RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
VPS26B-201ENST00000281187 SUPT5HO00267 1087 aaKnown RBP24.15■■□□□ 1.46
VPS26B-201ENST00000281187 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
VPS26B-201ENST00000281187 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
VPS26B-201ENST00000281187 DCAF8L2P0C7V8 631 aa23.56■■□□□ 1.36
VPS26B-201ENST00000281187 HRCP23327 699 aa23.39■■□□□ 1.34
VPS26B-201ENST00000281187 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
VPS26B-201ENST00000281187 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
VPS26B-201ENST00000281187 EHMT2Q96KQ7 1210 aa22.88■■□□□ 1.25
VPS26B-201ENST00000281187 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
VPS26B-201ENST00000281187 FAM9AQ8IZU1 332 aaPredicted RBP22.56■■□□□ 1.2
VPS26B-201ENST00000281187 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
VPS26B-201ENST00000281187 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
VPS26B-201ENST00000281187 MYO15BQ96JP2 1530 aa22.45■■□□□ 1.19
VPS26B-201ENST00000281187 ZEB1P37275 1124 aaPredicted RBP22.32■■□□□ 1.16
VPS26B-201ENST00000281187 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
VPS26B-201ENST00000281187 TRIM41Q8WV44 630 aa22.12■■□□□ 1.13
VPS26B-201ENST00000281187 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
VPS26B-201ENST00000281187 SCAF1Q9H7N4 1312 aaKnown RBP22.07■■□□□ 1.12
VPS26B-201ENST00000281187 CENPBP07199 599 aaPredicted RBP21.98■■□□□ 1.11
VPS26B-201ENST00000281187 YTHDC1Q96MU7 727 aaKnown RBP21.93■■□□□ 1.1
VPS26B-201ENST00000281187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
VPS26B-201ENST00000281187 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
VPS26B-201ENST00000281187 GTF3C3Q9Y5Q9 886 aa21.82■■□□□ 1.08
VPS26B-201ENST00000281187 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
VPS26B-201ENST00000281187 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
VPS26B-201ENST00000281187 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
VPS26B-201ENST00000281187 MYT1Q01538 1121 aa21.66■■□□□ 1.06
VPS26B-201ENST00000281187 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.06
VPS26B-201ENST00000281187 CCDC180Q9P1Z9 1646 aa21.42■■□□□ 1.02
VPS26B-201ENST00000281187 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
VPS26B-201ENST00000281187 UBTFP17480 764 aaKnown RBP21.31■■□□□ 1
VPS26B-201ENST00000281187 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
VPS26B-201ENST00000281187 APLP2Q06481 763 aa21.18■□□□□ 0.98
VPS26B-201ENST00000281187 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
VPS26B-201ENST00000281187 MIER1Q8N108 512 aa21■□□□□ 0.95
VPS26B-201ENST00000281187 BCANQ96GW7 911 aa20.88■□□□□ 0.93
VPS26B-201ENST00000281187 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
VPS26B-201ENST00000281187 ITGAEP38570 1179 aa20.77■□□□□ 0.92
VPS26B-201ENST00000281187 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
VPS26B-201ENST00000281187 NEFLP07196 543 aa20.67■□□□□ 0.9
VPS26B-201ENST00000281187 ERICH6Q7L0X2 663 aa20.64■□□□□ 0.9
VPS26B-201ENST00000281187 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.89
VPS26B-201ENST00000281187 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
VPS26B-201ENST00000281187 CEP162Q5TB80 1403 aa20.52■□□□□ 0.88
VPS26B-201ENST00000281187 SUPT16HQ9Y5B9 1047 aaKnown RBP20.5■□□□□ 0.87
VPS26B-201ENST00000281187 ABCC9O60706 1549 aa20.47■□□□□ 0.87
VPS26B-201ENST00000281187 FKBP8Q14318 412 aa20.46■□□□□ 0.87
VPS26B-201ENST00000281187 ATP1B4Q9UN42 357 aaPredicted RBP20.45■□□□□ 0.86
VPS26B-201ENST00000281187 ANP32EQ9BTT0 268 aa20.41■□□□□ 0.86
VPS26B-201ENST00000281187 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.86
VPS26B-201ENST00000281187 BCL11AQ9H165 835 aa20.32■□□□□ 0.84
VPS26B-201ENST00000281187 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
VPS26B-201ENST00000281187 SOGA1O94964 1423 aa20.3■□□□□ 0.84
VPS26B-201ENST00000281187 DDX10Q13206 875 aaKnown RBP20.29■□□□□ 0.84
VPS26B-201ENST00000281187 TRIM52Q96A61 297 aa20.28■□□□□ 0.84
VPS26B-201ENST00000281187 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
VPS26B-201ENST00000281187 TNIKQ9UKE5 1360 aa20.24■□□□□ 0.83
VPS26B-201ENST00000281187 HIRIP3Q9BW71 556 aaPredicted RBP20.23■□□□□ 0.83
VPS26B-201ENST00000281187 CCDC88BA6NC98 1476 aa20.21■□□□□ 0.83
VPS26B-201ENST00000281187 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
VPS26B-201ENST00000281187 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
VPS26B-201ENST00000281187 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
VPS26B-201ENST00000281187 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
VPS26B-201ENST00000281187 CLIP1P30622 1438 aa20.16■□□□□ 0.82
VPS26B-201ENST00000281187 PABPN1Q86U42 306 aaKnown RBP eCLIP20.15■□□□□ 0.82
VPS26B-201ENST00000281187 FAM50AQ14320 339 aaKnown RBP20.14■□□□□ 0.82
VPS26B-201ENST00000281187 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
VPS26B-201ENST00000281187 ANP32CO43423 234 aa20.12■□□□□ 0.81
VPS26B-201ENST00000281187 GOLGA3Q08378 1498 aa20.07■□□□□ 0.8
VPS26B-201ENST00000281187 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
VPS26B-201ENST00000281187 CDK11AQ9UQ88 783 aaPredicted RBP20.06■□□□□ 0.8
VPS26B-201ENST00000281187 WIZO95785 1651 aa20.04■□□□□ 0.8
VPS26B-201ENST00000281187 RUSC2Q8N2Y8 1516 aa20.04■□□□□ 0.8
VPS26B-201ENST00000281187 RBM19Q9Y4C8 960 aaKnown RBP20.03■□□□□ 0.8
VPS26B-201ENST00000281187 HNRNPUQ00839 825 aaKnown RBP eCLIP19.96■□□□□ 0.79
VPS26B-201ENST00000281187 EEA1Q15075 1411 aa19.93■□□□□ 0.78
VPS26B-201ENST00000281187 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
VPS26B-201ENST00000281187 POLR3GLQ9BT43 218 aa19.9■□□□□ 0.78
VPS26B-201ENST00000281187 KANK4Q5T7N3 995 aaPredicted RBP19.9■□□□□ 0.78
VPS26B-201ENST00000281187 P3H3Q8IVL6 736 aa19.89■□□□□ 0.77
VPS26B-201ENST00000281187 NBR1Q14596 966 aa19.88■□□□□ 0.77
VPS26B-201ENST00000281187 VPS8Q8N3P4 1428 aa19.84■□□□□ 0.77
VPS26B-201ENST00000281187 CEP164Q9UPV0 1460 aa19.84■□□□□ 0.77
VPS26B-201ENST00000281187 DHX57Q6P158 1386 aaKnown RBP19.83■□□□□ 0.77
VPS26B-201ENST00000281187 RTL5Q5HYW3 569 aaPredicted RBP19.79■□□□□ 0.76
VPS26B-201ENST00000281187 FAM9BQ8IZU0 186 aa19.75■□□□□ 0.75
VPS26B-201ENST00000281187 BAZ1AQ9NRL2 1556 aaPredicted RBP19.73■□□□□ 0.75
VPS26B-201ENST00000281187 SENP3-EIF4A1A0A087X0R7 540 aa19.72■□□□□ 0.75
VPS26B-201ENST00000281187 TONSLQ96HA7 1378 aa19.69■□□□□ 0.74
VPS26B-201ENST00000281187 CCNB3Q8WWL7 1395 aa19.65■□□□□ 0.74
VPS26B-201ENST00000281187 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
VPS26B-201ENST00000281187 B4GALNT3Q6L9W6 998 aa19.64■□□□□ 0.73
VPS26B-201ENST00000281187 NPM2Q86SE8 214 aaKnown RBP19.64■□□□□ 0.73
VPS26B-201ENST00000281187 RAB3GAP2Q9H2M9 1393 aa19.6■□□□□ 0.73
VPS26B-201ENST00000281187 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
VPS26B-201ENST00000281187 NACADO15069 1562 aa19.59■□□□□ 0.73
VPS26B-201ENST00000281187 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
VPS26B-201ENST00000281187 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
VPS26B-201ENST00000281187 MRS2Q9HD23 443 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms