Protein–RNA interactions for Protein: Q04304

YMR090W, UPF0659 protein YMR090W, yeast

Known RBP Predictions only

Length 227 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR090W	Q04304	NSR1	YGR159C	1245 nt		16.76	■□□□□ 0.27
YMR090W	Q04304	YML009W-B	YML009W-B	477 nt		16.45	■□□□□ 0.22
YMR090W	Q04304	NOP1	YDL014W	984 nt		15.88	■□□□□ 0.13
YMR090W	Q04304	MDJ1	YFL016C	1536 nt		15.21	■□□□□ 0.03
YMR090W	Q04304	YKL036C	YKL036C	393 nt		14.22	□□□□□ -0.13
YMR090W	Q04304	YJL027C	YJL027C	417 nt		14.05	□□□□□ -0.16
YMR090W	Q04304	SRX1	YKL086W	384 nt		13.84	□□□□□ -0.19
YMR090W	Q04304	Q0297	Q0297	156 nt		13.74	□□□□□ -0.21
YMR090W	Q04304	DBP2	YNL112W	1641 nt		13.28	□□□□□ -0.28
YMR090W	Q04304	YBR190W	YBR190W	312 nt		13.14	□□□□□ -0.31
YMR090W	Q04304	YCR051W	YCR051W	669 nt		13.07	□□□□□ -0.32
YMR090W	Q04304	RTC3	YHR087W	336 nt		12.79	□□□□□ -0.36
YMR090W	Q04304	TRN1	tP(UGG)A	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	SUF9	tP(UGG)F	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	SUF8	tP(UGG)H	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	tP(UGG)L	tP(UGG)L	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	SUF7	tP(UGG)M	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	tP(UGG)N1	tP(UGG)N1	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	tP(UGG)N2	tP(UGG)N2	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	tP(UGG)O1	tP(UGG)O1	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	SUF11	tP(UGG)O2	72 nt		12.76	□□□□□ -0.37
YMR090W	Q04304	SCS3	YGL126W	1143 nt		12.69	□□□□□ -0.38
YMR090W	Q04304	CCC1	YLR220W	969 nt		12.57	□□□□□ -0.4
YMR090W	Q04304	RVS167	YDR388W	1449 nt		12.48	□□□□□ -0.41
YMR090W	Q04304	SSA3	YBL075C	1950 nt		12.44	□□□□□ -0.42
YMR090W	Q04304	RPP1B	YDL130W	321 nt		12.31	□□□□□ -0.44
YMR090W	Q04304	YOL085C	YOL085C	342 nt		12.3	□□□□□ -0.44
YMR090W	Q04304	SCJ1	YMR214W	1134 nt		12.24	□□□□□ -0.45
YMR090W	Q04304	PUT4	YOR348C	1884 nt		12.23	□□□□□ -0.45
YMR090W	Q04304	PKP1	YIL042C	1185 nt		12.11	□□□□□ -0.47
YMR090W	Q04304	SHR5	YOL110W	714 nt		11.92	□□□□□ -0.5
YMR090W	Q04304	tP(UGG)O3	tP(UGG)O3	72 nt		11.91	□□□□□ -0.5
YMR090W	Q04304	ARE1	YCR048W	1833 nt		11.87	□□□□□ -0.51
YMR090W	Q04304	URN1	YPR152C	1398 nt		11.81	□□□□□ -0.52
YMR090W	Q04304	PET122	YER153C	765 nt		11.78	□□□□□ -0.52
YMR090W	Q04304	POA1	YBR022W	534 nt		11.78	□□□□□ -0.52
YMR090W	Q04304	OPI9	YLR338W	858 nt		11.76	□□□□□ -0.53
YMR090W	Q04304	SAH1	YER043C	1350 nt		11.75	□□□□□ -0.53
YMR090W	Q04304	YHR049C-A	YHR049C-A	297 nt		11.72	□□□□□ -0.53
YMR090W	Q04304	DEP1	YAL013W	1218 nt		11.64	□□□□□ -0.55
YMR090W	Q04304	BSC6	YOL137W	1494 nt		11.63	□□□□□ -0.55
YMR090W	Q04304	RPN10	YHR200W	807 nt		11.62	□□□□□ -0.55
YMR090W	Q04304	SCR1	SCR1	522 nt		11.61	□□□□□ -0.55
YMR090W	Q04304	YDJ1	YNL064C	1230 nt		11.57	□□□□□ -0.56
YMR090W	Q04304	YNL208W	YNL208W	600 nt		11.5	□□□□□ -0.57
YMR090W	Q04304	PUN1	YLR414C	792 nt		11.45	□□□□□ -0.58
YMR090W	Q04304	SPT5	YML010W	3192 nt		11.4	□□□□□ -0.58
YMR090W	Q04304	BUD23	YCR047C	828 nt		11.4	□□□□□ -0.58
YMR090W	Q04304	RRN5	YLR141W	1092 nt		11.39	□□□□□ -0.59
YMR090W	Q04304	PTC2	YER089C	1395 nt		11.32	□□□□□ -0.6
YMR090W	Q04304	GAR1	YHR089C	618 nt		11.32	□□□□□ -0.6
YMR090W	Q04304	NAB2	YGL122C	1578 nt		11.27	□□□□□ -0.61
YMR090W	Q04304	YJR018W	YJR018W	363 nt		11.26	□□□□□ -0.61
YMR090W	Q04304	ATS1	YAL020C	1002 nt		11.23	□□□□□ -0.61
YMR090W	Q04304	SSA4	YER103W	1929 nt		11.2	□□□□□ -0.62
YMR090W	Q04304	YER088W-B	YER088W-B	147 nt		11.17	□□□□□ -0.62
YMR090W	Q04304	DAL1	YIR027C	1383 nt		11.04	□□□□□ -0.64
YMR090W	Q04304	FIS1	YIL065C	468 nt		11.04	□□□□□ -0.64
YMR090W	Q04304	RSB1	YOR049C	1065 nt		11.04	□□□□□ -0.64
YMR090W	Q04304	TIR1	YER011W	765 nt		10.99	□□□□□ -0.65
YMR090W	Q04304	MEP2	YNL142W	1500 nt		10.98	□□□□□ -0.65
YMR090W	Q04304	RPP2B	YDR382W	333 nt		10.96	□□□□□ -0.65
YMR090W	Q04304	INM2	YDR287W	879 nt		10.95	□□□□□ -0.66
YMR090W	Q04304	YJR120W	YJR120W	351 nt		10.95	□□□□□ -0.66
YMR090W	Q04304	FPR4	YLR449W	1179 nt		10.95	□□□□□ -0.66
YMR090W	Q04304	PHO4	YFR034C	939 nt		10.92	□□□□□ -0.66
YMR090W	Q04304	SSA1	YAL005C	1929 nt		10.92	□□□□□ -0.66
YMR090W	Q04304	YPS1	YLR120C	1710 nt		10.87	□□□□□ -0.67
YMR090W	Q04304	BDF1	YLR399C	2061 nt		10.81	□□□□□ -0.68
YMR090W	Q04304	YHR165W-A	YHR165W-A	312 nt		10.76	□□□□□ -0.69
YMR090W	Q04304	YBL100C	YBL100C	315 nt		10.75	□□□□□ -0.69
YMR090W	Q04304	DCW1	YKL046C	1350 nt		10.74	□□□□□ -0.69
YMR090W	Q04304	YDR095C	YDR095C	411 nt		10.73	□□□□□ -0.69
YMR090W	Q04304	TAT1	YBR069C	1860 nt		10.68	□□□□□ -0.7
YMR090W	Q04304	YMR090W	YMR090W	684 nt		10.66	□□□□□ -0.7
YMR090W	Q04304	BDH2	YAL061W	1254 nt		10.65	□□□□□ -0.7
YMR090W	Q04304	EMI2	YDR516C	1503 nt		10.63	□□□□□ -0.71
YMR090W	Q04304	FUN26	YAL022C	1554 nt		10.6	□□□□□ -0.71
YMR090W	Q04304	SRB2	YHR041C	633 nt		10.58	□□□□□ -0.72
YMR090W	Q04304	YBR220C	YBR220C	1683 nt		10.57	□□□□□ -0.72
YMR090W	Q04304	ALF1	YNL148C	765 nt		10.56	□□□□□ -0.72
YMR090W	Q04304	YDL221W	YDL221W	552 nt		10.53	□□□□□ -0.72
YMR090W	Q04304	RPP2A	YOL039W	321 nt		10.53	□□□□□ -0.72
YMR090W	Q04304	TRM9	YML014W	840 nt		10.52	□□□□□ -0.73
YMR090W	Q04304	PTP1	YDL230W	1008 nt		10.49	□□□□□ -0.73
YMR090W	Q04304	SDH1	YKL148C	1923 nt		10.48	□□□□□ -0.73
YMR090W	Q04304	PST2	YDR032C	597 nt		10.47	□□□□□ -0.73
YMR090W	Q04304	CAC2	YML102W	1407 nt		10.46	□□□□□ -0.74
YMR090W	Q04304	LSM3	YLR438C-A	270 nt		10.45	□□□□□ -0.74
YMR090W	Q04304	CCT6	YDR188W	1641 nt		10.44	□□□□□ -0.74
YMR090W	Q04304	YJL225C	YJL225C	5277 nt		10.44	□□□□□ -0.74
YMR090W	Q04304	SUF2	tP(AGG)C	72 nt		10.42	□□□□□ -0.74
YMR090W	Q04304	SUF10	tP(AGG)N	72 nt		10.42	□□□□□ -0.74
YMR090W	Q04304	SIS1	YNL007C	1059 nt		10.4	□□□□□ -0.74
YMR090W	Q04304	WWM1	YFL010C	636 nt		10.39	□□□□□ -0.75
YMR090W	Q04304	SCC4	YER147C	1875 nt		10.36	□□□□□ -0.75
YMR090W	Q04304	SEC11	YIR022W	504 nt		10.33	□□□□□ -0.76
YMR090W	Q04304	IRC15	YPL017C	1500 nt		10.32	□□□□□ -0.76
YMR090W	Q04304	YFL021C-A	YFL021C-A	855 nt		10.3	□□□□□ -0.76
YMR090W	Q04304	YGR021W	YGR021W	873 nt		10.29	□□□□□ -0.76

Retrieved 100 of 7,029 protein–RNA pairs in 7 ms