YJR040W SRC1Q03707 834 aa7.24□□□□□ -1.25
GEF1YJR040W RIM20Q12033 661 aa7.24□□□□□ -1.25
GEF1YJR040W RPL19AP0CX82 189 aaKnown RBP7.24□□□□□ -1.25
GEF1YJR040W RPL19BP0CX83 189 aaPredicted RBP7.24□□□□□ -1.25
GEF1YJR040W HYR1P40581 163 aaKnown RBP7.24□□□□□ -1.25
GEF1YJR040W HXT10P43581 546 aa7.24□□□□□ -1.25
GEF1YJR040W TSR3Q12094 313 aaKnown RBP7.24□□□□□ -1.25
GEF1YJR040W YOL087CQ99247 1116 aa7.24□□□□□ -1.25
GEF1YJR040W SEC18P18759 758 aaKnown RBP7.23□□□□□ -1.25
GEF1YJR040W SMY1P32364 656 aaKnown RBP7.23□□□□□ -1.25
GEF1YJR040W RIM101P33400 625 aa7.23□□□□□ -1.25
GEF1YJR040W NPL4P33755 580 aa7.23□□□□□ -1.25
GEF1YJR040W MNR2P35724 969 aa7.23□□□□□ -1.25
GEF1YJR040W MRPL10P36520 322 aa7.23□□□□□ -1.25
GEF1YJR040W FRD1P32614 470 aaKnown RBP7.23□□□□□ -1.25
GEF1YJR040W AAP1P37898 856 aaKnown RBP7.23□□□□□ -1.25
GEF1YJR040W SML1Q04964 104 aa7.23□□□□□ -1.25
GEF1YJR040W TRS33Q99394 268 aa7.23□□□□□ -1.25
GEF1YJR040W SES1P07284 462 aaKnown RBP7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms