Protein–RNA interactions for Protein: P40567

MSL1, U2 small nuclear ribonucleoprotein B'', yeastyeast

Predicted RBP Predictions only

Length 111 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSL1P40567 NSR1YGR159C 1245 nt14.57□□□□□ -0.08
MSL1P40567 YML009W-BYML009W-B 477 nt13.93□□□□□ -0.18
MSL1P40567 MDJ1YFL016C 1536 nt13.59□□□□□ -0.23
MSL1P40567 NOP1YDL014W 984 nt13.3□□□□□ -0.28
MSL1P40567 YJL027CYJL027C 417 nt12.5□□□□□ -0.41
MSL1P40567 SSA3YBL075C 1950 nt12.46□□□□□ -0.41
MSL1P40567 YBR190WYBR190W 312 nt11.85□□□□□ -0.51
MSL1P40567 DBP2YNL112W 1641 nt11.73□□□□□ -0.53
MSL1P40567 SRX1YKL086W 384 nt11.6□□□□□ -0.55
MSL1P40567 YKL036CYKL036C 393 nt11.53□□□□□ -0.56
MSL1P40567 RTC3YHR087W 336 nt11.49□□□□□ -0.57
MSL1P40567 Q0297Q0297 156 nt11.39□□□□□ -0.59
MSL1P40567 PUT4YOR348C 1884 nt11.32□□□□□ -0.6
MSL1P40567 TRN1tP(UGG)A 72 nt10.94□□□□□ -0.66
MSL1P40567 SUF9tP(UGG)F 72 nt10.94□□□□□ -0.66
MSL1P40567 SUF8tP(UGG)H 72 nt10.94□□□□□ -0.66
MSL1P40567 tP(UGG)LtP(UGG)L 72 nt10.94□□□□□ -0.66
MSL1P40567 SUF7tP(UGG)M 72 nt10.94□□□□□ -0.66
MSL1P40567 tP(UGG)N1tP(UGG)N1 72 nt10.94□□□□□ -0.66
MSL1P40567 tP(UGG)N2tP(UGG)N2 72 nt10.94□□□□□ -0.66
MSL1P40567 tP(UGG)O1tP(UGG)O1 72 nt10.94□□□□□ -0.66
MSL1P40567 SUF11tP(UGG)O2 72 nt10.94□□□□□ -0.66
MSL1P40567 YCR051WYCR051W 669 nt10.9□□□□□ -0.66
MSL1P40567 RVS167YDR388W 1449 nt10.9□□□□□ -0.66
MSL1P40567 SPT5YML010W 3192 nt10.89□□□□□ -0.67
MSL1P40567 SSA4YER103W 1929 nt10.88□□□□□ -0.67
MSL1P40567 ARE1YCR048W 1833 nt10.86□□□□□ -0.67
MSL1P40567 POA1YBR022W 534 nt10.86□□□□□ -0.67
MSL1P40567 BSC6YOL137W 1494 nt10.81□□□□□ -0.68
MSL1P40567 CCC1YLR220W 969 nt10.75□□□□□ -0.69
MSL1P40567 YHR049C-AYHR049C-A 297 nt10.73□□□□□ -0.69
MSL1P40567 SCJ1YMR214W 1134 nt10.64□□□□□ -0.71
MSL1P40567 SAH1YER043C 1350 nt10.6□□□□□ -0.71
MSL1P40567 BDF1YLR399C 2061 nt10.55□□□□□ -0.72
MSL1P40567 OPI9YLR338W 858 nt10.52□□□□□ -0.73
MSL1P40567 URN1YPR152C 1398 nt10.48□□□□□ -0.73
MSL1P40567 PAC11YDR488C 1602 nt10.43□□□□□ -0.74
MSL1P40567 TAT1YBR069C 1860 nt10.41□□□□□ -0.74
MSL1P40567 BUD23YCR047C 828 nt10.39□□□□□ -0.75
MSL1P40567 SHR5YOL110W 714 nt10.34□□□□□ -0.75
MSL1P40567 MEP2YNL142W 1500 nt10.24□□□□□ -0.77
MSL1P40567 NVJ2YPR091C 2313 nt10.23□□□□□ -0.77
MSL1P40567 DEP1YAL013W 1218 nt10.22□□□□□ -0.77
MSL1P40567 PUN1YLR414C 792 nt10.22□□□□□ -0.77
MSL1P40567 RPP1BYDL130W 321 nt10.21□□□□□ -0.77
MSL1P40567 RPN10YHR200W 807 nt10.21□□□□□ -0.77
MSL1P40567 NAB2YGL122C 1578 nt10.18□□□□□ -0.78
MSL1P40567 PTC2YER089C 1395 nt10.18□□□□□ -0.78
MSL1P40567 YOL085CYOL085C 342 nt10.12□□□□□ -0.79
MSL1P40567 tP(UGG)O3tP(UGG)O3 72 nt10.09□□□□□ -0.79
MSL1P40567 SCS3YGL126W 1143 nt10.08□□□□□ -0.8
MSL1P40567 YNL208WYNL208W 600 nt10.05□□□□□ -0.8
MSL1P40567 DCW1YKL046C 1350 nt10.01□□□□□ -0.81
MSL1P40567 YJL225CYJL225C 5277 nt9.99□□□□□ -0.81
MSL1P40567 YBR220CYBR220C 1683 nt9.98□□□□□ -0.81
MSL1P40567 YJR018WYJR018W 363 nt9.97□□□□□ -0.81
MSL1P40567 FIS1YIL065C 468 nt9.96□□□□□ -0.82
MSL1P40567 YMR090WYMR090W 684 nt9.92□□□□□ -0.82
MSL1P40567 FPS1YLL043W 2010 nt9.91□□□□□ -0.82
MSL1P40567 DAL1YIR027C 1383 nt9.9□□□□□ -0.82
MSL1P40567 EMI2YDR516C 1503 nt9.89□□□□□ -0.83
MSL1P40567 PKP1YIL042C 1185 nt9.89□□□□□ -0.83
MSL1P40567 YPS1YLR120C 1710 nt9.89□□□□□ -0.83
MSL1P40567 PCH2YBR186W 1695 nt9.82□□□□□ -0.84
MSL1P40567 PET122YER153C 765 nt9.81□□□□□ -0.84
MSL1P40567 YDJ1YNL064C 1230 nt9.81□□□□□ -0.84
MSL1P40567 PHO4YFR034C 939 nt9.8□□□□□ -0.84
MSL1P40567 YHR165W-AYHR165W-A 312 nt9.8□□□□□ -0.84
MSL1P40567 FPR4YLR449W 1179 nt9.8□□□□□ -0.84
MSL1P40567 GUT2YIL155C 1950 nt9.8□□□□□ -0.84
MSL1P40567 SEC11YIR022W 504 nt9.79□□□□□ -0.84
MSL1P40567 SDH1YKL148C 1923 nt9.79□□□□□ -0.84
MSL1P40567 YDL221WYDL221W 552 nt9.77□□□□□ -0.85
MSL1P40567 INM2YDR287W 879 nt9.74□□□□□ -0.85
MSL1P40567 YDR095CYDR095C 411 nt9.72□□□□□ -0.85
MSL1P40567 YJR120WYJR120W 351 nt9.65□□□□□ -0.86
MSL1P40567 RDN37-1RDN37-1 5354 nt9.65□□□□□ -0.87
MSL1P40567 RDN37-2RDN37-2 5354 nt9.65□□□□□ -0.87
MSL1P40567 GAR1YHR089C 618 nt9.64□□□□□ -0.87
MSL1P40567 PIB2YGL023C 1908 nt9.6□□□□□ -0.87
MSL1P40567 SCC4YER147C 1875 nt9.6□□□□□ -0.87
MSL1P40567 CAC2YML102W 1407 nt9.59□□□□□ -0.87
MSL1P40567 RPP2BYDR382W 333 nt9.58□□□□□ -0.88
MSL1P40567 PTP1YDL230W 1008 nt9.56□□□□□ -0.88
MSL1P40567 RPP2AYOL039W 321 nt9.53□□□□□ -0.88
MSL1P40567 SCR1SCR1 522 nt9.53□□□□□ -0.88
MSL1P40567 SSA1YAL005C 1929 nt9.51□□□□□ -0.89
MSL1P40567 RTF1YGL244W 1677 nt9.5□□□□□ -0.89
MSL1P40567 YBL100CYBL100C 315 nt9.49□□□□□ -0.89
MSL1P40567 IRC15YPL017C 1500 nt9.48□□□□□ -0.89
MSL1P40567 YSC84YHR016C 1407 nt9.47□□□□□ -0.89
MSL1P40567 RRN5YLR141W 1092 nt9.45□□□□□ -0.9
MSL1P40567 GIS3YLR094C 1509 nt9.42□□□□□ -0.9
MSL1P40567 UME6YDR207C 2511 nt9.42□□□□□ -0.9
MSL1P40567 BOP3YNL042W 1191 nt9.39□□□□□ -0.91
MSL1P40567 YHL050CYHL050C 2094 nt9.38□□□□□ -0.91
MSL1P40567 ALF1YNL148C 765 nt9.38□□□□□ -0.91
MSL1P40567 BOR1YNL275W 1731 nt9.38□□□□□ -0.91
MSL1P40567 TIR1YER011W 765 nt9.37□□□□□ -0.91
MSL1P40567 FUN26YAL022C 1554 nt9.35□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms