Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 NSR1YGR159C 1245 nt19.18■□□□□ 0.66
RSP5P39940 YML009W-BYML009W-B 477 nt19.08■□□□□ 0.64
RSP5P39940 NOP1YDL014W 984 nt18.36■□□□□ 0.53
RSP5P39940 MDJ1YFL016C 1536 nt17.43■□□□□ 0.38
RSP5P39940 YKL036CYKL036C 393 nt16.62■□□□□ 0.25
RSP5P39940 YJL027CYJL027C 417 nt16.04■□□□□ 0.16
RSP5P39940 SRX1YKL086W 384 nt16.01■□□□□ 0.15
RSP5P39940 Q0297Q0297 156 nt15.91■□□□□ 0.14
RSP5P39940 YCR051WYCR051W 669 nt15.26■□□□□ 0.03
RSP5P39940 DBP2YNL112W 1641 nt15.21■□□□□ 0.03
RSP5P39940 SCS3YGL126W 1143 nt14.95□□□□□ -0.02
RSP5P39940 YBR190WYBR190W 312 nt14.89□□□□□ -0.03
RSP5P39940 TRN1tP(UGG)A 72 nt14.68□□□□□ -0.06
RSP5P39940 SUF9tP(UGG)F 72 nt14.68□□□□□ -0.06
RSP5P39940 SUF8tP(UGG)H 72 nt14.68□□□□□ -0.06
RSP5P39940 tP(UGG)LtP(UGG)L 72 nt14.68□□□□□ -0.06
RSP5P39940 SUF7tP(UGG)M 72 nt14.68□□□□□ -0.06
RSP5P39940 tP(UGG)N1tP(UGG)N1 72 nt14.68□□□□□ -0.06
RSP5P39940 tP(UGG)N2tP(UGG)N2 72 nt14.68□□□□□ -0.06
RSP5P39940 tP(UGG)O1tP(UGG)O1 72 nt14.68□□□□□ -0.06
RSP5P39940 SUF11tP(UGG)O2 72 nt14.68□□□□□ -0.06
RSP5P39940 CCC1YLR220W 969 nt14.65□□□□□ -0.06
RSP5P39940 RTC3YHR087W 336 nt14.64□□□□□ -0.07
RSP5P39940 Q0182Q0182 405 nt14.63□□□□□ -0.07
RSP5P39940 YOL085CYOL085C 342 nt14.41□□□□□ -0.1
RSP5P39940 RPP1BYDL130W 321 nt14.31□□□□□ -0.12
RSP5P39940 PKP1YIL042C 1185 nt14.3□□□□□ -0.12
RSP5P39940 RVS167YDR388W 1449 nt14.27□□□□□ -0.12
RSP5P39940 MOT3YMR070W 1473 nt14.21□□□□□ -0.13
RSP5P39940 SCJ1YMR214W 1134 nt14.11□□□□□ -0.15
RSP5P39940 tP(UGG)O3tP(UGG)O3 72 nt13.81□□□□□ -0.2
RSP5P39940 PUT4YOR348C 1884 nt13.78□□□□□ -0.2
RSP5P39940 PET122YER153C 765 nt13.74□□□□□ -0.21
RSP5P39940 SHR5YOL110W 714 nt13.66□□□□□ -0.22
RSP5P39940 SSA3YBL075C 1950 nt13.65□□□□□ -0.22
RSP5P39940 URN1YPR152C 1398 nt13.54□□□□□ -0.24
RSP5P39940 SCR1SCR1 522 nt13.51□□□□□ -0.25
RSP5P39940 DEP1YAL013W 1218 nt13.48□□□□□ -0.25
RSP5P39940 ARE1YCR048W 1833 nt13.43□□□□□ -0.26
RSP5P39940 SAH1YER043C 1350 nt13.42□□□□□ -0.26
RSP5P39940 POA1YBR022W 534 nt13.39□□□□□ -0.27
RSP5P39940 OPI9YLR338W 858 nt13.36□□□□□ -0.27
RSP5P39940 RRN5YLR141W 1092 nt13.32□□□□□ -0.28
RSP5P39940 YDJ1YNL064C 1230 nt13.31□□□□□ -0.28
RSP5P39940 YHR049C-AYHR049C-A 297 nt13.3□□□□□ -0.28
RSP5P39940 ATS1YAL020C 1002 nt13.27□□□□□ -0.29
RSP5P39940 RPN10YHR200W 807 nt13.24□□□□□ -0.29
RSP5P39940 GAR1YHR089C 618 nt13.17□□□□□ -0.3
RSP5P39940 YNL208WYNL208W 600 nt13.16□□□□□ -0.3
RSP5P39940 BSC6YOL137W 1494 nt13.13□□□□□ -0.31
RSP5P39940 YER088W-BYER088W-B 147 nt13.03□□□□□ -0.32
RSP5P39940 BUD23YCR047C 828 nt13.02□□□□□ -0.33
RSP5P39940 PUN1YLR414C 792 nt12.98□□□□□ -0.33
RSP5P39940 RSB1YOR049C 1065 nt12.97□□□□□ -0.33
RSP5P39940 PTC2YER089C 1395 nt12.93□□□□□ -0.34
RSP5P39940 YJR018WYJR018W 363 nt12.88□□□□□ -0.35
RSP5P39940 NAB2YGL122C 1578 nt12.77□□□□□ -0.37
RSP5P39940 TIR1YER011W 765 nt12.7□□□□□ -0.38
RSP5P39940 SPT5YML010W 3192 nt12.64□□□□□ -0.39
RSP5P39940 SSA1YAL005C 1929 nt12.62□□□□□ -0.39
RSP5P39940 FPR4YLR449W 1179 nt12.6□□□□□ -0.39
RSP5P39940 YJR120WYJR120W 351 nt12.56□□□□□ -0.4
RSP5P39940 RPP2BYDR382W 333 nt12.54□□□□□ -0.4
RSP5P39940 DAL1YIR027C 1383 nt12.54□□□□□ -0.4
RSP5P39940 FIS1YIL065C 468 nt12.53□□□□□ -0.4
RSP5P39940 INM2YDR287W 879 nt12.44□□□□□ -0.42
RSP5P39940 PHO4YFR034C 939 nt12.42□□□□□ -0.42
RSP5P39940 SSA4YER103W 1929 nt12.42□□□□□ -0.42
RSP5P39940 SRB2YHR041C 633 nt12.34□□□□□ -0.43
RSP5P39940 MEP2YNL142W 1500 nt12.33□□□□□ -0.44
RSP5P39940 PST2YDR032C 597 nt12.32□□□□□ -0.44
RSP5P39940 YBL100CYBL100C 315 nt12.29□□□□□ -0.44
RSP5P39940 YPS1YLR120C 1710 nt12.28□□□□□ -0.44
RSP5P39940 YHR165W-AYHR165W-A 312 nt12.24□□□□□ -0.45
RSP5P39940 BDH2YAL061W 1254 nt12.19□□□□□ -0.46
RSP5P39940 DCW1YKL046C 1350 nt12.18□□□□□ -0.46
RSP5P39940 YDR095CYDR095C 411 nt12.14□□□□□ -0.47
RSP5P39940 FUN26YAL022C 1554 nt12.13□□□□□ -0.47
RSP5P39940 WWM1YFL010C 636 nt12.1□□□□□ -0.47
RSP5P39940 TRM9YML014W 840 nt12.07□□□□□ -0.48
RSP5P39940 ALF1YNL148C 765 nt12.07□□□□□ -0.48
RSP5P39940 EMI2YDR516C 1503 nt12□□□□□ -0.49
RSP5P39940 LSM3YLR438C-A 270 nt11.95□□□□□ -0.5
RSP5P39940 YMR090WYMR090W 684 nt11.95□□□□□ -0.5
RSP5P39940 SHU1YHL006C 453 nt11.94□□□□□ -0.5
RSP5P39940 RPP2AYOL039W 321 nt11.94□□□□□ -0.5
RSP5P39940 YAL037C-BYAL037C-B 975 nt11.93□□□□□ -0.5
RSP5P39940 BDF1YLR399C 2061 nt11.93□□□□□ -0.5
RSP5P39940 CAC2YML102W 1407 nt11.9□□□□□ -0.5
RSP5P39940 CCT6YDR188W 1641 nt11.89□□□□□ -0.51
RSP5P39940 PTP1YDL230W 1008 nt11.89□□□□□ -0.51
RSP5P39940 YGR021WYGR021W 873 nt11.88□□□□□ -0.51
RSP5P39940 YDL221WYDL221W 552 nt11.86□□□□□ -0.51
RSP5P39940 YFL021C-AYFL021C-A 855 nt11.86□□□□□ -0.51
RSP5P39940 SUF2tP(AGG)C 72 nt11.86□□□□□ -0.51
RSP5P39940 SUF10tP(AGG)N 72 nt11.86□□□□□ -0.51
RSP5P39940 YBR220CYBR220C 1683 nt11.84□□□□□ -0.51
RSP5P39940 HOM6YJR139C 1080 nt11.82□□□□□ -0.52
RSP5P39940 SIS1YNL007C 1059 nt11.81□□□□□ -0.52
RSP5P39940 MNP1YGL068W 585 nt11.77□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms