RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W UBP12P39538 1254 aa8.39□□□□□ -1.07
SNU71YGR013W YNL011CP53980 444 aa8.39□□□□□ -1.07
SNU71YGR013W SAM37P50110 327 aa8.38□□□□□ -1.07
SNU71YGR013W OXR1Q08952 273 aa8.38□□□□□ -1.07
SNU71YGR013W HXK1P04806 485 aaKnown RBP8.37□□□□□ -1.07
SNU71YGR013W TIM23P32897 222 aa8.37□□□□□ -1.07
SNU71YGR013W FAA3P39002 694 aa8.37□□□□□ -1.07
SNU71YGR013W GDE1Q02979 1223 aa8.37□□□□□ -1.07
SNU71YGR013W SWI5P08153 709 aa8.36□□□□□ -1.07
SNU71YGR013W RAD4P14736 754 aa8.36□□□□□ -1.07
SNU71YGR013W FAA4P47912 694 aaKnown RBP8.36□□□□□ -1.07
SNU71YGR013W SUT1P53032 299 aaKnown RBP8.36□□□□□ -1.07
SNU71YGR013W UTP14Q04500 899 aaKnown RBP8.36□□□□□ -1.07
SNU71YGR013W ATG20Q07528 640 aa8.36□□□□□ -1.07
SNU71YGR013W WSC3Q12215 556 aa8.36□□□□□ -1.07
SNU71YGR013W MSH4P40965 878 aaPredicted RBP8.36□□□□□ -1.07
SNU71YGR013W BUD4P47136 1447 aa8.35□□□□□ -1.07
SNU71YGR013W YEN1P40028 759 aa8.35□□□□□ -1.07
SNU71YGR013W HXT10P43581 546 aa8.35□□□□□ -1.07
SNU71YGR013W KXD1P53158 218 aa8.35□□□□□ -1.07
SNU71YGR013W THO2P53552 1597 aaKnown RBP8.35□□□□□ -1.07
SNU71YGR013W PRI2P20457 528 aa8.34□□□□□ -1.07
SNU71YGR013W PHO8P11491 566 aa8.34□□□□□ -1.07
SNU71YGR013W NAB3P38996 802 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
SNU71YGR013W NOP2P40991 618 aaKnown RBP8.34□□□□□ -1.07
SNU71YGR013W TIM54P47045 478 aa8.34□□□□□ -1.07
SNU71YGR013W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
SNU71YGR013W CIC1P38779 376 aaKnown RBP8.33□□□□□ -1.08
SNU71YGR013W NOC3Q07896 663 aaPredicted RBP8.33□□□□□ -1.08
SNU71YGR013W GIN4Q12263 1142 aa8.33□□□□□ -1.08
SNU71YGR013W TDA5Q06417 326 aaKnown RBP8.32□□□□□ -1.08
SNU71YGR013W YHR020WP38708 688 aaKnown RBP8.32□□□□□ -1.08
SNU71YGR013W YHL008CP38750 627 aa8.32□□□□□ -1.08
SNU71YGR013W SPF1P39986 1215 aaKnown RBP8.32□□□□□ -1.08
SNU71YGR013W NAN1Q02931 896 aaKnown RBP8.32□□□□□ -1.08
SNU71YGR013W BUD20Q08004 166 aaPredicted RBP8.32□□□□□ -1.08
SNU71YGR013W CDC34P14682 295 aa8.31□□□□□ -1.08
SNU71YGR013W OPI10Q08202 246 aa8.31□□□□□ -1.08
SNU71YGR013W ZDS1P50111 915 aaKnown RBP8.3□□□□□ -1.08
SNU71YGR013W YKL069WP36088 180 aa8.3□□□□□ -1.08
SNU71YGR013W GRX7P38068 203 aa8.3□□□□□ -1.08
SNU71YGR013W ENP1P38333 483 aaKnown RBP8.3□□□□□ -1.08
SNU71YGR013W HXT5P38695 592 aa8.3□□□□□ -1.08
SNU71YGR013W CHZ1P40019 153 aaPredicted RBP8.3□□□□□ -1.08
SNU71YGR013W YGR053CP53234 283 aa8.3□□□□□ -1.08
SNU71YGR013W DNM1P54861 757 aa8.3□□□□□ -1.08
SNU71YGR013W RSC4Q02206 625 aa8.3□□□□□ -1.08
SNU71YGR013W ELP4Q02884 456 aaKnown RBP8.3□□□□□ -1.08
SNU71YGR013W YLR125WQ12138 136 aa8.3□□□□□ -1.08
SNU71YGR013W MRPL33P20084 86 aa8.29□□□□□ -1.08
SNU71YGR013W DUT1P33317 147 aa8.29□□□□□ -1.08
SNU71YGR013W TYW3P53177 273 aa8.29□□□□□ -1.08
SNU71YGR013W BSC2Q05611 235 aa8.29□□□□□ -1.08
SNU71YGR013W XRN1P22147 1528 aaKnown RBP8.29□□□□□ -1.08
SNU71YGR013W SRM1P21827 482 aa8.28□□□□□ -1.08
SNU71YGR013W PRE9P23638 258 aaKnown RBP8.28□□□□□ -1.08
SNU71YGR013W TPD3P31383 635 aa8.28□□□□□ -1.08
SNU71YGR013W CRP1P38845 465 aaKnown RBP8.28□□□□□ -1.08
SNU71YGR013W RRD1P40454 393 aaKnown RBP8.28□□□□□ -1.08
SNU71YGR013W MRPS18P42847 217 aa8.28□□□□□ -1.08
SNU71YGR013W DAL4Q04895 635 aa8.28□□□□□ -1.08
SNU71YGR013W RRN7P40992 514 aa8.28□□□□□ -1.08
SNU71YGR013W THI4P32318 326 aa8.27□□□□□ -1.09
SNU71YGR013W FLC1Q08967 793 aa8.27□□□□□ -1.09
SNU71YGR013W MCD1Q12158 566 aa8.26□□□□□ -1.09
SNU71YGR013W ERR1P0CX10 437 aa8.26□□□□□ -1.09
SNU71YGR013W ERR2P0CX11 437 aa8.26□□□□□ -1.09
SNU71YGR013W UTR2P32623 467 aa8.26□□□□□ -1.09
SNU71YGR013W SMC1P32908 1225 aa8.26□□□□□ -1.09
SNU71YGR013W RSP5P39940 809 aaKnown RBP8.26□□□□□ -1.09
SNU71YGR013W NOP14Q99207 810 aaKnown RBP8.26□□□□□ -1.09
SNU71YGR013W SEC6P32844 805 aa8.25□□□□□ -1.09
SNU71YGR013W INP54Q08227 384 aaKnown RBP8.25□□□□□ -1.09
SNU71YGR013W MDS3P53094 1487 aa8.25□□□□□ -1.09
SNU71YGR013W CCP1P00431 361 aa8.24□□□□□ -1.09
SNU71YGR013W HXT8P40886 569 aa8.24□□□□□ -1.09
SNU71YGR013W KIP2P28743 706 aa8.23□□□□□ -1.09
SNU71YGR013W ULI1P43604 169 aa8.23□□□□□ -1.09
SNU71YGR013W FOL1P53848 824 aa8.23□□□□□ -1.09
SNU71YGR013W SSN2P38931 1420 aa8.23□□□□□ -1.09
SNU71YGR013W PEP1P32319 1579 aa8.22□□□□□ -1.09
SNU71YGR013W PRP40P33203 583 aaKnown RBP8.22□□□□□ -1.09
SNU71YGR013W YNR029CP53729 429 aaKnown RBP8.22□□□□□ -1.09
SNU71YGR013W YNL035CP53962 389 aaKnown RBP8.22□□□□□ -1.09
SNU71YGR013W HAP5Q02516 242 aa8.22□□□□□ -1.09
SNU71YGR013W ISU1Q03020 165 aa8.22□□□□□ -1.09
SNU71YGR013W VMA3P25515 160 aa8.21□□□□□ -1.09
SNU71YGR013W YCS4Q06156 1176 aa8.21□□□□□ -1.09
SNU71YGR013W FAL1Q12099 399 aaKnown RBP8.21□□□□□ -1.09
SNU71YGR013W UGA4P32837 571 aa8.21□□□□□ -1.1
SNU71YGR013W ITC1P53125 1264 aa8.21□□□□□ -1.1
SNU71YGR013W APP1P53933 587 aa8.21□□□□□ -1.1
SNU71YGR013W ECM16Q04217 1267 aaKnown RBP8.21□□□□□ -1.1
SNU71YGR013W YDL121CQ07541 149 aa8.21□□□□□ -1.1
SNU71YGR013W MOD5P07884 428 aa8.2□□□□□ -1.1
SNU71YGR013W PAF1P38351 445 aa8.2□□□□□ -1.1
SNU71YGR013W YJR115WP47152 169 aa8.2□□□□□ -1.1
SNU71YGR013W YGR125WP53273 1036 aa8.2□□□□□ -1.1
SNU71YGR013W YPL109CQ02981 657 aa8.2□□□□□ -1.1
SNU71YGR013W ADR1P07248 1323 aa8.2□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms