RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 AAMPQ13685 434 aa17.6■□□□□ 0.41
VPS26B-201ENST00000281187 ATF7IPQ6VMQ6 1270 aa17.6■□□□□ 0.41
VPS26B-201ENST00000281187 GGNBP2Q9H3C7 697 aa17.6■□□□□ 0.41
VPS26B-201ENST00000281187 PRDM10Q9NQV6 1147 aa17.6■□□□□ 0.41
VPS26B-201ENST00000281187 K7ELQ4 463 aaPredicted RBP17.6■□□□□ 0.41
VPS26B-201ENST00000281187 TRIM27P14373 513 aa17.6■□□□□ 0.41
VPS26B-201ENST00000281187 ABCA5Q8WWZ7 1642 aa17.59■□□□□ 0.41
VPS26B-201ENST00000281187 SPAG9O60271 1321 aaKnown RBP17.59■□□□□ 0.41
VPS26B-201ENST00000281187 GAS2L3Q86XJ1 694 aa17.59■□□□□ 0.41
VPS26B-201ENST00000281187 EFCAB2Q5VUJ9 269 aa17.59■□□□□ 0.41
VPS26B-201ENST00000281187 GGT6Q6P531 493 aa17.59■□□□□ 0.41
VPS26B-201ENST00000281187 NINLQ9Y2I6 1382 aa17.58■□□□□ 0.41
VPS26B-201ENST00000281187 COL17A1Q9UMD9 1497 aaPredicted RBP17.58■□□□□ 0.41
VPS26B-201ENST00000281187 MBD5Q9P267 1494 aa17.58■□□□□ 0.4
VPS26B-201ENST00000281187 UQCRHLA0A096LP55 91 aa17.58■□□□□ 0.4
VPS26B-201ENST00000281187 UQCRHP07919 91 aa17.58■□□□□ 0.4
VPS26B-201ENST00000281187 CHD1LQ86WJ1 897 aa17.58■□□□□ 0.4
VPS26B-201ENST00000281187 ISY1Q9ULR0 285 aaKnown RBP17.58■□□□□ 0.4
VPS26B-201ENST00000281187 ZNF521Q96K83 1311 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 PDCL3Q9H2J4 239 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 WDR62O43379 1518 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 LAMC3Q9Y6N6 1575 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 AFAP1Q8N556 730 aa17.57■□□□□ 0.4
VPS26B-201ENST00000281187 FSD2A1L4K1 749 aa17.56■□□□□ 0.4
VPS26B-201ENST00000281187 ST18O60284 1047 aa17.56■□□□□ 0.4
VPS26B-201ENST00000281187 KANK1Q14678 1352 aa17.56■□□□□ 0.4
VPS26B-201ENST00000281187 CHMP4BQ9H444 224 aaKnown RBP17.56■□□□□ 0.4
VPS26B-201ENST00000281187 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
VPS26B-201ENST00000281187 CARD14Q9BXL6 1004 aa17.55■□□□□ 0.4
VPS26B-201ENST00000281187 STAG3Q9UJ98 1225 aa17.55■□□□□ 0.4
VPS26B-201ENST00000281187 ARHGEF12Q9NZN5 1544 aa17.54■□□□□ 0.4
VPS26B-201ENST00000281187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
VPS26B-201ENST00000281187 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
VPS26B-201ENST00000281187 BCL11BQ9C0K0 894 aaPredicted RBP17.53■□□□□ 0.4
VPS26B-201ENST00000281187 CIZ1Q9ULV3 898 aaPredicted RBP17.53■□□□□ 0.4
VPS26B-201ENST00000281187 NUCB2P80303 420 aa17.52■□□□□ 0.4
VPS26B-201ENST00000281187 RBM27Q9P2N5 1060 aaKnown RBP17.52■□□□□ 0.4
VPS26B-201ENST00000281187 PTPRGP23470 1445 aa17.52■□□□□ 0.4
VPS26B-201ENST00000281187 HMOX1P09601 288 aa17.52■□□□□ 0.4
VPS26B-201ENST00000281187 KIF16BQ96L93 1317 aa17.52■□□□□ 0.4
VPS26B-201ENST00000281187 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.39
VPS26B-201ENST00000281187 NSD3Q9BZ95 1437 aa17.52■□□□□ 0.39
VPS26B-201ENST00000281187 SYCE3A1L190 88 aa17.51■□□□□ 0.39
VPS26B-201ENST00000281187 SOX12O15370 315 aa17.51■□□□□ 0.39
VPS26B-201ENST00000281187 CDC45O75419 566 aa17.51■□□□□ 0.39
VPS26B-201ENST00000281187 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
VPS26B-201ENST00000281187 MAGI2Q86UL8 1455 aa17.5■□□□□ 0.39
VPS26B-201ENST00000281187 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
VPS26B-201ENST00000281187 A2MP01023 1474 aa17.5■□□□□ 0.39
VPS26B-201ENST00000281187 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
VPS26B-201ENST00000281187 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
VPS26B-201ENST00000281187 SLC4A10Q6U841 1118 aa17.5■□□□□ 0.39
VPS26B-201ENST00000281187 PODXL2Q9NZ53 605 aa17.49■□□□□ 0.39
VPS26B-201ENST00000281187 ZHX1Q9UKY1 873 aaPredicted RBP17.49■□□□□ 0.39
VPS26B-201ENST00000281187 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
VPS26B-201ENST00000281187 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
VPS26B-201ENST00000281187 ASXL1Q8IXJ9 1541 aa17.48■□□□□ 0.39
VPS26B-201ENST00000281187 TRIM6-TRIM34B2RNG4 842 aa17.48■□□□□ 0.39
VPS26B-201ENST00000281187 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
VPS26B-201ENST00000281187 FAM135AQ9P2D6 1515 aa17.48■□□□□ 0.39
VPS26B-201ENST00000281187 CHAF1AQ13111 956 aaPredicted RBP17.47■□□□□ 0.39
VPS26B-201ENST00000281187 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
VPS26B-201ENST00000281187 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
VPS26B-201ENST00000281187 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
VPS26B-201ENST00000281187 RAB3GAP1Q15042 981 aa17.46■□□□□ 0.39
VPS26B-201ENST00000281187 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
VPS26B-201ENST00000281187 CSPP1Q1MSJ5 1256 aa17.46■□□□□ 0.39
VPS26B-201ENST00000281187 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
VPS26B-201ENST00000281187 SYAP1Q96A49 352 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-201ENST00000281187 CCDC141Q6ZP82 1450 aa17.45■□□□□ 0.38
VPS26B-201ENST00000281187 MINK1Q8N4C8 1332 aaPredicted RBP17.45■□□□□ 0.38
VPS26B-201ENST00000281187 ERCC6Q03468 1493 aa17.45■□□□□ 0.38
VPS26B-201ENST00000281187 NEK4P51957 841 aa17.45■□□□□ 0.38
VPS26B-201ENST00000281187 RILPL2Q969X0 211 aa17.45■□□□□ 0.38
VPS26B-201ENST00000281187 KLHL40Q2TBA0 621 aa17.44■□□□□ 0.38
VPS26B-201ENST00000281187 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
VPS26B-201ENST00000281187 DRC7Q8IY82 874 aa17.44■□□□□ 0.38
VPS26B-201ENST00000281187 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
VPS26B-201ENST00000281187 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
VPS26B-201ENST00000281187 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
VPS26B-201ENST00000281187 RABEP1Q15276 862 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 ZSCAN23Q3MJ62 389 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 CCDC39Q9UFE4 941 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 MCCP23508 829 aa17.43■□□□□ 0.38
VPS26B-201ENST00000281187 INTS3Q68E01 1043 aaKnown RBP17.43■□□□□ 0.38
VPS26B-201ENST00000281187 PRKAR2BP31323 418 aa17.42■□□□□ 0.38
VPS26B-201ENST00000281187 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
VPS26B-201ENST00000281187 CHAMP1Q96JM3 812 aa17.42■□□□□ 0.38
VPS26B-201ENST00000281187 EVC2Q86UK5 1308 aa17.42■□□□□ 0.38
VPS26B-201ENST00000281187 OFD1O75665 1012 aa17.42■□□□□ 0.38
VPS26B-201ENST00000281187 SCAF11Q99590 1463 aaKnown RBP17.41■□□□□ 0.38
VPS26B-201ENST00000281187 INSRP06213 1382 aa17.41■□□□□ 0.38
VPS26B-201ENST00000281187 NUCB1Q02818 461 aa17.41■□□□□ 0.38
VPS26B-201ENST00000281187 GCC1Q96CN9 775 aa17.41■□□□□ 0.38
VPS26B-201ENST00000281187 GDPD2Q9HCC8 539 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms