Protein–RNA interactions for Protein: P38711

RPS27B, 40S ribosomal protein S27-B, yeastyeast

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS27BP38711 YML009W-BYML009W-B 477 nt19.21■□□□□ 0.67
RPS27BP38711 NSR1YGR159C 1245 nt18.96■□□□□ 0.63
RPS27BP38711 NOP1YDL014W 984 nt18.71■□□□□ 0.59
RPS27BP38711 YKL036CYKL036C 393 nt17.41■□□□□ 0.38
RPS27BP38711 MDJ1YFL016C 1536 nt16.72■□□□□ 0.27
RPS27BP38711 Q0297Q0297 156 nt16.44■□□□□ 0.22
RPS27BP38711 SRX1YKL086W 384 nt16.36■□□□□ 0.21
RPS27BP38711 YJL027CYJL027C 417 nt16.29■□□□□ 0.2
RPS27BP38711 SCS3YGL126W 1143 nt15.93■□□□□ 0.14
RPS27BP38711 YCR051WYCR051W 669 nt15.54■□□□□ 0.08
RPS27BP38711 YOL085CYOL085C 342 nt15.08■□□□□ 0
RPS27BP38711 DBP2YNL112W 1641 nt14.86□□□□□ -0.03
RPS27BP38711 PKP1YIL042C 1185 nt14.84□□□□□ -0.03
RPS27BP38711 RPP1BYDL130W 321 nt14.75□□□□□ -0.05
RPS27BP38711 TRN1tP(UGG)A 72 nt14.72□□□□□ -0.05
RPS27BP38711 SUF9tP(UGG)F 72 nt14.72□□□□□ -0.05
RPS27BP38711 SUF8tP(UGG)H 72 nt14.72□□□□□ -0.05
RPS27BP38711 tP(UGG)LtP(UGG)L 72 nt14.72□□□□□ -0.05
RPS27BP38711 SUF7tP(UGG)M 72 nt14.72□□□□□ -0.05
RPS27BP38711 tP(UGG)N1tP(UGG)N1 72 nt14.72□□□□□ -0.05
RPS27BP38711 tP(UGG)N2tP(UGG)N2 72 nt14.72□□□□□ -0.05
RPS27BP38711 tP(UGG)O1tP(UGG)O1 72 nt14.72□□□□□ -0.05
RPS27BP38711 SUF11tP(UGG)O2 72 nt14.72□□□□□ -0.05
RPS27BP38711 CCC1YLR220W 969 nt14.58□□□□□ -0.08
RPS27BP38711 ATS1YAL020C 1002 nt14.28□□□□□ -0.12
RPS27BP38711 SCJ1YMR214W 1134 nt14.26□□□□□ -0.13
RPS27BP38711 YBR190WYBR190W 312 nt14.2□□□□□ -0.14
RPS27BP38711 PET122YER153C 765 nt14.08□□□□□ -0.16
RPS27BP38711 RVS167YDR388W 1449 nt13.98□□□□□ -0.17
RPS27BP38711 tP(UGG)O3tP(UGG)O3 72 nt13.97□□□□□ -0.17
RPS27BP38711 SCR1SCR1 522 nt13.96□□□□□ -0.17
RPS27BP38711 RTC3YHR087W 336 nt13.9□□□□□ -0.18
RPS27BP38711 RRN5YLR141W 1092 nt13.69□□□□□ -0.22
RPS27BP38711 SHR5YOL110W 714 nt13.53□□□□□ -0.24
RPS27BP38711 YDJ1YNL064C 1230 nt13.5□□□□□ -0.25
RPS27BP38711 RSB1YOR049C 1065 nt13.45□□□□□ -0.26
RPS27BP38711 YER088W-BYER088W-B 147 nt13.42□□□□□ -0.26
RPS27BP38711 PST2YDR032C 597 nt13.2□□□□□ -0.3
RPS27BP38711 GAR1YHR089C 618 nt13.19□□□□□ -0.3
RPS27BP38711 DEP1YAL013W 1218 nt13.11□□□□□ -0.31
RPS27BP38711 URN1YPR152C 1398 nt13.07□□□□□ -0.32
RPS27BP38711 YNL208WYNL208W 600 nt12.91□□□□□ -0.34
RPS27BP38711 RPN10YHR200W 807 nt12.89□□□□□ -0.35
RPS27BP38711 OPI9YLR338W 858 nt12.85□□□□□ -0.35
RPS27BP38711 PUT4YOR348C 1884 nt12.81□□□□□ -0.36
RPS27BP38711 YKL097CYKL097C 411 nt12.75□□□□□ -0.37
RPS27BP38711 SAH1YER043C 1350 nt12.74□□□□□ -0.37
RPS27BP38711 TIR1YER011W 765 nt12.74□□□□□ -0.37
RPS27BP38711 SHU1YHL006C 453 nt12.64□□□□□ -0.39
RPS27BP38711 ARE1YCR048W 1833 nt12.63□□□□□ -0.39
RPS27BP38711 SSA1YAL005C 1929 nt12.58□□□□□ -0.4
RPS27BP38711 YJR018WYJR018W 363 nt12.48□□□□□ -0.41
RPS27BP38711 PUN1YLR414C 792 nt12.47□□□□□ -0.41
RPS27BP38711 YHR049C-AYHR049C-A 297 nt12.45□□□□□ -0.42
RPS27BP38711 SRB2YHR041C 633 nt12.41□□□□□ -0.42
RPS27BP38711 YAL037C-BYAL037C-B 975 nt12.41□□□□□ -0.42
RPS27BP38711 POA1YBR022W 534 nt12.41□□□□□ -0.42
RPS27BP38711 YJR120WYJR120W 351 nt12.33□□□□□ -0.44
RPS27BP38711 PTC2YER089C 1395 nt12.3□□□□□ -0.44
RPS27BP38711 RPP2BYDR382W 333 nt12.24□□□□□ -0.45
RPS27BP38711 YOR139CYOR139C 393 nt12.22□□□□□ -0.45
RPS27BP38711 WWM1YFL010C 636 nt12.21□□□□□ -0.45
RPS27BP38711 BUD23YCR047C 828 nt12.18□□□□□ -0.46
RPS27BP38711 YGR021WYGR021W 873 nt12.16□□□□□ -0.46
RPS27BP38711 HOM6YJR139C 1080 nt12.15□□□□□ -0.46
RPS27BP38711 NAB2YGL122C 1578 nt12.13□□□□□ -0.47
RPS27BP38711 MNP1YGL068W 585 nt12.12□□□□□ -0.47
RPS27BP38711 BSC6YOL137W 1494 nt12.11□□□□□ -0.47
RPS27BP38711 NPL3YDR432W 1245 nt12.08□□□□□ -0.48
RPS27BP38711 BDH2YAL061W 1254 nt12.04□□□□□ -0.48
RPS27BP38711 SSA3YBL075C 1950 nt12.04□□□□□ -0.48
RPS27BP38711 INM2YDR287W 879 nt12□□□□□ -0.49
RPS27BP38711 YFL021C-AYFL021C-A 855 nt12□□□□□ -0.49
RPS27BP38711 DAL1YIR027C 1383 nt11.99□□□□□ -0.49
RPS27BP38711 FIS1YIL065C 468 nt11.97□□□□□ -0.49
RPS27BP38711 RKM5YLR137W 1104 nt11.96□□□□□ -0.49
RPS27BP38711 FPR4YLR449W 1179 nt11.96□□□□□ -0.49
RPS27BP38711 YOL037CYOL037C 354 nt11.95□□□□□ -0.5
RPS27BP38711 YBL100CYBL100C 315 nt11.92□□□□□ -0.5
RPS27BP38711 LSM3YLR438C-A 270 nt11.9□□□□□ -0.5
RPS27BP38711 PHO4YFR034C 939 nt11.88□□□□□ -0.51
RPS27BP38711 FUN26YAL022C 1554 nt11.79□□□□□ -0.52
RPS27BP38711 TRM9YML014W 840 nt11.78□□□□□ -0.52
RPS27BP38711 tM(CAU)CtM(CAU)C 72 nt11.74□□□□□ -0.53
RPS27BP38711 IMT4tM(CAU)E 72 nt11.74□□□□□ -0.53
RPS27BP38711 IMT3tM(CAU)J3 72 nt11.74□□□□□ -0.53
RPS27BP38711 IMT1tM(CAU)O1 72 nt11.74□□□□□ -0.53
RPS27BP38711 IMT2tM(CAU)P 72 nt11.74□□□□□ -0.53
RPS27BP38711 YLR281CYLR281C 468 nt11.67□□□□□ -0.54
RPS27BP38711 CCT6YDR188W 1641 nt11.67□□□□□ -0.54
RPS27BP38711 WHI5YOR083W 888 nt11.62□□□□□ -0.55
RPS27BP38711 PUS2YGL063W 1113 nt11.61□□□□□ -0.55
RPS27BP38711 YPS1YLR120C 1710 nt11.6□□□□□ -0.55
RPS27BP38711 ALF1YNL148C 765 nt11.57□□□□□ -0.56
RPS27BP38711 YDR095CYDR095C 411 nt11.55□□□□□ -0.56
RPS27BP38711 SUF2tP(AGG)C 72 nt11.54□□□□□ -0.56
RPS27BP38711 SUF10tP(AGG)N 72 nt11.54□□□□□ -0.56
RPS27BP38711 YLR154C-GYLR154C-G 150 nt11.49□□□□□ -0.57
RPS27BP38711 SPT5YML010W 3192 nt11.46□□□□□ -0.58
RPS27BP38711 YHR165W-AYHR165W-A 312 nt11.45□□□□□ -0.58
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms