Protein–RNA interactions for Protein: Q8TGJ3

KSH1, Protein kish, yeastyeast

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
KSH1Q8TGJ3 NSR1YGR159C 1245 nt12.62□□□□□ -0.39
KSH1Q8TGJ3 YML009W-BYML009W-B 477 nt12.51□□□□□ -0.41
KSH1Q8TGJ3 NOP1YDL014W 984 nt12.31□□□□□ -0.44
KSH1Q8TGJ3 SSA3YBL075C 1950 nt11.24□□□□□ -0.61
KSH1Q8TGJ3 YKL036CYKL036C 393 nt11.19□□□□□ -0.62
KSH1Q8TGJ3 MDJ1YFL016C 1536 nt11.08□□□□□ -0.64
KSH1Q8TGJ3 Q0297Q0297 156 nt10.67□□□□□ -0.7
KSH1Q8TGJ3 SRX1YKL086W 384 nt10.67□□□□□ -0.7
KSH1Q8TGJ3 YJL027CYJL027C 417 nt10.41□□□□□ -0.74
KSH1Q8TGJ3 YCR051WYCR051W 669 nt10.07□□□□□ -0.8
KSH1Q8TGJ3 SCS3YGL126W 1143 nt10.04□□□□□ -0.8
KSH1Q8TGJ3 DBP2YNL112W 1641 nt9.76□□□□□ -0.85
KSH1Q8TGJ3 NVJ2YPR091C 2313 nt9.65□□□□□ -0.86
KSH1Q8TGJ3 PAC11YDR488C 1602 nt9.65□□□□□ -0.86
KSH1Q8TGJ3 YOL085CYOL085C 342 nt9.64□□□□□ -0.87
KSH1Q8TGJ3 YBR190WYBR190W 312 nt9.64□□□□□ -0.87
KSH1Q8TGJ3 TRN1tP(UGG)A 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 SUF9tP(UGG)F 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 SUF8tP(UGG)H 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 tP(UGG)LtP(UGG)L 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 SUF7tP(UGG)M 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 tP(UGG)N1tP(UGG)N1 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 tP(UGG)N2tP(UGG)N2 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 tP(UGG)O1tP(UGG)O1 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 SUF11tP(UGG)O2 72 nt9.63□□□□□ -0.87
KSH1Q8TGJ3 FPS1YLL043W 2010 nt9.6□□□□□ -0.87
KSH1Q8TGJ3 RPP1BYDL130W 321 nt9.56□□□□□ -0.88
KSH1Q8TGJ3 CCC1YLR220W 969 nt9.5□□□□□ -0.89
KSH1Q8TGJ3 SSA1YAL005C 1929 nt9.48□□□□□ -0.89
KSH1Q8TGJ3 PKP1YIL042C 1185 nt9.4□□□□□ -0.9
KSH1Q8TGJ3 RVS167YDR388W 1449 nt9.39□□□□□ -0.91
KSH1Q8TGJ3 RTC3YHR087W 336 nt9.37□□□□□ -0.91
KSH1Q8TGJ3 SSA4YER103W 1929 nt9.33□□□□□ -0.92
KSH1Q8TGJ3 BDF1YLR399C 2061 nt9.14□□□□□ -0.95
KSH1Q8TGJ3 tP(UGG)O3tP(UGG)O3 72 nt9.1□□□□□ -0.95
KSH1Q8TGJ3 SCR1SCR1 522 nt9.1□□□□□ -0.95
KSH1Q8TGJ3 SPT5YML010W 3192 nt9.08□□□□□ -0.96
KSH1Q8TGJ3 SCJ1YMR214W 1134 nt9.06□□□□□ -0.96
KSH1Q8TGJ3 PET122YER153C 765 nt9.05□□□□□ -0.96
KSH1Q8TGJ3 ATS1YAL020C 1002 nt9□□□□□ -0.97
KSH1Q8TGJ3 SHR5YOL110W 714 nt8.97□□□□□ -0.97
KSH1Q8TGJ3 TAT1YBR069C 1860 nt8.97□□□□□ -0.97
KSH1Q8TGJ3 PUT4YOR348C 1884 nt8.9□□□□□ -0.98
KSH1Q8TGJ3 YDJ1YNL064C 1230 nt8.88□□□□□ -0.99
KSH1Q8TGJ3 UME6YDR207C 2511 nt8.87□□□□□ -0.99
KSH1Q8TGJ3 RRN5YLR141W 1092 nt8.81□□□□□ -1
KSH1Q8TGJ3 RPN10YHR200W 807 nt8.73□□□□□ -1.01
KSH1Q8TGJ3 URN1YPR152C 1398 nt8.72□□□□□ -1.01
KSH1Q8TGJ3 OPI9YLR338W 858 nt8.64□□□□□ -1.03
KSH1Q8TGJ3 YER088W-BYER088W-B 147 nt8.63□□□□□ -1.03
KSH1Q8TGJ3 YNL208WYNL208W 600 nt8.62□□□□□ -1.03
KSH1Q8TGJ3 RSB1YOR049C 1065 nt8.62□□□□□ -1.03
KSH1Q8TGJ3 DEP1YAL013W 1218 nt8.61□□□□□ -1.03
KSH1Q8TGJ3 GAR1YHR089C 618 nt8.58□□□□□ -1.04
KSH1Q8TGJ3 BSC6YOL137W 1494 nt8.55□□□□□ -1.04
KSH1Q8TGJ3 SAH1YER043C 1350 nt8.52□□□□□ -1.05
KSH1Q8TGJ3 POA1YBR022W 534 nt8.5□□□□□ -1.05
KSH1Q8TGJ3 ARE1YCR048W 1833 nt8.49□□□□□ -1.05
KSH1Q8TGJ3 PUN1YLR414C 792 nt8.45□□□□□ -1.06
KSH1Q8TGJ3 YHR049C-AYHR049C-A 297 nt8.4□□□□□ -1.06
KSH1Q8TGJ3 RDN37-1RDN37-1 5354 nt8.4□□□□□ -1.06
KSH1Q8TGJ3 RDN37-2RDN37-2 5354 nt8.4□□□□□ -1.06
KSH1Q8TGJ3 PST2YDR032C 597 nt8.35□□□□□ -1.07
KSH1Q8TGJ3 YJR018WYJR018W 363 nt8.35□□□□□ -1.07
KSH1Q8TGJ3 MCH5YOR306C 1566 nt8.35□□□□□ -1.07
KSH1Q8TGJ3 TIR1YER011W 765 nt8.34□□□□□ -1.07
KSH1Q8TGJ3 YJL225CYJL225C 5277 nt8.34□□□□□ -1.07
KSH1Q8TGJ3 BOR1YNL275W 1731 nt8.32□□□□□ -1.08
KSH1Q8TGJ3 GUT2YIL155C 1950 nt8.32□□□□□ -1.08
KSH1Q8TGJ3 RPM1RPM1 483 nt8.32□□□□□ -1.08
KSH1Q8TGJ3 PTC2YER089C 1395 nt8.26□□□□□ -1.09
KSH1Q8TGJ3 RPP2BYDR382W 333 nt8.25□□□□□ -1.09
KSH1Q8TGJ3 NAB2YGL122C 1578 nt8.24□□□□□ -1.09
KSH1Q8TGJ3 BUD23YCR047C 828 nt8.22□□□□□ -1.09
KSH1Q8TGJ3 PCH2YBR186W 1695 nt8.18□□□□□ -1.1
KSH1Q8TGJ3 MEP2YNL142W 1500 nt8.16□□□□□ -1.1
KSH1Q8TGJ3 INM2YDR287W 879 nt8.15□□□□□ -1.1
KSH1Q8TGJ3 YBR220CYBR220C 1683 nt8.12□□□□□ -1.11
KSH1Q8TGJ3 DAL1YIR027C 1383 nt8.1□□□□□ -1.11
KSH1Q8TGJ3 SEC11YIR022W 504 nt8.03□□□□□ -1.12
KSH1Q8TGJ3 YJR120WYJR120W 351 nt8.03□□□□□ -1.12
KSH1Q8TGJ3 ALG12YNR030W 1656 nt8.02□□□□□ -1.13
KSH1Q8TGJ3 PIB2YGL023C 1908 nt8.02□□□□□ -1.13
KSH1Q8TGJ3 FPR4YLR449W 1179 nt8.02□□□□□ -1.13
KSH1Q8TGJ3 YKL097CYKL097C 411 nt8.01□□□□□ -1.13
KSH1Q8TGJ3 BDH2YAL061W 1254 nt8.01□□□□□ -1.13
KSH1Q8TGJ3 YGR021WYGR021W 873 nt7.99□□□□□ -1.13
KSH1Q8TGJ3 DCW1YKL046C 1350 nt7.98□□□□□ -1.13
KSH1Q8TGJ3 FIS1YIL065C 468 nt7.98□□□□□ -1.13
KSH1Q8TGJ3 PHO4YFR034C 939 nt7.96□□□□□ -1.14
KSH1Q8TGJ3 SHU1YHL006C 453 nt7.96□□□□□ -1.14
KSH1Q8TGJ3 YBL100CYBL100C 315 nt7.96□□□□□ -1.14
KSH1Q8TGJ3 LSM3YLR438C-A 270 nt7.95□□□□□ -1.14
KSH1Q8TGJ3 YMR090WYMR090W 684 nt7.91□□□□□ -1.14
KSH1Q8TGJ3 TRM9YML014W 840 nt7.9□□□□□ -1.14
KSH1Q8TGJ3 WWM1YFL010C 636 nt7.89□□□□□ -1.15
KSH1Q8TGJ3 YFL021C-AYFL021C-A 855 nt7.89□□□□□ -1.15
KSH1Q8TGJ3 SRB2YHR041C 633 nt7.86□□□□□ -1.15
KSH1Q8TGJ3 FUN26YAL022C 1554 nt7.85□□□□□ -1.15
KSH1Q8TGJ3 EMI2YDR516C 1503 nt7.84□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms