RNA–Protein interactions for RNA: ENST00000462580.1

TUBGCP3-203, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-203ENST00000462580 AEBP2Q6ZN18 517 aaPredicted RBP21.91■■□□□ 1.1
TUBGCP3-203ENST00000462580 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
TUBGCP3-203ENST00000462580 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
TUBGCP3-203ENST00000462580 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
TUBGCP3-203ENST00000462580 PLPPR3Q6T4P5 718 aa17.37■□□□□ 0.37
TUBGCP3-203ENST00000462580 FOXD1Q16676 465 aa17.2■□□□□ 0.34
TUBGCP3-203ENST00000462580 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
TUBGCP3-203ENST00000462580 ADRA2BP18089 450 aa16.6■□□□□ 0.25
TUBGCP3-203ENST00000462580 PIAS4Q8N2W9 510 aaPredicted RBP16.16■□□□□ 0.18
TUBGCP3-203ENST00000462580 MSH5O43196 834 aa15.73■□□□□ 0.11
TUBGCP3-203ENST00000462580 PPP4R3CPQ6ZMV5 832 aa15.35■□□□□ 0.05
TUBGCP3-203ENST00000462580 KCNA4P22459 653 aa15.13■□□□□ 0.01
TUBGCP3-203ENST00000462580 MAPK8IP2Q13387 824 aaPredicted RBP15.07■□□□□ 0
TUBGCP3-203ENST00000462580 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
TUBGCP3-203ENST00000462580 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
TUBGCP3-203ENST00000462580 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
TUBGCP3-203ENST00000462580 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
TUBGCP3-203ENST00000462580 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
TUBGCP3-203ENST00000462580 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
TUBGCP3-203ENST00000462580 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
TUBGCP3-203ENST00000462580 HOXD11P31277 338 aaPredicted RBP14.54□□□□□ -0.08
TUBGCP3-203ENST00000462580 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
TUBGCP3-203ENST00000462580 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
TUBGCP3-203ENST00000462580 POTEDQ86YR6 584 aa14.24□□□□□ -0.13
TUBGCP3-203ENST00000462580 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
TUBGCP3-203ENST00000462580 DCAF8L1A6NGE4 600 aa14.04□□□□□ -0.16
TUBGCP3-203ENST00000462580 ZBTB22O15209 634 aa13.99□□□□□ -0.17
TUBGCP3-203ENST00000462580 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
TUBGCP3-203ENST00000462580 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
TUBGCP3-203ENST00000462580 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
TUBGCP3-203ENST00000462580 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
TUBGCP3-203ENST00000462580 U3KPZ7 1027 aaPredicted RBP13.64□□□□□ -0.23
TUBGCP3-203ENST00000462580 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
TUBGCP3-203ENST00000462580 RNF39Q9H2S5 420 aa13.56□□□□□ -0.24
TUBGCP3-203ENST00000462580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.37□□□□□ -0.27
TUBGCP3-203ENST00000462580 HNRNPUL2Q1KMD3 747 aaKnown RBP13.37□□□□□ -0.27
TUBGCP3-203ENST00000462580 SAMD1Q6SPF0 538 aaPredicted RBP13.36□□□□□ -0.27
TUBGCP3-203ENST00000462580 ATXN8OSP0DMR3 200 aa13.35□□□□□ -0.27
TUBGCP3-203ENST00000462580 C1QBPQ07021 282 aaKnown RBP13.35□□□□□ -0.27
TUBGCP3-203ENST00000462580 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
TUBGCP3-203ENST00000462580 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
TUBGCP3-203ENST00000462580 APLP2Q06481 763 aa13.17□□□□□ -0.3
TUBGCP3-203ENST00000462580 CAPN15O75808 1086 aa13.09□□□□□ -0.31
TUBGCP3-203ENST00000462580 TRHP20396 242 aaPredicted RBP13.06□□□□□ -0.32
TUBGCP3-203ENST00000462580 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
TUBGCP3-203ENST00000462580 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
TUBGCP3-203ENST00000462580 CCDC180Q9P1Z9 1646 aa12.95□□□□□ -0.34
TUBGCP3-203ENST00000462580 DSG3P32926 999 aa12.93□□□□□ -0.34
TUBGCP3-203ENST00000462580 POLA2Q14181 598 aa12.91□□□□□ -0.34
TUBGCP3-203ENST00000462580 ABCB7O75027 752 aa12.89□□□□□ -0.35
TUBGCP3-203ENST00000462580 MKRN4PQ13434 485 aaPredicted RBP12.76□□□□□ -0.37
TUBGCP3-203ENST00000462580 ZBTB12Q9Y330 459 aaPredicted RBP12.62□□□□□ -0.39
TUBGCP3-203ENST00000462580 FBLN2P98095 1184 aa12.6□□□□□ -0.39
TUBGCP3-203ENST00000462580 FKBP8Q14318 412 aa12.52□□□□□ -0.41
TUBGCP3-203ENST00000462580 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
TUBGCP3-203ENST00000462580 ABCC9O60706 1549 aa12.42□□□□□ -0.42
TUBGCP3-203ENST00000462580 SPDYE4A6NLX3 237 aa12.42□□□□□ -0.42
TUBGCP3-203ENST00000462580 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
TUBGCP3-203ENST00000462580 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
TUBGCP3-203ENST00000462580 SPDYE2Q495Y8 402 aa12.33□□□□□ -0.44
TUBGCP3-203ENST00000462580 PROM2Q8N271 834 aa12.32□□□□□ -0.44
TUBGCP3-203ENST00000462580 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
TUBGCP3-203ENST00000462580 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
TUBGCP3-203ENST00000462580 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
TUBGCP3-203ENST00000462580 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
TUBGCP3-203ENST00000462580 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
TUBGCP3-203ENST00000462580 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
TUBGCP3-203ENST00000462580 DCAF8L2P0C7V8 631 aa12.13□□□□□ -0.47
TUBGCP3-203ENST00000462580 AKT1S1Q96B36 256 aa12.13□□□□□ -0.47
TUBGCP3-203ENST00000462580 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
TUBGCP3-203ENST00000462580 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
TUBGCP3-203ENST00000462580 NACADO15069 1562 aa12.04□□□□□ -0.48
TUBGCP3-203ENST00000462580 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
TUBGCP3-203ENST00000462580 MYO15BQ96JP2 1530 aa12□□□□□ -0.49
TUBGCP3-203ENST00000462580 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
TUBGCP3-203ENST00000462580 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
TUBGCP3-203ENST00000462580 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
TUBGCP3-203ENST00000462580 SPDYE1Q8NFV5 336 aaPredicted RBP11.93□□□□□ -0.5
TUBGCP3-203ENST00000462580 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
TUBGCP3-203ENST00000462580 STAG3Q9UJ98 1225 aa11.91□□□□□ -0.5
TUBGCP3-203ENST00000462580 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
TUBGCP3-203ENST00000462580 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
TUBGCP3-203ENST00000462580 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
TUBGCP3-203ENST00000462580 IFNLR1Q8IU57 520 aaPredicted RBP11.79□□□□□ -0.52
TUBGCP3-203ENST00000462580 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
TUBGCP3-203ENST00000462580 MIER1Q8N108 512 aa11.74□□□□□ -0.53
TUBGCP3-203ENST00000462580 BICRAQ9NZM4 1560 aa11.74□□□□□ -0.53
TUBGCP3-203ENST00000462580 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
TUBGCP3-203ENST00000462580 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
TUBGCP3-203ENST00000462580 PLCD3Q8N3E9 789 aa11.7□□□□□ -0.54
TUBGCP3-203ENST00000462580 FXR2P51116 673 aaKnown RBP eCLIP11.69□□□□□ -0.54
TUBGCP3-203ENST00000462580 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
TUBGCP3-203ENST00000462580 CHADLQ6NUI6 762 aa11.63□□□□□ -0.55
TUBGCP3-203ENST00000462580 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
TUBGCP3-203ENST00000462580 KLHL34Q8N239 644 aa11.59□□□□□ -0.55
TUBGCP3-203ENST00000462580 PRKAR2AP13861 404 aaKnown RBP11.58□□□□□ -0.56
TUBGCP3-203ENST00000462580 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
TUBGCP3-203ENST00000462580 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
TUBGCP3-203ENST00000462580 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
TUBGCP3-203ENST00000462580 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms