RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Hfm1D3Z4R1 1434 aa20.92■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Prex1Q69ZK0 1650 aa20.92■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Eif2ak4Q9QZ05 1648 aa20.91■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Prdm2A2A7B5 1709 aaKnown RBP20.9■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Iqsec2Q5DU25 1478 aa20.9■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 MaddQ80U28 1577 aa20.9■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 CanxP35564 591 aaKnown RBP20.9■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Golga2Q921M4 999 aa20.9■□□□□ 0.94
Ttc39b-202ENSMUST00000048274 Dnai1Q8C0M8 701 aa20.89■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Nlrp6Q91WS2 869 aa20.89■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Erich6D3Z6S9 713 aa20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Kif3bQ61771 747 aa20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 B4galnt3Q6L8S8 986 aa20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Ift172Q6VH22 1749 aa20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Srpk2O54781 681 aaKnown RBP20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Dcaf11Q91VU6 549 aa20.88■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Adgrl1Q80TR1 1466 aa20.87■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Ino80Q6ZPV2 1559 aa20.86■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Plxnc1Q9QZC2 1574 aa20.86■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Ppp1r18Q8BQ30 594 aa20.85■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Fam135bQ9DAI6 1403 aa20.85■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Pdlim2Q8R1G6 349 aa20.84■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Skint5A7XUY5 1461 aa20.83■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 InsrP15208 1372 aa20.83■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 IbtkQ6ZPR6 1352 aaKnown RBP20.83■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 PrkcshO08795 521 aa20.83■□□□□ 0.93
Ttc39b-202ENSMUST00000048274 Scaf11E9PZM7 1456 aaKnown RBP20.82■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Os9Q8K2C7 672 aa20.82■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Sart3Q9JLI8 962 aaKnown RBP20.82■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Lemd3Q9WU40 921 aa20.82■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Trim58Q5NCC9 485 aa20.81■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Med14A2ABV5 1459 aaKnown RBP20.81■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Fan1Q69ZT1 1020 aa20.81■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Ipo8Q7TMY7 1010 aa20.81■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Irx3P81067 507 aa20.8■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 PalldQ9ET54 1408 aa20.8■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Hecw2Q6I6G8 1578 aa20.79■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Atp10aO54827 1508 aa20.79■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Puf60Q3UEB3 564 aaKnown RBP20.78■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Dbr1Q923B1 550 aa20.78■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Neurod2Q62414 383 aa20.78■□□□□ 0.92
Ttc39b-202ENSMUST00000048274 Stk24Q99KH8 431 aa20.76■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Ttc37F8VPK0 1563 aa20.76■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Tspyl2Q7TQI8 677 aa20.76■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Cdc42bpgQ80UW5 1551 aa20.76■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Gtf3c3Q3TMP1 882 aa20.75■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Ppp1r9bQ6R891 817 aaKnown RBP20.74■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Apbb1Q9QXJ1 710 aa20.74■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 OvosQ3UU35 1456 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 AglF8VPN4 1532 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Nrxn1Q9CS84 1514 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Ccdc183A2AJB1 534 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Cald1E9QA15 768 aaKnown RBP20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Ak7Q9D2H2 614 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 GsdmaQ9EST1 446 aa20.73■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Mroh1E0CZ22 1640 aa20.72■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Lrrc7Q80TE7 1490 aa20.72■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Slc52a2Q9D8F3 450 aa20.71■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 AdgbG3UZ78 1657 aa20.71■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Gas2l2Q5SSG4 860 aa20.71■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 P2rx7Q9Z1M0 595 aa20.71■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Gli2Q0VGT2 1544 aa20.71■□□□□ 0.91
Ttc39b-202ENSMUST00000048274 Znf541Q0GGX2 1363 aa20.7■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Duxf3A0A0N4SV92 674 aa20.7■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 DaxxO35613 739 aa20.7■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Kiaa0556Q8C753 1610 aa20.69■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Pank1Q8K4K6 548 aa20.69■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 AU022751B1B0V2 589 aa20.67■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Adamts7Q68SA9 1657 aa20.67■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Atl3Q91YH5 541 aa20.67■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Rlbp1Q9Z275 317 aa20.67■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 CenpjQ569L8 1344 aa20.65■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Trim30dE9PWL0 497 aa20.64■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Hs1bp3Q3TC93 395 aa20.64■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Eif2s2Q99L45 331 aaKnown RBP20.64■□□□□ 0.9
Ttc39b-202ENSMUST00000048274 Alpk3Q924C5 1678 aa20.64■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Ppp2r3aB2RXC8 1150 aa20.64■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Hsp90ab1P11499 724 aaKnown RBP20.64■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Ciz1Q8VEH2 845 aa20.62■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 4933416C03RikQ3V063 378 aa20.61■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Ccar1Q8CH18 1146 aaKnown RBP20.61■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 CltcQ68FD5 1675 aaKnown RBP20.61■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Stag3O70576 1240 aa20.6■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 IqubQ8CDK3 788 aa20.6■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Uhrf1bp1B2KF50 1429 aa20.59■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Htatsf1Q8BGC0 757 aa20.59■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Atxn3Q9CVD2 355 aa20.59■□□□□ 0.89
Ttc39b-202ENSMUST00000048274 Tbc1d32Q3URV1 1296 aa20.57■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Usp32F8VPZ3 1604 aa20.57■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Knl1Q66JQ7 1612 aa20.57■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Arhgap23Q69ZH9 1483 aa20.56■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Sptbn5F6UCX4 1208 aa20.56■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Cnga1P29974 684 aa20.56■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 RereQ80TZ9 1558 aa20.55■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Phlpp2Q8BXA7 1320 aa20.55■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Rabep1O35551 862 aa20.53■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Ksr2Q3UVC0 959 aa20.53■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 4930567H17RikQ3V0K5 233 aa20.53■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Dip2cE9PWR4 1557 aa20.52■□□□□ 0.88
Ttc39b-202ENSMUST00000048274 Tsen2Q6P7W5 460 aa20.52■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 123.3 ms