RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W DRS1P32892 752 aaKnown RBP15.58■□□□□ 0.08
SNU71YGR013W MTC1P47018 478 aaKnown RBP14.25□□□□□ -0.13
SNU71YGR013W TFA1P36100 482 aa14.08□□□□□ -0.16
SNU71YGR013W BFR2Q06631 534 aaKnown RBP14.02□□□□□ -0.16
SNU71YGR013W RQC2Q12532 1038 aaKnown RBP13.13□□□□□ -0.31
SNU71YGR013W AVT3P36062 692 aa13.04□□□□□ -0.32
SNU71YGR013W DIP2Q12220 943 aaPredicted RBP12.85□□□□□ -0.35
SNU71YGR013W TAF7Q05021 590 aa12.37□□□□□ -0.43
SNU71YGR013W DMA1P38823 416 aa12.1□□□□□ -0.47
SNU71YGR013W RSE1Q04693 1361 aaKnown RBP11.74□□□□□ -0.53
SNU71YGR013W LEO1P38439 464 aa11.66□□□□□ -0.54
SNU71YGR013W PTP3P40048 928 aa11.49□□□□□ -0.57
SNU71YGR013W ISW2Q08773 1120 aa11.26□□□□□ -0.61
SNU71YGR013W RPL17AP05740 184 aaKnown RBP11.25□□□□□ -0.61
SNU71YGR013W RPL17BP46990 184 aaKnown RBP11.25□□□□□ -0.61
SNU71YGR013W LEU3P08638 886 aa11.13□□□□□ -0.63
SNU71YGR013W RPG1P38249 964 aaKnown RBP11.13□□□□□ -0.63
SNU71YGR013W SSP1P38871 571 aa11.12□□□□□ -0.63
SNU71YGR013W RIM101P33400 625 aa11.08□□□□□ -0.64
SNU71YGR013W SAS10Q12136 610 aaPredicted RBP11.04□□□□□ -0.64
SNU71YGR013W SPT21P35209 758 aa10.98□□□□□ -0.65
SNU71YGR013W REB1P21538 810 aa10.95□□□□□ -0.66
SNU71YGR013W DMA2P53924 522 aa10.82□□□□□ -0.68
SNU71YGR013W OXP1P28273 1286 aa10.81□□□□□ -0.68
SNU71YGR013W YAH1Q12184 172 aaKnown RBP10.78□□□□□ -0.68
SNU71YGR013W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.77□□□□□ -0.69not detected
SNU71YGR013W PRI1P10363 409 aa10.74□□□□□ -0.69
SNU71YGR013W YLR271WQ06152 274 aa10.72□□□□□ -0.69
SNU71YGR013W RPN1P38764 993 aaKnown RBP10.7□□□□□ -0.7
SNU71YGR013W ABP1P15891 592 aaKnown RBP10.65□□□□□ -0.7
SNU71YGR013W MGA2P40578 1113 aa10.59□□□□□ -0.71
SNU71YGR013W YIL055CP40523 627 aaKnown RBP10.56□□□□□ -0.72
SNU71YGR013W RLF2Q12495 606 aa10.53□□□□□ -0.72
SNU71YGR013W CST9Q06032 482 aa10.47□□□□□ -0.73
SNU71YGR013W CKB1P43639 278 aa10.42□□□□□ -0.74
SNU71YGR013W RSM7P47150 247 aa10.42□□□□□ -0.74
SNU71YGR013W SPB4P25808 606 aaPredicted RBP10.39□□□□□ -0.75
SNU71YGR013W AAD16Q02895 342 aa10.35□□□□□ -0.75
SNU71YGR013W YKR023WP36119 530 aaKnown RBP10.34□□□□□ -0.75
SNU71YGR013W TSR3Q12094 313 aaKnown RBP10.29□□□□□ -0.76
SNU71YGR013W VPS70P47161 811 aa10.28□□□□□ -0.76
SNU71YGR013W PSD2P53037 1138 aaKnown RBP10.28□□□□□ -0.76
SNU71YGR013W SET1P38827 1080 aaKnown RBP10.27□□□□□ -0.76
SNU71YGR013W YPR148CQ06523 435 aa10.27□□□□□ -0.76
SNU71YGR013W RAM2P29703 316 aa10.24□□□□□ -0.77
SNU71YGR013W FAP1P53971 965 aa10.23□□□□□ -0.77
SNU71YGR013W IFH1P39520 1085 aa10.23□□□□□ -0.77
SNU71YGR013W KIN1P13185 1064 aa10.17□□□□□ -0.78
SNU71YGR013W AI2P03876 854 aa10.16□□□□□ -0.78
SNU71YGR013W DSF2P38213 736 aa10.15□□□□□ -0.79
SNU71YGR013W HOP09932 586 aa10.13□□□□□ -0.79
SNU71YGR013W TFC8Q12308 588 aa10.11□□□□□ -0.79
SNU71YGR013W YNR021WP53723 404 aaKnown RBP10.1□□□□□ -0.79
SNU71YGR013W PBS2P08018 668 aa10.06□□□□□ -0.8
SNU71YGR013W DCD1P06773 312 aa10.04□□□□□ -0.8
SNU71YGR013W GLC3P32775 704 aa10.02□□□□□ -0.81
SNU71YGR013W RCR1P38212 213 aa10.02□□□□□ -0.81
SNU71YGR013W HGH1P48362 394 aaKnown RBP10.02□□□□□ -0.81
SNU71YGR013W AIM7Q12156 149 aa9.98□□□□□ -0.81
SNU71YGR013W YML020WQ03722 664 aa9.98□□□□□ -0.81
SNU71YGR013W GUA1P38625 525 aaKnown RBP9.96□□□□□ -0.82
SNU71YGR013W BBC1P47068 1157 aa9.96□□□□□ -0.82
SNU71YGR013W AIM44Q99299 758 aa9.94□□□□□ -0.82
SNU71YGR013W MRM1P25270 412 aa9.92□□□□□ -0.82
SNU71YGR013W MAK11P20484 414 aaKnown RBP9.91□□□□□ -0.82
SNU71YGR013W MAM3Q12296 706 aa9.91□□□□□ -0.82
SNU71YGR013W NOP8Q08287 484 aaPredicted RBP9.9□□□□□ -0.82
SNU71YGR013W DIT2P21595 489 aa9.89□□□□□ -0.83
SNU71YGR013W IES2P40154 320 aa9.89□□□□□ -0.83
SNU71YGR013W BCH2P36122 765 aa9.88□□□□□ -0.83
SNU71YGR013W NUP42P49686 430 aaKnown RBP9.88□□□□□ -0.83
SNU71YGR013W ORC1P54784 914 aaPredicted RBP9.86□□□□□ -0.83
SNU71YGR013W RTG3P38165 486 aa9.84□□□□□ -0.83
SNU71YGR013W SLX8P40072 274 aa9.83□□□□□ -0.84
SNU71YGR013W CDC27P38042 758 aa9.82□□□□□ -0.84
SNU71YGR013W MRPL32P25348 183 aa9.81□□□□□ -0.84
SNU71YGR013W HPC2Q01448 625 aa9.81□□□□□ -0.84
SNU71YGR013W SSA1P10591 642 aaKnown RBP9.8□□□□□ -0.84
SNU71YGR013W GEF1P37020 779 aa9.79□□□□□ -0.84
SNU71YGR013W REF2P42073 533 aaPredicted RBP9.79□□□□□ -0.84
SNU71YGR013W MAK21Q12176 1025 aaKnown RBP9.79□□□□□ -0.84
SNU71YGR013W COQ8P27697 501 aa9.79□□□□□ -0.84
SNU71YGR013W EPS1P40557 701 aa9.79□□□□□ -0.84
SNU71YGR013W TFB3Q03290 321 aa9.79□□□□□ -0.84
SNU71YGR013W NAP1P25293 417 aaKnown RBP9.78□□□□□ -0.84
SNU71YGR013W SUB2Q07478 446 aaKnown RBP9.77□□□□□ -0.85
SNU71YGR013W ATF2P53296 535 aa9.74□□□□□ -0.85
SNU71YGR013W IOC4Q04213 475 aa9.72□□□□□ -0.85
SNU71YGR013W NOP53Q12080 455 aaKnown RBP9.7□□□□□ -0.86
SNU71YGR013W PKC1P24583 1151 aa9.69□□□□□ -0.86
SNU71YGR013W BDF1P35817 686 aa9.69□□□□□ -0.86
SNU71YGR013W VPS29P38759 282 aa9.68□□□□□ -0.86
SNU71YGR013W COX6P00427 148 aa9.67□□□□□ -0.86
SNU71YGR013W BRL1P38770 471 aa9.65□□□□□ -0.86
SNU71YGR013W GLN1P32288 370 aaKnown RBP9.62□□□□□ -0.87
SNU71YGR013W EDS1P38073 919 aa9.62□□□□□ -0.87
SNU71YGR013W BIM1P40013 344 aa9.62□□□□□ -0.87
SNU71YGR013W MIF2P35201 549 aa9.6□□□□□ -0.87
SNU71YGR013W MRX12P47084 519 aa9.59□□□□□ -0.87
SNU71YGR013W ATG32P40458 529 aa9.58□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms