RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 LSM2P38203 95 aaKnown RBP-1.68□□□□□ -2.68
snR49snR49 SNU13P39990 126 aaKnown RBP-1.68□□□□□ -2.68
snR49snR49 YDR278CQ05612 105 aa-1.68□□□□□ -2.68
snR49snR49 Q0017Q9ZZX8 53 aa-1.68□□□□□ -2.68
snR49snR49 XRN1P22147 1528 aaKnown RBP-1.68□□□□□ -2.68
snR49snR49 LHP1P33399 275 aaKnown RBP-1.69□□□□□ -2.68
snR49snR49 YDR042CQ03205 200 aa-1.69□□□□□ -2.68
snR49snR49 POL1P13382 1468 aa-1.69□□□□□ -2.68
snR49snR49 CSF1Q12150 2958 aa-1.7□□□□□ -2.68
snR49snR49 TY3B-GQ99315 1547 aa-1.7□□□□□ -2.68
snR49snR49 PDR11P40550 1411 aa-1.7□□□□□ -2.68
snR49snR49 NKP2Q06162 153 aa-1.7□□□□□ -2.68
snR49snR49 FIG2P25653 1609 aa-1.7□□□□□ -2.68
snR49snR49 YDL022C-AP0C5L6 82 aa-1.71□□□□□ -2.68
snR49snR49 YGR146C-AQ8TGT9 53 aa-1.71□□□□□ -2.68
snR49snR49 VPS15P22219 1454 aa-1.71□□□□□ -2.68
snR49snR49 PDR10P51533 1564 aa-1.72□□□□□ -2.68
snR49snR49 QCR6P00127 147 aa-1.72□□□□□ -2.68
snR49snR49 YBL039W-BP0C268 59 aa-1.72□□□□□ -2.68
snR49snR49 WIP1Q2V2P8 89 aa-1.73□□□□□ -2.69
snR49snR49 YOR011W-AQ3E807 68 aa-1.73□□□□□ -2.69
snR49snR49 HAP1P0CE41 1502 aa-1.73□□□□□ -2.69
snR49snR49 YPL225WQ08971 146 aaKnown RBP-1.74□□□□□ -2.69
snR49snR49 KOG1P38873 1557 aa-1.74□□□□□ -2.69
snR49snR49 YER039C-AP0CD97 72 aa-1.75□□□□□ -2.69
snR49snR49 YKL068W-AQ3E826 78 aa-1.75□□□□□ -2.69
snR49snR49 MHF2Q3E829 80 aa-1.75□□□□□ -2.69
snR49snR49 APC1P53886 1748 aa-1.75□□□□□ -2.69
snR49snR49 VMA7P39111 118 aa-1.76□□□□□ -2.69
snR49snR49 YMR090WQ04304 227 aaKnown RBP-1.76□□□□□ -2.69
snR49snR49 YOR192C-CQ3E736 78 aa-1.76□□□□□ -2.69
snR49snR49 KSH1Q8TGJ3 72 aa-1.76□□□□□ -2.69
snR49snR49 IRA1P18963 3092 aa-1.77□□□□□ -2.69
snR49snR49 DYN2Q02647 92 aa-1.77□□□□□ -2.69
snR49snR49 TRA1P38811 3744 aa-1.78□□□□□ -2.69
snR49snR49 YOR032W-AQ8TGS1 66 aa-1.78□□□□□ -2.69
snR49snR49 YOR105WQ08504 108 aa-1.79□□□□□ -2.7
snR49snR49 YOR314WQ12506 109 aa-1.79□□□□□ -2.7
snR49snR49 IRA2P19158 3079 aa-1.8□□□□□ -2.7
snR49snR49 SIN3P22579 1536 aa-1.8□□□□□ -2.7
snR49snR49 CHD1P32657 1468 aa-1.8□□□□□ -2.7
snR49snR49 RPA190P10964 1664 aaKnown RBP-1.8□□□□□ -2.7
snR49snR49 GDB1Q06625 1536 aa-1.81□□□□□ -2.7
snR49snR49 YML054C-AQ3E809 52 aa-1.82□□□□□ -2.7
snR49snR49 THO2P53552 1597 aaKnown RBP-1.82□□□□□ -2.7
snR49snR49 MSL1P40567 111 aaPredicted RBP-1.83□□□□□ -2.7
snR49snR49 SUS1Q6WNK7 96 aa-1.83□□□□□ -2.7
snR49snR49 SPI1P40092 148 aa-1.84□□□□□ -2.7
snR49snR49 SPP41P38904 1435 aa-1.84□□□□□ -2.7
snR49snR49 TIM12P32830 109 aa-1.85□□□□□ -2.71
snR49snR49 YMR082CQ04276 118 aa-1.85□□□□□ -2.71
snR49snR49 GEA1P47102 1408 aaPredicted RBP-1.85□□□□□ -2.71
snR49snR49 FKS3Q04952 1785 aa-1.85□□□□□ -2.71
snR49snR49 YPR145C-AQ2V2P0 78 aa-1.86□□□□□ -2.71
snR49snR49 YBR230W-AQ3E762 66 aa-1.86□□□□□ -2.71
snR49snR49 RPL29P05747 59 aaPredicted RBP-1.88□□□□□ -2.71
snR49snR49 SWR1Q05471 1514 aa-1.89□□□□□ -2.71
snR49snR49 SSS1P35179 80 aa-1.89□□□□□ -2.71
snR49snR49 YGR121W-AQ3E816 71 aa-1.89□□□□□ -2.71
snR49snR49 YGR035W-AQ45U48 73 aa-1.89□□□□□ -2.71
snR49snR49 REV3P14284 1504 aa-1.9□□□□□ -2.71
snR49snR49 YOR304C-AO14468 76 aa-1.9□□□□□ -2.71
snR49snR49 YDR034C-AP0C289 58 aa-1.9□□□□□ -2.71
snR49snR49 YGL194C-AQ2V2P6 80 aa-1.9□□□□□ -2.71
snR49snR49 QCR9P22289 66 aa-1.91□□□□□ -2.72
snR49snR49 YKL065W-AQ2V2P2 73 aa-1.91□□□□□ -2.72
snR49snR49 YMR175W-AQ3E766 64 aa-1.91□□□□□ -2.72
snR49snR49 DNF1P32660 1571 aa-1.92□□□□□ -2.72
snR49snR49 GEA2P39993 1459 aaKnown RBP-1.92□□□□□ -2.72
snR49snR49 HUB1Q6Q546 73 aa-1.92□□□□□ -2.72
snR49snR49 YMR105W-AQ8TGS8 64 aa-1.92□□□□□ -2.72
snR49snR49 SNQ2P32568 1501 aaKnown RBP-1.93□□□□□ -2.72
snR49snR49 TSC11P40061 1430 aa-1.93□□□□□ -2.72
snR49snR49 RPS30AP0CX33 63 aaKnown RBP-1.94□□□□□ -2.72
snR49snR49 RPS30BP0CX34 63 aaKnown RBP-1.94□□□□□ -2.72
snR49snR49 PAU7P39545 55 aa-1.94□□□□□ -2.72
snR49snR49 RPS12P48589 143 aaKnown RBP-1.94□□□□□ -2.72
snR49snR49 YSP2Q06681 1438 aa-1.96□□□□□ -2.72
snR49snR49 YLR157W-DP0CE99 70 aa-1.96□□□□□ -2.72
snR49snR49 YER137CP40083 148 aaKnown RBP-1.96□□□□□ -2.72
snR49snR49 SWM2P40342 146 aa-1.97□□□□□ -2.72
snR49snR49 YCL001W-BQ96VH2 84 aa-1.97□□□□□ -2.72
snR49snR49 PDR15Q04182 1529 aaKnown RBP-1.98□□□□□ -2.73
snR49snR49 YOR093CQ12275 1648 aa-1.99□□□□□ -2.73
snR49snR49 FLO1P32768 1537 aa-2□□□□□ -2.73
snR49snR49 PDR12Q02785 1511 aa-2□□□□□ -2.73
snR49snR49 CWP2P43497 92 aa-2□□□□□ -2.73
snR49snR49 ERI1P62651 68 aaKnown RBP-2□□□□□ -2.73
snR49snR49 YOR316C-AQ3E806 69 aa-2.01□□□□□ -2.73
snR49snR49 RPO31P04051 1460 aa-2.01□□□□□ -2.73
snR49snR49 MMS22Q06164 1454 aa-2.01□□□□□ -2.73
snR49snR49 DNF2Q12675 1612 aa-2.02□□□□□ -2.73
snR49snR49 MDS3P53094 1487 aa-2.02□□□□□ -2.73
snR49snR49 IQG1Q12280 1495 aa-2.02□□□□□ -2.73
snR49snR49 ARO1P08566 1588 aaKnown RBP-2.02□□□□□ -2.73
snR49snR49 YHR073W-AP0C5N7 58 aa-2.03□□□□□ -2.73
snR49snR49 TY1B-DR4Q07793 1604 aa-2.03□□□□□ -2.73
snR49snR49 RRP5Q05022 1729 aaKnown RBP-2.03□□□□□ -2.73
snR49snR49 YOL131WQ08270 108 aa-2.04□□□□□ -2.74
snR49snR49 SSK2P53599 1579 aa-2.06□□□□□ -2.74
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms