RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 CSF1Q12150 2958 aa-4.07□□□□□ -3.06
snR38snR38 YMR103CQ04436 120 aa-4.07□□□□□ -3.06
snR38snR38 RSM19P53733 91 aaPredicted RBP-4.09□□□□□ -3.06
snR38snR38 FIG2P25653 1609 aa-4.1□□□□□ -3.07
snR38snR38 FYV7Q12247 151 aa-4.11□□□□□ -3.07
snR38snR38 ATP17Q06405 101 aa-4.12□□□□□ -3.07
snR38snR38 YLR146W-AQ2V2P1 62 aa-4.12□□□□□ -3.07
snR38snR38 YLR099W-AQ3E798 87 aa-4.14□□□□□ -3.07
snR38snR38 HMRA1P0CY11 126 aa-4.15□□□□□ -3.07
snR38snR38 YBR200W-AQ3E755 54 aa-4.15□□□□□ -3.07
snR38snR38 PDR11P40550 1411 aa-4.15□□□□□ -3.07
snR38snR38 YOR011W-AQ3E807 68 aa-4.16□□□□□ -3.08
snR38snR38 NOP10Q6Q547 58 aaPredicted RBP-4.16□□□□□ -3.08
snR38snR38 QCR6P00127 147 aa-4.18□□□□□ -3.08
snR38snR38 VMA7P39111 118 aa-4.18□□□□□ -3.08
snR38snR38 YDR042CQ03205 200 aa-4.18□□□□□ -3.08
snR38snR38 PDR10P51533 1564 aa-4.19□□□□□ -3.08
snR38snR38 RPS27BP38711 82 aa-4.2□□□□□ -3.08
snR38snR38 YMR090WQ04304 227 aaKnown RBP-4.2□□□□□ -3.08
snR38snR38 YGR146C-AQ8TGT9 53 aa-4.2□□□□□ -3.08
snR38snR38 YOR192C-CQ3E736 78 aa-4.21□□□□□ -3.08
snR38snR38 MHF2Q3E829 80 aa-4.21□□□□□ -3.08
snR38snR38 YPL225WQ08971 146 aaKnown RBP-4.22□□□□□ -3.08
snR38snR38 POL1P13382 1468 aa-4.26□□□□□ -3.09
snR38snR38 HAP1P0CE41 1502 aa-4.26□□□□□ -3.09
snR38snR38 YIL156W-BQ2V2P4 73 aa-4.27□□□□□ -3.09
snR38snR38 DYN2Q02647 92 aa-4.28□□□□□ -3.09
snR38snR38 TRA1P38811 3744 aa-4.3□□□□□ -3.1
snR38snR38 IRA1P18963 3092 aa-4.3□□□□□ -3.1
snR38snR38 YBL039W-BP0C268 59 aa-4.3□□□□□ -3.1
snR38snR38 GEA1P47102 1408 aaPredicted RBP-4.32□□□□□ -3.1
snR38snR38 RPA190P10964 1664 aaKnown RBP-4.32□□□□□ -3.1
snR38snR38 WIP1Q2V2P8 89 aa-4.33□□□□□ -3.1
snR38snR38 RRT15Q3E811 62 aa-4.33□□□□□ -3.1
snR38snR38 FKS3Q04952 1785 aa-4.35□□□□□ -3.11
snR38snR38 YDL022C-AP0C5L6 82 aa-4.36□□□□□ -3.11
snR38snR38 YML054C-AQ3E809 52 aa-4.36□□□□□ -3.11
snR38snR38 KSH1Q8TGJ3 72 aa-4.36□□□□□ -3.11
snR38snR38 SPP41P38904 1435 aa-4.37□□□□□ -3.11
snR38snR38 THO2P53552 1597 aaKnown RBP-4.37□□□□□ -3.11
snR38snR38 IRA2P19158 3079 aa-4.37□□□□□ -3.11
snR38snR38 YER039C-AP0CD97 72 aa-4.4□□□□□ -3.11
snR38snR38 YOR105WQ08504 108 aa-4.4□□□□□ -3.11
snR38snR38 YBR230W-AQ3E762 66 aa-4.4□□□□□ -3.11
snR38snR38 SUS1Q6WNK7 96 aa-4.4□□□□□ -3.11
snR38snR38 CHD1P32657 1468 aa-4.41□□□□□ -3.12
snR38snR38 YOR314WQ12506 109 aa-4.41□□□□□ -3.12
snR38snR38 GDB1Q06625 1536 aa-4.41□□□□□ -3.12
snR38snR38 YMR082CQ04276 118 aa-4.44□□□□□ -3.12
snR38snR38 REV3P14284 1504 aa-4.47□□□□□ -3.13
snR38snR38 MSL1P40567 111 aaPredicted RBP-4.49□□□□□ -3.13
snR38snR38 YKL065W-AQ2V2P2 73 aa-4.49□□□□□ -3.13
snR38snR38 DNF1P32660 1571 aa-4.49□□□□□ -3.13
snR38snR38 GEA2P39993 1459 aaKnown RBP-4.51□□□□□ -3.13
snR38snR38 YSP2Q06681 1438 aa-4.52□□□□□ -3.13
snR38snR38 SIN3P22579 1536 aa-4.52□□□□□ -3.13
snR38snR38 SPI1P40092 148 aa-4.53□□□□□ -3.13
snR38snR38 SWR1Q05471 1514 aa-4.55□□□□□ -3.14
snR38snR38 YMR105W-AQ8TGS8 64 aa-4.55□□□□□ -3.14
snR38snR38 YGL194C-AQ2V2P6 80 aa-4.57□□□□□ -3.14
snR38snR38 TSC11P40061 1430 aa-4.63□□□□□ -3.15
snR38snR38 YOR032W-AQ8TGS1 66 aa-4.65□□□□□ -3.15
snR38snR38 RPL29P05747 59 aaPredicted RBP-4.67□□□□□ -3.16
snR38snR38 HUB1Q6Q546 73 aa-4.67□□□□□ -3.16
snR38snR38 TIM12P32830 109 aa-4.68□□□□□ -3.16
snR38snR38 RPS12P48589 143 aaKnown RBP-4.69□□□□□ -3.16
snR38snR38 YOR304C-AO14468 76 aa-4.7□□□□□ -3.16
snR38snR38 QCR9P22289 66 aa-4.71□□□□□ -3.16
snR38snR38 MDS3P53094 1487 aa-4.72□□□□□ -3.16
snR38snR38 YDR034C-AP0C289 58 aa-4.72□□□□□ -3.17
snR38snR38 SSS1P35179 80 aa-4.72□□□□□ -3.17
snR38snR38 YMR175W-AQ3E766 64 aa-4.72□□□□□ -3.17
snR38snR38 PAU7P39545 55 aa-4.73□□□□□ -3.17
snR38snR38 SNQ2P32568 1501 aaKnown RBP-4.73□□□□□ -3.17
snR38snR38 YGR035W-AQ45U48 73 aa-4.74□□□□□ -3.17
snR38snR38 PDR12Q02785 1511 aa-4.75□□□□□ -3.17
snR38snR38 YGR121W-AQ3E816 71 aa-4.75□□□□□ -3.17
snR38snR38 TY1B-DR4Q07793 1604 aa-4.77□□□□□ -3.17
snR38snR38 YPR145C-AQ2V2P0 78 aa-4.8□□□□□ -3.18
snR38snR38 SWM2P40342 146 aa-4.82□□□□□ -3.18
snR38snR38 YOR093CQ12275 1648 aa-4.83□□□□□ -3.18
snR38snR38 YCL001W-BQ96VH2 84 aa-4.83□□□□□ -3.18
snR38snR38 YER137CP40083 148 aaKnown RBP-4.84□□□□□ -3.18
snR38snR38 MMS22Q06164 1454 aa-4.84□□□□□ -3.18
snR38snR38 ESP1Q03018 1630 aa-4.86□□□□□ -3.19
snR38snR38 YOR316C-AQ3E806 69 aa-4.87□□□□□ -3.19
snR38snR38 DNF2Q12675 1612 aa-4.88□□□□□ -3.19
snR38snR38 PDR15Q04182 1529 aaKnown RBP-4.88□□□□□ -3.19
snR38snR38 MLP1Q02455 1875 aaKnown RBP-4.9□□□□□ -3.19
snR38snR38 FLO1P32768 1537 aa-4.9□□□□□ -3.19
snR38snR38 ARO1P08566 1588 aaKnown RBP-4.91□□□□□ -3.19
snR38snR38 YLR157W-DP0CE99 70 aa-4.93□□□□□ -3.2
snR38snR38 RRP5Q05022 1729 aaKnown RBP-4.95□□□□□ -3.2
snR38snR38 VPS13Q07878 3144 aa-4.96□□□□□ -3.2
snR38snR38 RPS30AP0CX33 63 aaKnown RBP-5□□□□□ -3.21
snR38snR38 RPS30BP0CX34 63 aaKnown RBP-5□□□□□ -3.21
snR38snR38 PDR5P33302 1511 aaKnown RBP-5.01□□□□□ -3.21
snR38snR38 BCK1Q01389 1478 aa-5.01□□□□□ -3.21
snR38snR38 YHR073W-AP0C5N7 58 aa-5.04□□□□□ -3.22
snR38snR38 IQG1Q12280 1495 aa-5.06□□□□□ -3.22
Retrieved 100 of 5,963 RNA–protein pairs in 58.3 ms