Protein–RNA interactions for Protein: P39111

VMA7, V-type proton ATPase subunit F, yeastyeast

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA7P39111 NSR1YGR159C 1245 nt16.73■□□□□ 0.27
VMA7P39111 YML009W-BYML009W-B 477 nt16.04■□□□□ 0.16
VMA7P39111 MDJ1YFL016C 1536 nt15.73■□□□□ 0.11
VMA7P39111 NOP1YDL014W 984 nt15.21■□□□□ 0.03
VMA7P39111 SSA3YBL075C 1950 nt14.54□□□□□ -0.08
VMA7P39111 YJL027CYJL027C 417 nt14.4□□□□□ -0.1
VMA7P39111 YBR190WYBR190W 312 nt13.65□□□□□ -0.22
VMA7P39111 DBP2YNL112W 1641 nt13.57□□□□□ -0.24
VMA7P39111 SRX1YKL086W 384 nt13.31□□□□□ -0.28
VMA7P39111 RTC3YHR087W 336 nt13.25□□□□□ -0.29
VMA7P39111 YKL036CYKL036C 393 nt13.19□□□□□ -0.3
VMA7P39111 PUT4YOR348C 1884 nt13.12□□□□□ -0.31
VMA7P39111 Q0297Q0297 156 nt13.04□□□□□ -0.32
VMA7P39111 SPT5YML010W 3192 nt12.69□□□□□ -0.38
VMA7P39111 SSA4YER103W 1929 nt12.67□□□□□ -0.38
VMA7P39111 ARE1YCR048W 1833 nt12.6□□□□□ -0.39
VMA7P39111 TRN1tP(UGG)A 72 nt12.59□□□□□ -0.39
VMA7P39111 SUF9tP(UGG)F 72 nt12.59□□□□□ -0.39
VMA7P39111 SUF8tP(UGG)H 72 nt12.59□□□□□ -0.39
VMA7P39111 tP(UGG)LtP(UGG)L 72 nt12.59□□□□□ -0.39
VMA7P39111 SUF7tP(UGG)M 72 nt12.59□□□□□ -0.39
VMA7P39111 tP(UGG)N1tP(UGG)N1 72 nt12.59□□□□□ -0.39
VMA7P39111 tP(UGG)N2tP(UGG)N2 72 nt12.59□□□□□ -0.39
VMA7P39111 tP(UGG)O1tP(UGG)O1 72 nt12.59□□□□□ -0.39
VMA7P39111 SUF11tP(UGG)O2 72 nt12.59□□□□□ -0.39
VMA7P39111 POA1YBR022W 534 nt12.59□□□□□ -0.39
VMA7P39111 YCR051WYCR051W 669 nt12.52□□□□□ -0.41
VMA7P39111 BSC6YOL137W 1494 nt12.52□□□□□ -0.41
VMA7P39111 RVS167YDR388W 1449 nt12.51□□□□□ -0.41
VMA7P39111 YHR049C-AYHR049C-A 297 nt12.43□□□□□ -0.42
VMA7P39111 CCC1YLR220W 969 nt12.39□□□□□ -0.43
VMA7P39111 BDF1YLR399C 2061 nt12.3□□□□□ -0.44
VMA7P39111 SCJ1YMR214W 1134 nt12.3□□□□□ -0.44
VMA7P39111 SAH1YER043C 1350 nt12.27□□□□□ -0.45
VMA7P39111 PAC11YDR488C 1602 nt12.15□□□□□ -0.47
VMA7P39111 OPI9YLR338W 858 nt12.14□□□□□ -0.47
VMA7P39111 TAT1YBR069C 1860 nt12.12□□□□□ -0.47
VMA7P39111 URN1YPR152C 1398 nt12.12□□□□□ -0.47
VMA7P39111 BUD23YCR047C 828 nt12.03□□□□□ -0.48
VMA7P39111 SHR5YOL110W 714 nt11.88□□□□□ -0.51
VMA7P39111 NVJ2YPR091C 2313 nt11.88□□□□□ -0.51
VMA7P39111 MEP2YNL142W 1500 nt11.86□□□□□ -0.51
VMA7P39111 DEP1YAL013W 1218 nt11.81□□□□□ -0.52
VMA7P39111 PUN1YLR414C 792 nt11.76□□□□□ -0.53
VMA7P39111 PTC2YER089C 1395 nt11.76□□□□□ -0.53
VMA7P39111 NAB2YGL122C 1578 nt11.75□□□□□ -0.53
VMA7P39111 RPN10YHR200W 807 nt11.71□□□□□ -0.53
VMA7P39111 RPP1BYDL130W 321 nt11.69□□□□□ -0.54
VMA7P39111 DCW1YKL046C 1350 nt11.65□□□□□ -0.55
VMA7P39111 YOL085CYOL085C 342 nt11.61□□□□□ -0.55
VMA7P39111 tP(UGG)O3tP(UGG)O3 72 nt11.58□□□□□ -0.56
VMA7P39111 YBR220CYBR220C 1683 nt11.58□□□□□ -0.56
VMA7P39111 SCS3YGL126W 1143 nt11.55□□□□□ -0.56
VMA7P39111 FIS1YIL065C 468 nt11.54□□□□□ -0.56
VMA7P39111 YNL208WYNL208W 600 nt11.54□□□□□ -0.56
VMA7P39111 YJR018WYJR018W 363 nt11.49□□□□□ -0.57
VMA7P39111 EMI2YDR516C 1503 nt11.46□□□□□ -0.57
VMA7P39111 YPS1YLR120C 1710 nt11.44□□□□□ -0.58
VMA7P39111 YMR090WYMR090W 684 nt11.44□□□□□ -0.58
VMA7P39111 DAL1YIR027C 1383 nt11.42□□□□□ -0.58
VMA7P39111 PCH2YBR186W 1695 nt11.4□□□□□ -0.58
VMA7P39111 GUT2YIL155C 1950 nt11.37□□□□□ -0.59
VMA7P39111 PKP1YIL042C 1185 nt11.37□□□□□ -0.59
VMA7P39111 SDH1YKL148C 1923 nt11.35□□□□□ -0.59
VMA7P39111 YHR165W-AYHR165W-A 312 nt11.34□□□□□ -0.59
VMA7P39111 PHO4YFR034C 939 nt11.33□□□□□ -0.6
VMA7P39111 FPR4YLR449W 1179 nt11.32□□□□□ -0.6
VMA7P39111 FPS1YLL043W 2010 nt11.3□□□□□ -0.6
VMA7P39111 YDL221WYDL221W 552 nt11.3□□□□□ -0.6
VMA7P39111 SEC11YIR022W 504 nt11.3□□□□□ -0.6
VMA7P39111 PET122YER153C 765 nt11.28□□□□□ -0.6
VMA7P39111 YDR095CYDR095C 411 nt11.23□□□□□ -0.61
VMA7P39111 YDJ1YNL064C 1230 nt11.23□□□□□ -0.61
VMA7P39111 PIB2YGL023C 1908 nt11.19□□□□□ -0.62
VMA7P39111 INM2YDR287W 879 nt11.18□□□□□ -0.62
VMA7P39111 YJR120WYJR120W 351 nt11.17□□□□□ -0.62
VMA7P39111 CAC2YML102W 1407 nt11.14□□□□□ -0.63
VMA7P39111 SCC4YER147C 1875 nt11.12□□□□□ -0.63
VMA7P39111 GAR1YHR089C 618 nt11.08□□□□□ -0.64
VMA7P39111 PTP1YDL230W 1008 nt11.06□□□□□ -0.64
VMA7P39111 UME6YDR207C 2511 nt11.03□□□□□ -0.64
VMA7P39111 RTF1YGL244W 1677 nt11.02□□□□□ -0.64
VMA7P39111 RPP2BYDR382W 333 nt11□□□□□ -0.65
VMA7P39111 RPP2AYOL039W 321 nt10.99□□□□□ -0.65
VMA7P39111 YSC84YHR016C 1407 nt10.99□□□□□ -0.65
VMA7P39111 IRC15YPL017C 1500 nt10.98□□□□□ -0.65
VMA7P39111 YBL100CYBL100C 315 nt10.95□□□□□ -0.66
VMA7P39111 GIS3YLR094C 1509 nt10.92□□□□□ -0.66
VMA7P39111 YHL050CYHL050C 2094 nt10.91□□□□□ -0.66
VMA7P39111 BOR1YNL275W 1731 nt10.9□□□□□ -0.66
VMA7P39111 SCR1SCR1 522 nt10.89□□□□□ -0.67
VMA7P39111 PTK1YKL198C 1989 nt10.86□□□□□ -0.67
VMA7P39111 BOP3YNL042W 1191 nt10.86□□□□□ -0.67
VMA7P39111 SSA1YAL005C 1929 nt10.85□□□□□ -0.67
VMA7P39111 RRN5YLR141W 1092 nt10.84□□□□□ -0.67
VMA7P39111 YJL225CYJL225C 5277 nt10.83□□□□□ -0.68
VMA7P39111 ALF1YNL148C 765 nt10.8□□□□□ -0.68
VMA7P39111 TIR1YER011W 765 nt10.78□□□□□ -0.68
VMA7P39111 FUN26YAL022C 1554 nt10.77□□□□□ -0.68
VMA7P39111 RRT12YCR045C 1476 nt10.72□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 8.6 ms