RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 MTC1P47018 478 aaKnown RBP10.7□□□□□ -0.7
snR49snR49 FAP1P53971 965 aa10.08□□□□□ -0.8
snR49snR49 DRS1P32892 752 aaKnown RBP9.58□□□□□ -0.88
snR49snR49 PRY3P47033 881 aa9.49□□□□□ -0.89
snR49snR49 PRI1P10363 409 aa9.26□□□□□ -0.93
snR49snR49 AAD16Q02895 342 aa9.25□□□□□ -0.93
snR49snR49 YCK3P39962 524 aa9□□□□□ -0.97
snR49snR49 ISW2Q08773 1120 aa8.94□□□□□ -0.98
snR49snR49 RPG1P38249 964 aaKnown RBP8.89□□□□□ -0.99
snR49snR49 HAA1Q12753 694 aaKnown RBP8.87□□□□□ -0.99
snR49snR49 TSR3Q12094 313 aaKnown RBP8.73□□□□□ -1.01
snR49snR49 DIP2Q12220 943 aaPredicted RBP8.55□□□□□ -1.04
snR49snR49 RSE1Q04693 1361 aaKnown RBP8.37□□□□□ -1.07
snR49snR49 MRPL32P25348 183 aa8.37□□□□□ -1.07
snR49snR49 RPL17AP05740 184 aaKnown RBP8.15□□□□□ -1.1
snR49snR49 YGL015CP33199 130 aa8.15□□□□□ -1.1
snR49snR49 RPL17BP46990 184 aaKnown RBP8.15□□□□□ -1.1
snR49snR49 AVT3P36062 692 aa8.13□□□□□ -1.11
snR49snR49 REB1P21538 810 aa8.12□□□□□ -1.11
snR49snR49 CDC27P38042 758 aa7.91□□□□□ -1.14
snR49snR49 YKR023WP36119 530 aaKnown RBP7.79□□□□□ -1.16
snR49snR49 SPT21P35209 758 aa7.77□□□□□ -1.17
snR49snR49 BFR2Q06631 534 aaKnown RBP7.76□□□□□ -1.17
snR49snR49 UBP10P53874 792 aaPredicted RBP7.71□□□□□ -1.18
snR49snR49 MAP2P38174 421 aaKnown RBP7.7□□□□□ -1.18
snR49snR49 BUD31P25337 157 aaPredicted RBP7.65□□□□□ -1.18
snR49snR49 HOP09932 586 aa7.62□□□□□ -1.19
snR49snR49 TFC8Q12308 588 aa7.62□□□□□ -1.19
snR49snR49 DCD1P06773 312 aa7.6□□□□□ -1.19
snR49snR49 SCY1P53009 804 aa7.46□□□□□ -1.22
snR49snR49 RIM101P33400 625 aa7.42□□□□□ -1.22
snR49snR49 SLX5P32828 619 aaKnown RBP7.39□□□□□ -1.23
snR49snR49 TIF4632P39936 914 aaKnown RBP7.38□□□□□ -1.23
snR49snR49 TGL3P40308 642 aa7.38□□□□□ -1.23
snR49snR49 BCH2P36122 765 aa7.36□□□□□ -1.23
snR49snR49 UBP9P39967 754 aa7.26□□□□□ -1.25
snR49snR49 SIS1P25294 352 aaKnown RBP7.23□□□□□ -1.25
snR49snR49 OXP1P28273 1286 aa7.17□□□□□ -1.26
snR49snR49 EPS1P40557 701 aa7.14□□□□□ -1.27
snR49snR49 BDF1P35817 686 aa7.13□□□□□ -1.27
snR49snR49 MST1P07236 462 aa7.04□□□□□ -1.28
snR49snR49 YIL055CP40523 627 aaKnown RBP7.03□□□□□ -1.28
snR49snR49 PTP3P40048 928 aa7.02□□□□□ -1.29
snR49snR49 YOR238WQ08634 303 aa6.98□□□□□ -1.29
snR49snR49 YBL029C-AQ3E756 94 aa6.97□□□□□ -1.29
snR49snR49 RSM7P47150 247 aa6.94□□□□□ -1.3
snR49snR49 NSR1P27476 414 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
snR49snR49 BBC1P47068 1157 aa6.91□□□□□ -1.3
snR49snR49 AI2P03876 854 aa6.9□□□□□ -1.3
snR49snR49 VNX1P42839 908 aa6.89□□□□□ -1.31
snR49snR49 YAH1Q12184 172 aaKnown RBP6.87□□□□□ -1.31
snR49snR49 YAP5P40574 245 aa6.86□□□□□ -1.31
snR49snR49 SPP1Q03012 353 aa6.8□□□□□ -1.32
snR49snR49 WSC3Q12215 556 aa6.8□□□□□ -1.32
snR49snR49 YLR271WQ06152 274 aa6.76□□□□□ -1.33
snR49snR49 TIF11P38912 153 aaKnown RBP6.73□□□□□ -1.33
snR49snR49 AIR2Q12476 344 aaKnown RBP6.72□□□□□ -1.33
snR49snR49 GTT3P39996 337 aa6.71□□□□□ -1.34
snR49snR49 PSD2P53037 1138 aaKnown RBP6.7□□□□□ -1.34
snR49snR49 FKH1P40466 484 aa6.69□□□□□ -1.34
snR49snR49 TFA1P36100 482 aa6.66□□□□□ -1.34
snR49snR49 PIB1Q06651 286 aa6.66□□□□□ -1.34
snR49snR49 YJL171CP46992 396 aa6.65□□□□□ -1.34
snR49snR49 MRM1P25270 412 aa6.64□□□□□ -1.35
snR49snR49 ULI1P43604 169 aa6.63□□□□□ -1.35
snR49snR49 IOC2Q12072 812 aa6.63□□□□□ -1.35
snR49snR49 LDB19Q12502 818 aa6.63□□□□□ -1.35
snR49snR49 SSP1P38871 571 aa6.56□□□□□ -1.36
snR49snR49 MSB4Q12317 492 aa6.55□□□□□ -1.36
snR49snR49 BMT6Q12291 365 aa6.54□□□□□ -1.36
snR49snR49 ARP8Q12386 881 aaKnown RBP RIP-Chip data6.53□□□□□ -1.36not detected
snR49snR49 VPS29P38759 282 aa6.52□□□□□ -1.37
snR49snR49 EAP1P36041 632 aaKnown RBP6.51□□□□□ -1.37
snR49snR49 YOL036WQ08206 761 aa6.51□□□□□ -1.37
snR49snR49 DBP1P24784 617 aaKnown RBP6.5□□□□□ -1.37
snR49snR49 SET4P42948 560 aa6.5□□□□□ -1.37
snR49snR49 YMR1P47147 688 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
snR49snR49 CST9Q06032 482 aa6.5□□□□□ -1.37
snR49snR49 TRP5P00931 707 aaKnown RBP6.48□□□□□ -1.37
snR49snR49 RTG1P32607 177 aa6.48□□□□□ -1.37
snR49snR49 YFR006WP43590 535 aa6.47□□□□□ -1.37
snR49snR49 RTG3P38165 486 aa6.46□□□□□ -1.38
snR49snR49 NCR1Q12200 1170 aa6.45□□□□□ -1.38
snR49snR49 VMA1P17255 1071 aaKnown RBP6.44□□□□□ -1.38
snR49snR49 STS1P38637 319 aa6.44□□□□□ -1.38
snR49snR49 MGA2P40578 1113 aa6.43□□□□□ -1.38
snR49snR49 YNL035CP53962 389 aaKnown RBP6.42□□□□□ -1.38
snR49snR49 SAM3Q08986 587 aa6.42□□□□□ -1.38
snR49snR49 SEC61P32915 480 aa6.4□□□□□ -1.38
snR49snR49 RCR1P38212 213 aa6.38□□□□□ -1.39
snR49snR49 DAN4P47179 1161 aa6.33□□□□□ -1.4
snR49snR49 TFG1P41895 735 aaPredicted RBP6.31□□□□□ -1.4
snR49snR49 JIP4Q03361 876 aa6.3□□□□□ -1.4
snR49snR49 GYP5Q12344 894 aa6.3□□□□□ -1.4
snR49snR49 SAP30P38429 201 aa6.29□□□□□ -1.4
snR49snR49 ABP1P15891 592 aaKnown RBP6.28□□□□□ -1.4
snR49snR49 DCW1P36091 449 aa6.27□□□□□ -1.41
snR49snR49 HTA1P04911 132 aaKnown RBP6.26□□□□□ -1.41
snR49snR49 HTA2P04912 132 aa6.26□□□□□ -1.41
snR49snR49 YDL129WQ07555 291 aa6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms