RNA–Protein interactions for RNA: ENST00000462580.1

TUBGCP3-203, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-203ENST00000462580 ZMYND10O75800 440 aa9.6□□□□□ -0.87
TUBGCP3-203ENST00000462580 PSEN2P49810 448 aa9.6□□□□□ -0.87
TUBGCP3-203ENST00000462580 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
TUBGCP3-203ENST00000462580 FGD6Q6ZV73 1430 aa9.59□□□□□ -0.87
TUBGCP3-203ENST00000462580 FECHP22830 423 aa9.59□□□□□ -0.87
TUBGCP3-203ENST00000462580 CDK11AQ9UQ88 783 aaPredicted RBP9.59□□□□□ -0.87
TUBGCP3-203ENST00000462580 RRBP1Q9P2E9 1410 aaKnown RBP9.58□□□□□ -0.88
TUBGCP3-203ENST00000462580 PTPREP23469 700 aa9.58□□□□□ -0.88
TUBGCP3-203ENST00000462580 KCNK17Q96T54 332 aa9.58□□□□□ -0.88
TUBGCP3-203ENST00000462580 CCNB3Q8WWL7 1395 aa9.58□□□□□ -0.88
TUBGCP3-203ENST00000462580 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
TUBGCP3-203ENST00000462580 ARHGAP33O14559 1287 aa9.57□□□□□ -0.88
TUBGCP3-203ENST00000462580 FCHSD2O94868 740 aa9.57□□□□□ -0.88
TUBGCP3-203ENST00000462580 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
TUBGCP3-203ENST00000462580 POTEGQ6S5H5 508 aa9.57□□□□□ -0.88
TUBGCP3-203ENST00000462580 CAMSAP2Q08AD1 1489 aa9.57□□□□□ -0.88
TUBGCP3-203ENST00000462580 ZNF644Q9H582 1327 aaPredicted RBP9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 ARHGAP5Q13017 1502 aa9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 GLI2P10070 1586 aa9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 TCOF1Q13428 1488 aaKnown RBP9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 POTEMA6NI47 508 aa9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 PPP1R3GB7ZBB8 358 aa9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 BARGINQ6ZT62 677 aa9.56□□□□□ -0.88
TUBGCP3-203ENST00000462580 PBX2P40425 430 aa9.55□□□□□ -0.88
TUBGCP3-203ENST00000462580 HIC1Q14526 733 aa9.55□□□□□ -0.88
TUBGCP3-203ENST00000462580 TTC13Q8NBP0 860 aa9.55□□□□□ -0.88
TUBGCP3-203ENST00000462580 FAM198AQ9UFP1 575 aa9.55□□□□□ -0.88
TUBGCP3-203ENST00000462580 DNMT1P26358 1616 aaKnown RBP9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 GNPATO15228 680 aa9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 CERKQ8TCT0 537 aa9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 ZBED2Q9BTP6 218 aa9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 PCGF6Q9BYE7 350 aa9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 SYCP2Q9BX26 1530 aa9.54□□□□□ -0.88
TUBGCP3-203ENST00000462580 ABCC1P33527 1531 aa9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 ARHGEF12Q9NZN5 1544 aa9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 FAM50AQ14320 339 aaKnown RBP9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 KRTAP3-3Q9BYR6 98 aa9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 PLCH2O75038 1416 aa9.53□□□□□ -0.88
TUBGCP3-203ENST00000462580 ADGBQ8N7X0 1667 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 PRSS12P56730 875 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 PTPRKQ15262 1439 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 CDCA7LQ96GN5 454 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 MIA2Q96PC5 1412 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
TUBGCP3-203ENST00000462580 CD109Q6YHK3 1445 aa9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 ITGAEP38570 1179 aa9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 PADI6Q6TGC4 694 aa9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 ARAP3Q8WWN8 1544 aa9.51□□□□□ -0.89
TUBGCP3-203ENST00000462580 CFAP74Q9C0B2 1584 aa9.5□□□□□ -0.89
TUBGCP3-203ENST00000462580 FAM69CQ0P6D2 419 aa9.5□□□□□ -0.89
TUBGCP3-203ENST00000462580 SLC4A5Q9BY07 1137 aa9.5□□□□□ -0.89
TUBGCP3-203ENST00000462580 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
TUBGCP3-203ENST00000462580 FANCAO15360 1455 aa9.5□□□□□ -0.89
TUBGCP3-203ENST00000462580 RICTORQ6R327 1708 aa9.49□□□□□ -0.89
TUBGCP3-203ENST00000462580 ARHGEF5Q12774 1597 aa9.49□□□□□ -0.89
TUBGCP3-203ENST00000462580 FRMPD1Q5SYB0 1578 aa9.49□□□□□ -0.89
TUBGCP3-203ENST00000462580 KDM6BO15054 1643 aa9.49□□□□□ -0.89
TUBGCP3-203ENST00000462580 ABCC5O15440 1437 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 DAPK1P53355 1430 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 MBD5Q9P267 1494 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 LSM11P83369 360 aaKnown RBP eCLIP9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 MAP2K5Q13163 448 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 VPS9D1Q9Y2B5 631 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 GCC2Q8IWJ2 1684 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 TRAPPC8Q9Y2L5 1435 aa9.48□□□□□ -0.89
TUBGCP3-203ENST00000462580 IRF6O14896 467 aa9.47□□□□□ -0.89
TUBGCP3-203ENST00000462580 HNRNPMP52272 730 aaKnown RBP eCLIP9.47□□□□□ -0.893e-6■■□□□ 12.1
TUBGCP3-203ENST00000462580 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
TUBGCP3-203ENST00000462580 CDAN1Q8IWY9 1227 aa9.47□□□□□ -0.89
TUBGCP3-203ENST00000462580 AKNAQ7Z591 1439 aa9.47□□□□□ -0.89
TUBGCP3-203ENST00000462580 ADGRL1O94910 1474 aa9.47□□□□□ -0.89
TUBGCP3-203ENST00000462580 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.9
TUBGCP3-203ENST00000462580 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
TUBGCP3-203ENST00000462580 CCDC141Q6ZP82 1450 aa9.46□□□□□ -0.9
TUBGCP3-203ENST00000462580 INO80Q9ULG1 1556 aaPredicted RBP9.46□□□□□ -0.9
TUBGCP3-203ENST00000462580 KIDINS220Q9ULH0 1771 aa9.45□□□□□ -0.9
TUBGCP3-203ENST00000462580 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
TUBGCP3-203ENST00000462580 ADGRG1Q9Y653 693 aa9.45□□□□□ -0.9
TUBGCP3-203ENST00000462580 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
TUBGCP3-203ENST00000462580 MAST1Q9Y2H9 1570 aa9.45□□□□□ -0.9
TUBGCP3-203ENST00000462580 BHMG1C9JSJ3 638 aaPredicted RBP9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 TK2O00142 265 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 EFCAB2Q5VUJ9 269 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 KIAA1468Q9P260 1216 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 SCAPERQ9BY12 1400 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 NEO1Q92859 1461 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 ZFYVE16Q7Z3T8 1539 aa9.44□□□□□ -0.9
TUBGCP3-203ENST00000462580 ABCA6Q8N139 1617 aa9.43□□□□□ -0.9
TUBGCP3-203ENST00000462580 COL17A1Q9UMD9 1497 aaPredicted RBP9.43□□□□□ -0.9
TUBGCP3-203ENST00000462580 HRO43593 1189 aa9.43□□□□□ -0.9
TUBGCP3-203ENST00000462580 ADGRD1Q6QNK2 874 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms